Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS00665

Experiment: R2A with Cadmium chloride hemipentahydrate 0.0390625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Cadmium chloride hemipentahydrate 0.0390625 mM
141,266	+		LRK54_RS00660	0.27	-0.7
141,266	+		LRK54_RS00660	0.27	-2.8
141,266	+		LRK54_RS00660	0.27	-0.2
141,266	+		LRK54_RS00660	0.27	-1.5
141,267	-		LRK54_RS00660	0.27	-1.7
141,267	-		LRK54_RS00660	0.27	-1.6
141,402	-		LRK54_RS00660	0.38	-1.6
141,402	-		LRK54_RS00660	0.38	-0.5
141,551	+		LRK54_RS00660	0.51	+0.1
141,551	+		LRK54_RS00660	0.51	-0.7
141,551	+		LRK54_RS00660	0.51	-0.1
141,551	+		LRK54_RS00660	0.51	+0.0
141,551	+		LRK54_RS00660	0.51	-0.5
141,551	+		LRK54_RS00660	0.51	+1.2
141,551	+		LRK54_RS00660	0.51	-0.5
141,551	+		LRK54_RS00660	0.51	-1.3
141,551	+		LRK54_RS00660	0.51	+1.8
141,552	-		LRK54_RS00660	0.51	+0.1
141,552	-		LRK54_RS00660	0.51	-1.5
141,552	-		LRK54_RS00660	0.51	-0.2
141,552	-		LRK54_RS00660	0.51	+1.4
141,552	-		LRK54_RS00660	0.51	+1.4
141,552	-		LRK54_RS00660	0.51	-1.1
141,552	-		LRK54_RS00660	0.51	+1.4
141,552	-		LRK54_RS00660	0.51	+0.4
141,552	-		LRK54_RS00660	0.51	+0.3
141,755	+		LRK54_RS00660	0.68	-0.2
141,755	+		LRK54_RS00660	0.68	-0.4
141,756	-		LRK54_RS00660	0.68	+0.7
141,756	-		LRK54_RS00660	0.68	+2.4
141,756	-		LRK54_RS00660	0.68	-2.6
141,756	-		LRK54_RS00660	0.68	-0.8
141,756	-		LRK54_RS00660	0.68	+0.8
141,866	+		LRK54_RS00660	0.77	-2.0
141,866	+		LRK54_RS00660	0.77	+1.8
141,866	+		LRK54_RS00660	0.77	-1.5
141,866	+		LRK54_RS00660	0.77	+1.4
141,866	+		LRK54_RS00660	0.77	-0.2
141,866	+		LRK54_RS00660	0.77	+0.7
141,866	+		LRK54_RS00660	0.77	-0.4
141,867	-		LRK54_RS00660	0.77	-1.1
141,867	-		LRK54_RS00660	0.77	-3.0
141,867	-		LRK54_RS00660	0.77	-1.1
141,867	-		LRK54_RS00660	0.77	-2.0
141,867	-		LRK54_RS00660	0.77	-0.4
141,867	-		LRK54_RS00660	0.77	-0.1
141,867	-		LRK54_RS00660	0.77	+0.8
141,867	-		LRK54_RS00660	0.77	-1.4
141,941	+		LRK54_RS00660	0.83	-2.0
141,941	+		LRK54_RS00660	0.83	-1.2
141,941	+		LRK54_RS00660	0.83	-1.4
141,941	+		LRK54_RS00660	0.83	+0.5
141,941	+		LRK54_RS00660	0.83	-0.4
141,941	+		LRK54_RS00660	0.83	-0.1
141,941	+		LRK54_RS00660	0.83	-0.6
141,941	+		LRK54_RS00660	0.83	+1.2
141,941	+		LRK54_RS00660	0.83	-0.9
141,941	+		LRK54_RS00660	0.83	-0.4
141,941	+		LRK54_RS00660	0.83	-0.7
