Strain Fitness in Shewanella loihica PV-4 around Shew_1352

Experiment: Gelatin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gelatin (C)
1,559,289	+	flgG	Shew_1350	0.77	+3.2
1,559,413	+				+2.8
1,560,280	+				+2.0
1,560,534	-	flgI	Shew_1352	0.31	+3.0
1,560,599	+	flgI	Shew_1352	0.37	+2.8
1,560,656	-	flgI	Shew_1352	0.42	+2.6
1,560,656	-	flgI	Shew_1352	0.42	+2.6
1,561,077	-	flgI	Shew_1352	0.81	+2.4
1,561,077	-	flgI	Shew_1352	0.81	+3.3
1,561,446	+	flgJ	Shew_1353	0.11	+3.0
1,561,928	+	flgJ	Shew_1353	0.58	+1.8
1,562,229	-	flgJ	Shew_1353	0.87	+3.1