Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_01320 and AO353_01325 are separated by 238 nucleotides AO353_01325 and AO353_01330 are separated by 12 nucleotides AO353_01330 and AO353_01335 are separated by 42 nucleotides
AO353_01320: AO353_01320 - class V aminotransferase, at 286,023 to 287,156
_01320
AO353_01325: AO353_01325 - hydrolase TatD, at 287,395 to 288,183
_01325
AO353_01330: AO353_01330 - pilus assembly protein PilZ, at 288,196 to 288,552
_01330
AO353_01335: AO353_01335 - DNA polymerase III subunit delta', at 288,595 to 289,581
_01335
Position (kb) 287
288
289 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 286.605 kb on + strand, within AO353_01320 at 286.605 kb on + strand, within AO353_01320 at 286.605 kb on + strand, within AO353_01320 at 286.606 kb on - strand, within AO353_01320 at 286.606 kb on - strand, within AO353_01320 at 286.606 kb on - strand, within AO353_01320 at 286.606 kb on - strand, within AO353_01320 at 286.606 kb on - strand, within AO353_01320 at 286.606 kb on - strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.678 kb on + strand, within AO353_01320 at 286.678 kb on + strand, within AO353_01320 at 286.678 kb on + strand, within AO353_01320 at 286.678 kb on + strand, within AO353_01320 at 286.678 kb on + strand, within AO353_01320 at 286.679 kb on - strand, within AO353_01320 at 286.679 kb on - strand, within AO353_01320 at 286.679 kb on - strand, within AO353_01320 at 286.749 kb on + strand, within AO353_01320 at 286.749 kb on + strand, within AO353_01320 at 286.750 kb on - strand, within AO353_01320 at 286.750 kb on - strand, within AO353_01320 at 286.942 kb on + strand, within AO353_01320 at 287.023 kb on - strand, within AO353_01320 at 287.023 kb on - strand, within AO353_01320 at 287.095 kb on - strand at 287.095 kb on - strand at 287.110 kb on + strand at 287.111 kb on - strand at 287.111 kb on - strand at 287.111 kb on - strand at 287.177 kb on + strand at 287.178 kb on - strand at 287.178 kb on - strand at 287.178 kb on - strand at 287.178 kb on - strand at 287.227 kb on + strand at 287.228 kb on - strand at 287.228 kb on - strand at 287.237 kb on + strand at 287.237 kb on + strand at 287.237 kb on + strand at 287.238 kb on - strand at 287.238 kb on - strand at 287.238 kb on - strand at 287.238 kb on - strand at 287.287 kb on + strand at 287.287 kb on + strand at 287.288 kb on - strand at 287.302 kb on + strand at 287.303 kb on - strand at 287.313 kb on + strand at 287.313 kb on + strand at 287.313 kb on + strand at 287.314 kb on - strand at 287.319 kb on + strand at 287.319 kb on + strand at 287.319 kb on + strand at 287.320 kb on - strand at 287.320 kb on - strand at 287.445 kb on + strand at 287.446 kb on - strand at 287.469 kb on - strand at 287.469 kb on - strand at 287.516 kb on + strand, within AO353_01325 at 287.517 kb on - strand, within AO353_01325 at 287.562 kb on - strand, within