141,941	+		LRK54_RS00660	0.83	-1.2
141,941	+		LRK54_RS00660	0.83	+0.0
141,942	-		LRK54_RS00660	0.83	-1.1
141,942	-		LRK54_RS00660	0.83	+0.0
141,942	-		LRK54_RS00660	0.83	-1.2
141,942	-		LRK54_RS00660	0.83	-0.7
141,942	-		LRK54_RS00660	0.83	-1.1
141,942	-		LRK54_RS00660	0.83	-0.8
141,942	-		LRK54_RS00660	0.83	+0.6
141,942	-		LRK54_RS00660	0.83	-0.7
141,942	-		LRK54_RS00660	0.83	+0.0
141,942	-		LRK54_RS00660	0.83	+0.0
141,995	+		LRK54_RS00660	0.88	+0.0
141,995	+		LRK54_RS00660	0.88	+0.0
141,995	+		LRK54_RS00660	0.88	-0.9
141,995	+		LRK54_RS00660	0.88	-1.3
141,995	+		LRK54_RS00660	0.88	-0.8
141,995	+		LRK54_RS00660	0.88	-1.7
141,995	+		LRK54_RS00660	0.88	+0.4
141,995	+		LRK54_RS00660	0.88	-0.4
141,995	+		LRK54_RS00660	0.88	-0.1
141,995	+		LRK54_RS00660	0.88	-0.1
141,995	+		LRK54_RS00660	0.88	-0.5
141,995	+		LRK54_RS00660	0.88	+0.9
141,995	+		LRK54_RS00660	0.88	+0.4
141,995	+		LRK54_RS00660	0.88	-1.3
141,995	+		LRK54_RS00660	0.88	+0.3
141,995	+		LRK54_RS00660	0.88	-0.6
141,995	+		LRK54_RS00660	0.88	+0.6
141,995	+		LRK54_RS00660	0.88	-0.1
141,995	+		LRK54_RS00660	0.88	+0.3
141,995	+		LRK54_RS00660	0.88	-0.5
141,995	+		LRK54_RS00660	0.88	-1.1
141,995	+		LRK54_RS00660	0.88	+0.2
141,995	+		LRK54_RS00660	0.88	-1.1
141,996	-		LRK54_RS00660	0.88	-0.8
141,996	-		LRK54_RS00660	0.88	-0.5
141,996	-		LRK54_RS00660	0.88	+0.0
141,996	-		LRK54_RS00660	0.88	-2.3
141,996	-		LRK54_RS00660	0.88	-1.5
141,996	-		LRK54_RS00660	0.88	+0.9
141,996	-		LRK54_RS00660	0.88	-0.7
141,996	-		LRK54_RS00660	0.88	-0.6
141,996	-		LRK54_RS00660	0.88	-2.0
141,996	-		LRK54_RS00660	0.88	+0.7
141,996	-		LRK54_RS00660	0.88	-2.0
141,996	-		LRK54_RS00660	0.88	+0.8
141,996	-		LRK54_RS00660	0.88	-0.4
141,996	-		LRK54_RS00660	0.88	-1.3
141,996	-		LRK54_RS00660	0.88	+0.2
141,996	-		LRK54_RS00660	0.88	-0.0
141,996	-		LRK54_RS00660	0.88	-1.8
141,996	-		LRK54_RS00660	0.88	+1.3
141,996	-		LRK54_RS00660	0.88	-0.4
141,996	-		LRK54_RS00660	0.88	+1.0
141,996	-		LRK54_RS00660	0.88	+0.4
141,996	-		LRK54_RS00660	0.88	-1.4
141,996	-		LRK54_RS00660	0.88	+1.4
141,996	-		LRK54_RS00660	0.88	-1.1
141,996	-		LRK54_RS00660	0.88	-1.1
141,996	-		LRK54_RS00660	0.88	+0.4
141,996	-		LRK54_RS00660	0.88	+0.5
141,996	-		LRK54_RS00660	0.88	+0.3
141,996	-		LRK54_RS00660	0.88	-1.5
141,996	-		LRK54_RS00660	0.88	-1.6
