Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4038

Experiment: L-Lactate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lactate (C)
4,718,630	+		Pf6N2E2_4037	0.48	+0.2
4,718,630	+		Pf6N2E2_4037	0.48	-0.1
4,718,630	+		Pf6N2E2_4037	0.48	+0.2
4,718,630	+		Pf6N2E2_4037	0.48	-0.0
4,718,631	-		Pf6N2E2_4037	0.48	+1.2
4,718,631	-		Pf6N2E2_4037	0.48	+0.3
4,718,631	-		Pf6N2E2_4037	0.48	+0.5
4,718,631	-		Pf6N2E2_4037	0.48	+0.7
4,718,631	-		Pf6N2E2_4037	0.48	+0.1
4,718,631	-		Pf6N2E2_4037	0.48	-0.1
4,718,631	-		Pf6N2E2_4037	0.48	+0.5
4,718,631	-		Pf6N2E2_4037	0.48	+0.6
4,718,631	-		Pf6N2E2_4037	0.48	+1.3
4,718,707	+		Pf6N2E2_4037	0.57	+0.5
4,718,707	+		Pf6N2E2_4037	0.57	+0.6
4,718,707	+		Pf6N2E2_4037	0.57	+0.9
4,718,787	-		Pf6N2E2_4037	0.66	-0.2
4,718,859	+		Pf6N2E2_4037	0.74	+0.9
4,718,859	+		Pf6N2E2_4037	0.74	+0.9
4,718,859	+		Pf6N2E2_4037	0.74	+1.7
4,718,860	-		Pf6N2E2_4037	0.74	-0.1
4,718,860	-		Pf6N2E2_4037	0.74	+0.4
4,718,860	-		Pf6N2E2_4037	0.74	+0.5
4,718,860	-		Pf6N2E2_4037	0.74	-0.3
4,718,885	-		Pf6N2E2_4037	0.77	+0.5
4,718,969	-		Pf6N2E2_4037	0.86	-0.7
4,718,993	+		Pf6N2E2_4037	0.89	+0.1
4,718,994	-		Pf6N2E2_4037	0.89	-0.5
4,718,994	-		Pf6N2E2_4037	0.89	+0.9
4,718,994	-		Pf6N2E2_4037	0.89	+0.1
4,718,994	-		Pf6N2E2_4037	0.89	+1.4
4,718,997	-		Pf6N2E2_4037	0.89	+0.1
4,718,997	-		Pf6N2E2_4037	0.89	+1.0
4,718,997	-		Pf6N2E2_4037	0.89	-0.8
4,719,090	-				-0.3
4,719,115	+				+1.3
4,719,116	-				+0.1
4,719,146	+				+0.2
4,719,146	+				+0.7
4,719,146	+				+0.8
4,719,147	-				+1.7
4,719,147	-				+0.2
4,719,148	+				+1.8
4,719,148	+				+0.7
4,719,148	+				+0.4
4,719,149	-				+0.5
4,719,149	-				+0.9
4,719,149	-				+1.3
4,719,149	-				+0.3
4,719,154	+				+0.8
4,719,154	+				-0.1
4,719,155	-				+1.0
4,719,155	-				+0.8
4,719,155	-				+1.2
4,719,194	-				+2.3
4,719,194	-				+0.5
4,719,210	-				+0.7
4,719,213	+				+1.2
4,719,213	+				+0.0
4,719,214	-				+0.4
4,719,214	-				+0.3
4,719,252	+				+1.0
4,719,363	+				+0.7
4,719,363	+				+1.0
4,719,364	-				-0.8
4,719,364	-				-2.0
4,719,364	-				-1.9
4,719,364	-				+0.7
4,719,496	+				+0.4
4,719,497	-				-0.1
4,719,503	+				+0.6
4,719,503	+				+0.6
4,719,504	-				-0.8
4,719,504	-				-0.3
4,719,659	+		Pf6N2E2_4038	0.19	-1.2
4,719,660	-		Pf6N2E2_4038	0.19	-0.8
4,719,660	-		Pf6N2E2_4038	0.19	-0.5
4,719,660	-		Pf6N2E2_4038	0.19	-1.5
4,719,660	-		Pf6N2E2_4038	0.19	-0.7