AO353_01325 at 287.562 kb on - strand, within AO353_01325 at 287.664 kb on + strand, within AO353_01325 at 287.664 kb on + strand, within AO353_01325 at 287.665 kb on - strand, within AO353_01325 at 287.666 kb on + strand, within AO353_01325 at 287.667 kb on - strand, within AO353_01325 at 287.667 kb on - strand, within AO353_01325 at 287.769 kb on + strand, within AO353_01325 at 287.879 kb on + strand, within AO353_01325 at 287.879 kb on + strand, within AO353_01325 at 287.885 kb on + strand, within AO353_01325 at 287.886 kb on - strand, within AO353_01325 at 288.018 kb on - strand, within AO353_01325 at 288.175 kb on + strand at 288.175 kb on + strand at 288.175 kb on + strand at 288.176 kb on - strand at 288.176 kb on - strand at 288.183 kb on + strand at 288.183 kb on + strand at 288.183 kb on + strand at 288.183 kb on + strand at 288.184 kb on - strand at 288.184 kb on - strand at 288.184 kb on - strand at 288.197 kb on + strand at 288.197 kb on + strand at 288.197 kb on + strand at 288.197 kb on + strand at 288.197 kb on + strand at 288.197 kb on + strand at 288.197 kb on + strand at 288.197 kb on + strand at 288.198 kb on - strand at 288.198 kb on - strand at 288.198 kb on - strand at 288.198 kb on - strand at 288.198 kb on - strand at 288.198 kb on - strand at 288.198 kb on - strand at 288.198 kb on - strand at 288.198 kb on - strand at 288.198 kb on - strand at 288.198 kb on - strand at 288.204 kb on + strand at 288.204 kb on + strand at 288.204 kb on + strand at 288.204 kb on + strand at 288.204 kb on + strand at 288.204 kb on + strand at 288.204 kb on + strand at 288.204 kb on + strand at 288.204 kb on + strand at 288.204 kb on + strand at 288.204 kb on + strand at 288.204 kb on + strand at 288.205 kb on - strand at 288.205 kb on - strand at 288.205 kb on - strand at 288.205 kb on - strand at 288.205 kb on - strand at 288.205 kb on - strand at 288.205 kb on - strand at 288.205 kb on - strand at 288.205 kb on - strand at 288.205 kb on - strand at 288.205 kb on - strand at 288.205 kb on - strand at 288.205 kb on - strand at 288.205 kb on - strand at 288.242 kb on + strand, within AO353_01330 at 288.242 kb on + strand, within AO353_01330 at 288.334 kb on - strand, within AO353_01330 at 288.400 kb on + strand, within AO353_01330 at 288.400 kb on + strand, within AO353_01330 at 288.401 kb on - strand, within AO353_01330 at 288.419 kb on + strand, within AO353_01330 at 288.419 kb on + strand, within AO353_01330 at 288.419 kb on + strand, within AO353_01330 at 288.419 kb on + strand, within AO353_01330 at 288.419 kb on + strand, within AO353_01330 at 288.420 kb on - strand, within AO353_01330 at 288.420 kb on - strand, within AO353_01330 at 288.470 kb on + strand, within AO353_01330 at 288.470 kb on + strand, within AO353_01330 at 288.470 kb on + strand, within AO353_01330 at 288.470 kb on + strand, within AO353_01330 at 288.470 kb on + strand, within