141,996	-		LRK54_RS00660	0.88	-2.0
141,996	-		LRK54_RS00660	0.88	-0.5
141,996	-		LRK54_RS00660	0.88	-1.0
141,996	-		LRK54_RS00660	0.88	-1.0
141,998	-		LRK54_RS00660	0.88	-1.3
142,013	+		LRK54_RS00660	0.89	+0.3
142,013	+		LRK54_RS00660	0.89	-2.2
142,013	+		LRK54_RS00660	0.89	+0.7
142,014	-		LRK54_RS00660	0.89	-0.6
142,014	-		LRK54_RS00660	0.89	-2.1
142,014	-		LRK54_RS00660	0.89	-0.4
142,014	-		LRK54_RS00660	0.89	-0.1
142,069	+				-0.0
142,069	+				+0.4
142,070	-				-0.6
142,070	-				+0.8
142,215	+				-1.3
142,216	-				+0.5
142,216	-				+1.8
142,378	+		LRK54_RS00665	0.21	+0.5
142,378	+		LRK54_RS00665	0.21	-0.0
142,379	-		LRK54_RS00665	0.21	+0.5
142,379	-		LRK54_RS00665	0.21	-1.2
142,403	+		LRK54_RS00665	0.24	-1.5
142,403	+		LRK54_RS00665	0.24	+0.9
142,403	+		LRK54_RS00665	0.24	+0.8
142,403	+		LRK54_RS00665	0.24	-0.5
142,403	+		LRK54_RS00665	0.24	-0.4
142,404	-		LRK54_RS00665	0.24	+1.4
142,404	-		LRK54_RS00665	0.24	+1.0
142,404	-		LRK54_RS00665	0.24	+0.4
142,404	-		LRK54_RS00665	0.24	-0.3
142,404	-		LRK54_RS00665	0.24	+0.2
142,545	+		LRK54_RS00665	0.42	-1.2
142,545	+		LRK54_RS00665	0.42	+0.6
142,545	+		LRK54_RS00665	0.42	+1.1
142,545	+		LRK54_RS00665	0.42	+0.9
142,545	+		LRK54_RS00665	0.42	-0.1
142,545	+		LRK54_RS00665	0.42	-0.3
142,545	+		LRK54_RS00665	0.42	-0.3
142,545	+		LRK54_RS00665	0.42	+0.5
142,545	+		LRK54_RS00665	0.42	+0.0
142,545	+		LRK54_RS00665	0.42	+1.2
142,545	+		LRK54_RS00665	0.42	+1.0
142,545	+		LRK54_RS00665	0.42	+0.3
142,545	+		LRK54_RS00665	0.42	+0.2
142,545	+		LRK54_RS00665	0.42	+0.6
142,545	+		LRK54_RS00665	0.42	+0.8
142,545	+		LRK54_RS00665	0.42	+0.5
142,546	-		LRK54_RS00665	0.42	+0.1
142,546	-		LRK54_RS00665	0.42	+1.1
142,546	-		LRK54_RS00665	0.42	-0.4
142,546	-		LRK54_RS00665	0.42	-0.3
142,546	-		LRK54_RS00665	0.42	-0.2
142,546	-		LRK54_RS00665	0.42	+0.1
142,546	-		LRK54_RS00665	0.42	+0.4
142,546	-		LRK54_RS00665	0.42	-0.8
142,546	-		LRK54_RS00665	0.42	+0.5
142,546	-		LRK54_RS00665	0.42	+0.0
142,546	-		LRK54_RS00665	0.42	-0.8
142,546	-		LRK54_RS00665	0.42	-0.5
142,546	-		LRK54_RS00665	0.42	+0.8
142,546	-		LRK54_RS00665	0.42	+0.1
142,546	-		LRK54_RS00665	0.42	+0.0
142,546	-		LRK54_RS00665	0.42	-1.5
142,689	+		LRK54_RS00665	0.60	+0.5
142,689	+		LRK54_RS00665	0.60	-1.9
142,689	+		LRK54_RS00665	0.60	+0.4