4,719,660	-		Pf6N2E2_4038	0.19	-0.8
4,719,673	+		Pf6N2E2_4038	0.21	-0.3
4,719,673	+		Pf6N2E2_4038	0.21	-1.0
4,719,673	+		Pf6N2E2_4038	0.21	-0.5
4,719,673	+		Pf6N2E2_4038	0.21	+0.1
4,719,674	-		Pf6N2E2_4038	0.21	-2.3
4,719,674	-		Pf6N2E2_4038	0.21	-0.1
4,719,674	-		Pf6N2E2_4038	0.21	+0.7
4,719,674	-		Pf6N2E2_4038	0.21	+0.9
4,719,674	-		Pf6N2E2_4038	0.21	-0.5
4,719,849	+		Pf6N2E2_4038	0.35	-0.2
4,719,849	+		Pf6N2E2_4038	0.35	-1.7
4,719,850	-		Pf6N2E2_4038	0.35	+0.7
4,719,850	-		Pf6N2E2_4038	0.35	-1.9
4,719,852	+		Pf6N2E2_4038	0.35	-0.5
4,719,853	-		Pf6N2E2_4038	0.35	-0.0
4,719,882	+		Pf6N2E2_4038	0.38	+0.0
4,719,883	-		Pf6N2E2_4038	0.38	-1.8
4,719,883	-		Pf6N2E2_4038	0.38	-0.3
4,719,883	-		Pf6N2E2_4038	0.38	+0.5
4,719,883	-		Pf6N2E2_4038	0.38	-0.6
4,719,938	-		Pf6N2E2_4038	0.42	-1.2
4,719,938	-		Pf6N2E2_4038	0.42	-1.7
4,720,169	-		Pf6N2E2_4038	0.61	+0.2
4,720,169	-		Pf6N2E2_4038	0.61	-0.5
4,720,213	+		Pf6N2E2_4038	0.65	-1.0
4,720,407	+		Pf6N2E2_4038	0.80	-1.0
4,720,408	-		Pf6N2E2_4038	0.80	-0.6
4,720,514	-		Pf6N2E2_4038	0.89	-0.5
4,720,514	-		Pf6N2E2_4038	0.89	-2.0
4,720,514	-		Pf6N2E2_4038	0.89	+1.1
4,720,514	-		Pf6N2E2_4038	0.89	-0.5
4,720,635	+				-1.6
4,720,636	-				-0.5
4,720,674	+				-0.1
4,720,674	+				-0.8
4,720,674	+				-1.8
4,720,674	+				-0.3
4,720,674	+				-1.4
4,720,675	-				-0.8
4,720,675	-				-0.3
4,720,675	-				-1.3
4,720,675	-				-0.7
4,720,675	-				-1.8
4,720,675	-				-0.1
4,720,675	-				-0.4
4,720,675	-				-1.6
4,720,675	-				-1.3
4,720,675	-				-1.3
4,720,675	-				-0.3
4,720,690	+				-0.6
4,720,690	+				-0.7
4,720,690	+				+0.7
4,720,690	+				-1.3
4,720,690	+				-1.2
4,720,690	+				-1.3
4,720,690	+				+0.1
4,720,690	+				-0.4
4,720,691	-				-0.7
4,720,691	-				-2.0
4,720,691	-				-0.3
4,720,691	-				-0.4
4,720,691	-				-1.9
4,720,691	-				-1.3
4,720,691	-				-2.0
4,720,691	-				+0.7
4,720,691	-				-1.0
4,720,691	-				-0.8
4,720,691	-				-0.7
4,720,691	-				+0.1
4,720,691	-				+1.7
4,720,720	+		Pf6N2E2_4039	0.18	-1.3
4,720,720	+		Pf6N2E2_4039	0.18	-0.5
4,720,720	+		Pf6N2E2_4039	0.18	+1.0
4,720,721	-		Pf6N2E2_4039	0.18	-1.6
4,720,721	-		Pf6N2E2_4039	0.18	-1.2
4,720,721	-		Pf6N2E2_4039	0.18	-0.2
4,720,721	-		Pf6N2E2_4039	0.18	-2.0
4,720,721	-		Pf6N2E2_4039	0.18	-1.9
4,720,721	-		Pf6N2E2_4039	0.18	-0.5
4,720,721	-		Pf6N2E2_4039	0.18	-0.8
4,720,721	-		Pf6N2E2_4039	0.18	-1.1
