Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_0849

Experiment: MoYLS4 with Sisomicin 0.0078 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_0848 and DvMF_0849 are separated by 517 nucleotidesDvMF_0849 and DvMF_0850 are separated by 546 nucleotides DvMF_0848: DvMF_0848 - glucose inhibited division protein (RefSeq), at 1,024,874 to 1,025,650 _0848 DvMF_0849: DvMF_0849 - Acyl transferase (RefSeq), at 1,026,168 to 1,027,130 _0849 DvMF_0850: DvMF_0850 - arginyl-tRNA synthetase (RefSeq), at 1,027,677 to 1,029,332 _0850 Position (kb) 1026 1027 1028Strain fitness (log2 ratio) -1 0 1at 1025.260 kb on - strand, within DvMF_0848at 1025.301 kb on - strand, within DvMF_0848at 1025.653 kb on - strandat 1025.853 kb on + strandat 1025.903 kb on - strandat 1025.931 kb on - strandat 1026.114 kb on - strandat 1027.053 kb on - strandat 1027.068 kb on - strandat 1027.471 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Sisomicin 0.0078 mg/ml
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1,025,260 - DvMF_0848 0.50 -0.7
1,025,301 - DvMF_0848 0.55 -0.4
1,025,653 - -0.6
1,025,853 + +0.8
1,025,903 - -0.4
1,025,931 - -0.7
1,026,114 - -0.5
1,027,053 - -0.2
1,027,068 - -0.1
1,027,471 - -0.7

Or see this region's nucleotide sequence