Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS10330

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
2,287,883	+		ABZR86_RS10325	0.60	+0.4
2,287,883	+		ABZR86_RS10325	0.60	-0.1
2,287,883	+		ABZR86_RS10325	0.60	+0.2
2,287,883	+		ABZR86_RS10325	0.60	+0.2
2,287,884	-		ABZR86_RS10325	0.60	-0.1
2,287,884	-		ABZR86_RS10325	0.60	-0.9
2,287,888	-		ABZR86_RS10325	0.60	+0.5
2,287,961	+		ABZR86_RS10325	0.63	+0.0
2,287,962	-		ABZR86_RS10325	0.63	-0.1
2,288,045	+		ABZR86_RS10325	0.66	-0.1
2,288,102	+		ABZR86_RS10325	0.69	-0.2
2,288,103	-		ABZR86_RS10325	0.69	-0.1
2,288,103	-		ABZR86_RS10325	0.69	-0.2
2,288,108	+		ABZR86_RS10325	0.69	-0.5
2,288,108	+		ABZR86_RS10325	0.69	+0.3
2,288,109	-		ABZR86_RS10325	0.69	+1.0
2,288,109	-		ABZR86_RS10325	0.69	-1.7
2,288,157	-		ABZR86_RS10325	0.71	+0.7
2,288,165	+		ABZR86_RS10325	0.71	-0.3
2,288,255	+		ABZR86_RS10325	0.75	-0.6
2,288,255	+		ABZR86_RS10325	0.75	+0.0
2,288,256	-		ABZR86_RS10325	0.75	+0.5
2,288,319	-		ABZR86_RS10325	0.77	-0.5
2,288,363	+		ABZR86_RS10325	0.79	+0.2
2,288,400	+		ABZR86_RS10325	0.81	-0.8
2,288,430	-		ABZR86_RS10325	0.82	+0.5
2,288,430	-		ABZR86_RS10325	0.82	+0.4
2,288,430	-		ABZR86_RS10325	0.82	-0.5
2,288,432	+		ABZR86_RS10325	0.82	+0.5
2,288,432	+		ABZR86_RS10325	0.82	+0.2
2,288,432	+		ABZR86_RS10325	0.82	-0.7
2,288,432	+		ABZR86_RS10325	0.82	-0.6
2,288,433	-		ABZR86_RS10325	0.82	-0.1
2,288,433	-		ABZR86_RS10325	0.82	-0.1
2,288,531	+		ABZR86_RS10325	0.86	+0.2
2,288,532	-		ABZR86_RS10325	0.86	+0.5
2,288,532	-		ABZR86_RS10325	0.86	-0.2
2,288,536	-		ABZR86_RS10325	0.86	+0.2
2,288,536	-		ABZR86_RS10325	0.86	+0.5
2,288,536	-		ABZR86_RS10325	0.86	-0.6
2,288,536	-		ABZR86_RS10325	0.86	-0.6
2,288,537	+		ABZR86_RS10325	0.86	+0.9
2,288,537	+		ABZR86_RS10325	0.86	+0.3
2,288,537	+		ABZR86_RS10325	0.86	+0.9
2,288,538	-		ABZR86_RS10325	0.86	+0.3
2,288,538	-		ABZR86_RS10325	0.86	-1.7
2,288,538	-		ABZR86_RS10325	0.86	+0.6
2,288,648	+				-0.2
2,288,649	-				+0.7
2,288,661	+				+0.6
2,288,661	+				+0.5
2,288,810	+				+1.2
2,288,867	+				-0.8
2,288,867	+				-0.2
2,288,867	+				+0.4
2,288,868	-				-0.4
2,288,868	-				+0.1
2,288,953	+				-0.5
2,288,953	+				-0.4
2,288,953	+				-1.1
2,288,954	-				-0.7
2,288,954	-				-0.4
2,288,955	+				+0.2
2,288,956	-				-0.0
2,288,956	-				+0.7
2,288,956	-				+0.7
2,288,996	-				+0.3
2,289,006	+				+0.5
2,289,075	+		ABZR86_RS10330	0.13	-0.0
2,289,076	-		ABZR86_RS10330	0.13	-1.5
2,289,090	+		ABZR86_RS10330	0.14	-0.0
2,289,091	-		ABZR86_RS10330	0.14	-0.2
2,289,091	-		ABZR86_RS10330	0.14	+0.2
2,289,091	-		ABZR86_RS10330	0.14	+0.1
2,289,151	-		ABZR86_RS10330	0.18	+0.2
2,289,157	-		ABZR86_RS10330	0.18	+1.1
2,289,180	+		ABZR86_RS10330	0.20	-0.4
2,289,276	+		ABZR86_RS10330	0.26	+0.8