4,720,729	+		Pf6N2E2_4039	0.20	-0.5
4,720,984	+				-0.2
4,720,984	+				-1.0
4,720,984	+				+0.3
4,720,984	+				-1.2
4,720,984	+				-0.4
4,720,984	+				-2.8
4,720,985	-				-1.3
4,720,985	-				+0.2
4,720,985	-				-1.1
4,720,985	-				-1.2
4,720,985	-				+0.5
4,720,985	-				+0.0
4,720,985	-				-1.4
4,720,985	-				-0.2
4,721,013	+				-0.6
4,721,013	+				-0.7
4,721,014	-				+0.2
4,721,014	-				+0.1
4,721,138	+		Pf6N2E2_4040	0.11	-0.5
4,721,138	+		Pf6N2E2_4040	0.11	-1.8
4,721,138	+		Pf6N2E2_4040	0.11	-1.2
4,721,138	+		Pf6N2E2_4040	0.11	-0.3
4,721,138	+		Pf6N2E2_4040	0.11	-1.5
4,721,139	-		Pf6N2E2_4040	0.11	-1.1
4,721,139	-		Pf6N2E2_4040	0.11	-1.5
4,721,139	-		Pf6N2E2_4040	0.11	+0.3
4,721,139	-		Pf6N2E2_4040	0.11	-0.3
4,721,142	+		Pf6N2E2_4040	0.11	-0.5
4,721,142	+		Pf6N2E2_4040	0.11	-0.3
4,721,142	+		Pf6N2E2_4040	0.11	+0.7
4,721,142	+		Pf6N2E2_4040	0.11	-0.8
4,721,142	+		Pf6N2E2_4040	0.11	-1.3
4,721,142	+		Pf6N2E2_4040	0.11	-1.3
4,721,142	+		Pf6N2E2_4040	0.11	-0.2
4,721,142	+		Pf6N2E2_4040	0.11	-0.8
4,721,142	+		Pf6N2E2_4040	0.11	-0.7
4,721,142	+		Pf6N2E2_4040	0.11	+0.1
4,721,142	+		Pf6N2E2_4040	0.11	-1.9
4,721,142	+		Pf6N2E2_4040	0.11	+0.2
4,721,142	+		Pf6N2E2_4040	0.11	-0.8
4,721,142	+		Pf6N2E2_4040	0.11	-1.8
4,721,142	+		Pf6N2E2_4040	0.11	-0.8
4,721,143	-		Pf6N2E2_4040	0.11	-0.3
4,721,143	-		Pf6N2E2_4040	0.11	-0.8
4,721,143	-		Pf6N2E2_4040	0.11	-0.6
4,721,143	-		Pf6N2E2_4040	0.11	+1.0
4,721,143	-		Pf6N2E2_4040	0.11	-0.4
4,721,143	-		Pf6N2E2_4040	0.11	-0.7
4,721,143	-		Pf6N2E2_4040	0.11	+1.2
4,721,143	-		Pf6N2E2_4040	0.11	-0.6
4,721,144	+		Pf6N2E2_4040	0.11	-1.4
4,721,144	+		Pf6N2E2_4040	0.11	-1.5
4,721,144	+		Pf6N2E2_4040	0.11	-0.5
4,721,145	-		Pf6N2E2_4040	0.11	-1.4
4,721,145	-		Pf6N2E2_4040	0.11	-0.7
4,721,145	-		Pf6N2E2_4040	0.11	-0.4
4,721,145	-		Pf6N2E2_4040	0.11	-1.7
4,721,469	+		Pf6N2E2_4040	0.34	-0.6
4,721,469	+		Pf6N2E2_4040	0.34	-0.5
4,721,469	+		Pf6N2E2_4040	0.34	-1.1
4,721,469	+		Pf6N2E2_4040	0.34	-2.1
4,721,469	+		Pf6N2E2_4040	0.34	+0.3
4,721,469	+		Pf6N2E2_4040	0.34	-0.8
4,721,469	+		Pf6N2E2_4040	0.34	-0.7
4,721,470	-		Pf6N2E2_4040	0.34	-0.3
4,721,470	-		Pf6N2E2_4040	0.34	-1.3
4,721,470	-		Pf6N2E2_4040	0.34	-1.4
4,721,470	-		Pf6N2E2_4040	0.34	-0.1
4,721,470	-		Pf6N2E2_4040	0.34	-0.7
4,721,470	-		Pf6N2E2_4040	0.34	-0.9
4,721,470	-		Pf6N2E2_4040	0.34	+0.9
4,721,501	-		Pf6N2E2_4040	0.36	-1.4