AO353_01330 at 288.471 kb on - strand, within AO353_01330 at 288.471 kb on - strand, within AO353_01330 at 288.471 kb on - strand, within AO353_01330 at 288.471 kb on - strand, within AO353_01330 at 288.471 kb on - strand at 288.471 kb on - strand, within AO353_01330 at 288.471 kb on - strand, within AO353_01330 at 288.471 kb on - strand, within AO353_01330 at 288.479 kb on + strand, within AO353_01330 at 288.582 kb on + strand at 288.582 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 286,605 + AO353_01320 0.51 +0.9 286,605 + AO353_01320 0.51 -0.1 286,605 + AO353_01320 0.51 +0.5 286,606 - AO353_01320 0.51 -0.9 286,606 - AO353_01320 0.51 +1.9 286,606 - AO353_01320 0.51 +2.5 286,606 - AO353_01320 0.51 -0.9 286,606 - AO353_01320 0.51 +1.7 286,606 - AO353_01320 0.51 -1.9 286,674 + AO353_01320 0.57 -0.8 286,674 + AO353_01320 0.57 -0.7 286,674 + AO353_01320 0.57 -2.7 286,674 + AO353_01320 0.57 +0.5 286,674 + AO353_01320 0.57 +0.6 286,674 + AO353_01320 0.57 -1.1 286,674 + AO353_01320 0.57 +0.5 286,674 + AO353_01320 0.57 +0.6 286,674 + AO353_01320 0.57 -0.1 286,674 + AO353_01320 0.57 +1.1 286,674 + AO353_01320 0.57 -1.1 286,674 + AO353_01320 0.57 -0.5 286,674 + AO353_01320 0.57 +1.5 286,674 + AO353_01320 0.57 +0.9 286,674 + AO353_01320 0.57 -0.1 286,674 + AO353_01320 0.57 +0.5 286,674 + AO353_01320 0.57 +0.5 286,674 + AO353_01320 0.57 +1.1 286,674 + AO353_01320 0.57 -0.5 286,674 + AO353_01320 0.57 -0.1 286,674 + AO353_01320 0.57 -0.7 286,674 + AO353_01320 0.57 -0.1 286,674 + AO353_01320 0.57 +1.4 286,674 + AO353_01320 0.57 +1.9 286,674 + AO353_01320 0.57 +1.9 286,674 + AO353_01320 0.57 -0.5 286,674 + AO353_01320 0.57 -0.1 286,674 + AO353_01320 0.57 -1.4 286,675 - AO353_01320 0.57 -0.1 286,675 - AO353_01320 0.57 +2.5 286,675 - AO353_01320 0.57 +0.6 286,675 - AO353_01320 0.57 +1.7 286,675 - AO353_01320 0.57 +2.9 286,675 - AO353_01320 0.57 +0.2 286,675 - AO353_01320 0.57 -0.9 286,675 - AO353_01320 0.57 -0.1 286,675 - AO353_01320 0.57 -0.1 286,675 - AO353_01320 0.57 -0.6 286,675 - AO353_01320 0.57 -0.1 286,675 - AO353_01320 0.57 +3.1 286,675 - AO353_01320 0.57 -0.1 286,675 - AO353_01320 0.57 +0.3 286,675 - AO353_01320 0.57 -0.3 286,675 - AO353_01320 0.57 -1.1 286,675 - AO353_01320 0.57 -0.1 286,675 - AO353_01320 0.57 +0.7 286,675 - AO353_01320 0.57 +0.9 286,675 - AO353_01320 0.57 -1.5 286,675 - AO353_01320 0.57 +2.5 286,675 - AO353_01320 0.57 +0.9 286,675 - AO353_01320 0.57 +1.6 286,675 - AO353_01320 0.57 -0.1 286,678 + AO353_01320 0.58 +1.5 286,678 + AO353_01320 0.58 -0.7 286,678 + AO353_01320 0.58 +0.3 286,678 + AO353_01320 0.58 -0.8 286,678 + AO353_01320 0.58 -0.3 286,679 - AO353_01320 0.58 +0.5 286,679 - AO353_01320 0.58 -1.7 286,679 - AO353_01320 0.58 +0.5 286,749 + AO353_01320 0.64 -0.4 286,749 + AO353_01320 0.64 +0.5 286,750 - AO353_01320 0.64 +0.9 286,750 - AO353_01320 0.64 -0.1 286,942 + AO353_01320 0.81 +0.6 287,023 - AO353_01320 0.88 -0.1 