2,289,354	+		ABZR86_RS10330	0.30	+0.7
2,289,355	-		ABZR86_RS10330	0.31	+0.9
2,289,355	-		ABZR86_RS10330	0.31	+0.3
2,289,370	+		ABZR86_RS10330	0.31	+0.2
2,289,370	+		ABZR86_RS10330	0.31	-1.2
2,289,370	+		ABZR86_RS10330	0.31	+0.3
2,289,370	+		ABZR86_RS10330	0.31	-0.1
2,289,371	-		ABZR86_RS10330	0.32	-1.4
2,289,371	-		ABZR86_RS10330	0.32	+0.4
2,289,371	-		ABZR86_RS10330	0.32	-0.8
2,289,373	-		ABZR86_RS10330	0.32	+0.1
2,289,373	-		ABZR86_RS10330	0.32	+0.1
2,289,506	+		ABZR86_RS10330	0.40	+0.0
2,289,532	-		ABZR86_RS10330	0.42	-0.0
2,289,532	-		ABZR86_RS10330	0.42	-0.5
2,289,532	-		ABZR86_RS10330	0.42	+1.1
2,289,534	+		ABZR86_RS10330	0.42	-0.3
2,289,534	+		ABZR86_RS10330	0.42	+0.1
2,289,534	+		ABZR86_RS10330	0.42	+0.6
2,289,534	+		ABZR86_RS10330	0.42	-1.0
2,289,534	+		ABZR86_RS10330	0.42	+0.1
2,289,535	-		ABZR86_RS10330	0.42	-0.1
2,289,535	-		ABZR86_RS10330	0.42	-0.6
2,289,535	-		ABZR86_RS10330	0.42	+0.3
2,289,535	-		ABZR86_RS10330	0.42	-1.6
2,289,613	+		ABZR86_RS10330	0.47	+0.0
2,289,613	+		ABZR86_RS10330	0.47	-0.5
2,289,613	+		ABZR86_RS10330	0.47	+0.1
2,289,614	-		ABZR86_RS10330	0.47	+0.2
2,289,614	-		ABZR86_RS10330	0.47	-0.2
2,289,769	-		ABZR86_RS10330	0.56	+0.8
2,289,906	+		ABZR86_RS10330	0.65	+0.9
2,289,906	+		ABZR86_RS10330	0.65	+1.9
2,289,906	+		ABZR86_RS10330	0.65	+0.1
2,290,001	-		ABZR86_RS10330	0.71	+0.8
2,290,065	+		ABZR86_RS10330	0.75	-0.5
2,290,095	+		ABZR86_RS10330	0.77	-0.2
2,290,096	-		ABZR86_RS10330	0.77	-0.0
2,290,107	+		ABZR86_RS10330	0.77	-0.1
2,290,137	+		ABZR86_RS10330	0.79	+0.9
2,290,146	+		ABZR86_RS10330	0.80	+0.9
2,290,174	+		ABZR86_RS10330	0.81	+0.2
2,290,174	+		ABZR86_RS10330	0.81	-0.6
2,290,174	+		ABZR86_RS10330	0.81	-0.6
2,290,175	-		ABZR86_RS10330	0.82	-1.5
2,290,209	+		ABZR86_RS10330	0.84	-0.2
2,290,230	+		ABZR86_RS10330	0.85	-0.2
2,290,231	-		ABZR86_RS10330	0.85	+0.1
2,290,291	-		ABZR86_RS10330	0.89	-0.7
2,290,305	+		ABZR86_RS10330	0.90	+0.4
2,290,305	+		ABZR86_RS10330	0.90	+0.1
2,290,323	+				+0.6
2,290,324	-				+0.3
2,290,324	-				-0.4
2,290,324	-				+0.4
2,290,464	+				-0.0
2,290,465	-				+1.1
2,290,465	-				+1.9
2,290,465	-				-0.0
2,290,465	-				-0.1
2,290,644	+				+0.6
2,290,645	-				-0.7
2,290,652	-				+0.7
2,290,662	-				-0.4
2,290,662	-				+0.1
2,290,662	-				-0.1
2,290,725	-				+0.0
2,290,777	-				+0.1
2,290,788	+				+0.1
2,290,811	-				-0.3
2,290,843	+				-0.1
2,290,843	+				+0.3
2,290,844	-				+0.2
2,290,844	-				+0.3
2,290,859	+				+0.2
2,291,019	-		ABZR86_RS10335	0.28	+0.1
2,291,039	+		ABZR86_RS10335	0.32	+0.4
2,291,039	+		ABZR86_RS10335	0.32	+2.5
2,291,063	+		ABZR86_RS10335	0.38	+0.7
2,291,169	-		ABZR86_RS10335	0.60	+0.2
2,291,169	-		ABZR86_RS10335	0.60	+0.2
2,291,207	+		ABZR86_RS10335	0.68	-0.4
2,291,461	-				-0.3