287,023 - AO353_01320 0.88 +1.7 287,095 - +1.9 287,095 - +1.9 287,110 + +0.2 287,111 - +0.5 287,111 - -0.1 287,111 - +0.4 287,177 + +0.7 287,178 - +0.2 287,178 - +1.7 287,178 - +1.1 287,178 - -1.1 287,227 + +1.6 287,228 - +1.5 287,228 - +0.6 287,237 + +0.1 287,237 + +0.7 287,237 + -1.7 287,238 - +0.1 287,238 - +1.9 287,238 - -0.7 287,238 - -0.6 287,287 + +0.2 287,287 + +0.1 287,288 - -0.1 287,302 + +2.5 287,303 - -2.1 287,313 + -0.1 287,313 + +1.5 287,313 + +0.9 287,314 - -0.7 287,319 + +0.3 287,319 + +0.5 287,319 + +2.2 287,320 - +0.2 287,320 - -0.5 287,445 + +1.5 287,446 - -0.1 287,469 - -0.1 287,469 - +0.5 287,516 + AO353_01325 0.15 +2.1 287,517 - AO353_01325 0.15 -0.1 287,562 - AO353_01325 0.21 -2.4 287,562 - AO353_01325 0.21 -1.1 287,664 + AO353_01325 0.34 +2.5 287,664 + AO353_01325 0.34 +0.9 287,665 - AO353_01325 0.34 +0.5 287,666 + AO353_01325 0.34 +1.1 287,667 - AO353_01325 0.34 +2.2 287,667 - AO353_01325 0.34 -2.1 287,769 + AO353_01325 0.47 -2.4 287,879 + AO353_01325 0.61 -1.4 287,879 + AO353_01325 0.61 +0.9 287,885 + AO353_01325 0.62 -0.4 287,886 - AO353_01325 0.62 -1.9 288,018 - AO353_01325 0.79 -0.1 288,175 + +1.1 288,175 + +0.5 288,175 + +1.1 288,176 - -0.1 288,176 - +0.9 288,183 + +0.9 288,183 + -0.3 288,183 + -0.6 288,183 + +2.5 288,184 - -1.1 288,184 - +1.1 288,184 - -0.1 288,197 + -0.3 288,197 + +0.9 288,197 + +0.9 288,197 + +0.7 288,197 + +1.1 288,197 + +0.1 288,197 + -1.1 288,197 + +0.5 288,198 - +0.3 288,198 - -0.7 288,198 - +1.3 288,198 - +0.5 288,198 - +0.6 288,198 - -0.1 288,198 - +0.6 288,198 - +1.2 288,198 - +1.5 288,198 - -0.1 288,198 - +0.6 288,204 + +1.5 288,204 + -0.1 288,204 + -0.7 288,204 + +0.6 288,204 + +0.5 288,204 + +2.2 288,204 + +0.9 288,204 + +2.2 288,204 + -0.1 288,204 + -1.1 288,204 + -0.3 288,204 + +1.1 288,205 - -0.5 288,205 - -0.1 288,205 - +0.2 288,205 - -0.4 288,205 - -1.1 288,205 - -0.1 288,205 - +1.1 288,205 - -1.1 288,205 - +0.5 288,205 - +0.7 288,205 - -0.1 288,205 - +1.9 288,205 - +1.2 288,205 - +0.5 288,242 + AO353_01330 0.13 -0.3 288,242 + AO353_01330 0.13 +0.5 288,334 - AO353_01330 0.39 -0.1 288,400 + AO353_01330 0.57 +0.5 288,400 + AO353_01330 0.57 +1.5 288,401 - AO353_01330 0.57 +0.6 288,419 + AO353_01330 0.62 +1.5 288,419 + AO353_01330 0.62 -1.7 288,419 + AO353_01330 0.62 +2.2 288,419 + AO353_01330 0.62 +0.5 288,419 + AO353_01330 0.62 +1.2 288,420 - AO353_01330 0.63 -0.7 288,420 - AO353_01330 0.63 -1.7 288,470 + AO353_01330 0.77 +0.2 288,470 + AO353_01330 0.77 +0.6 288,470 + AO353_01330 0.77 -1.1 288,470 + AO353_01330 0.77 -1.4 288,470 + AO353_01330 0.77 +0.9 288,471 - AO353_01330 0.77 -1.1 288,471 - AO353_01330 0.77 +0.9 288,471 - AO353_01330 0.77 +1.2 288,471 - AO353_01330 0.77 +0.2 288,471 - -0.1 288,471 - AO353_01330 0.77 -1.1 288,471 - AO353_01330 0.77 -0.9 288,471 - AO353_01330 0.77 -0.4 288,479 + AO353_01330 0.79 +0.2 288,582 + -0.7 288,582 + +1.6
Or see this region's nucleotide sequence