142,689	+		LRK54_RS00665	0.60	-0.8
142,689	+		LRK54_RS00665	0.60	-2.0
142,689	+		LRK54_RS00665	0.60	+0.6
142,689	+		LRK54_RS00665	0.60	-0.2
142,689	+		LRK54_RS00665	0.60	+0.9
142,689	+		LRK54_RS00665	0.60	-0.4
142,689	+		LRK54_RS00665	0.60	+0.3
142,690	-		LRK54_RS00665	0.60	-1.0
142,690	-		LRK54_RS00665	0.60	+2.6
142,690	-		LRK54_RS00665	0.60	-0.5
142,690	-		LRK54_RS00665	0.60	+1.4
142,690	-		LRK54_RS00665	0.60	-1.1
142,690	-		LRK54_RS00665	0.60	+0.8
142,690	-		LRK54_RS00665	0.60	-1.0
142,690	-		LRK54_RS00665	0.60	-0.3
142,690	-		LRK54_RS00665	0.60	-1.0
142,690	-		LRK54_RS00665	0.60	+0.7
142,758	+		LRK54_RS00665	0.69	+0.6
142,758	+		LRK54_RS00665	0.69	+0.0
142,758	+		LRK54_RS00665	0.69	+0.3
142,758	+		LRK54_RS00665	0.69	+0.6
142,758	+		LRK54_RS00665	0.69	-0.2
142,758	+		LRK54_RS00665	0.69	-0.1
142,758	+		LRK54_RS00665	0.69	+0.7
142,758	+		LRK54_RS00665	0.69	-1.3
142,758	+		LRK54_RS00665	0.69	+0.0
142,758	+		LRK54_RS00665	0.69	+0.2
142,758	+		LRK54_RS00665	0.69	-0.0
142,758	+		LRK54_RS00665	0.69	+0.7
142,758	+		LRK54_RS00665	0.69	-1.2
142,758	+		LRK54_RS00665	0.69	+0.6
142,758	+		LRK54_RS00665	0.69	-0.3
142,758	+		LRK54_RS00665	0.69	-1.0
142,758	+		LRK54_RS00665	0.69	-0.2
142,758	+		LRK54_RS00665	0.69	-0.3
142,758	+		LRK54_RS00665	0.69	-1.2
142,758	+		LRK54_RS00665	0.69	-0.2
142,758	+		LRK54_RS00665	0.69	+0.3
142,758	+		LRK54_RS00665	0.69	-0.6
142,758	+		LRK54_RS00665	0.69	-1.2
142,758	+		LRK54_RS00665	0.69	-0.3
142,758	+		LRK54_RS00665	0.69	-0.4
142,758	+		LRK54_RS00665	0.69	-1.2
142,758	+		LRK54_RS00665	0.69	+0.0
142,758	+		LRK54_RS00665	0.69	-0.1
142,758	+		LRK54_RS00665	0.69	-0.3
142,758	+		LRK54_RS00665	0.69	+0.8
142,758	+		LRK54_RS00665	0.69	+1.1
142,758	+		LRK54_RS00665	0.69	+0.1
142,759	-		LRK54_RS00665	0.69	+0.2
142,759	-		LRK54_RS00665	0.69	-0.5
142,759	-		LRK54_RS00665	0.69	+0.7
142,759	-		LRK54_RS00665	0.69	+0.7
142,759	-		LRK54_RS00665	0.69	-0.8
142,759	-		LRK54_RS00665	0.69	-1.9
142,759	-		LRK54_RS00665	0.69	-1.8
142,759	-		LRK54_RS00665	0.69	-0.3
142,759	-		LRK54_RS00665	0.69	+0.4
142,759	-		LRK54_RS00665	0.69	+0.3
142,759	-		LRK54_RS00665	0.69	-0.1
142,759	-		LRK54_RS00665	0.69	+1.8
142,759	-		LRK54_RS00665	0.69	-1.2
142,759	-		LRK54_RS00665	0.69	-0.6
142,759	-		LRK54_RS00665	0.69	-0.4
142,759	-		LRK54_RS00665	0.69	-2.1
142,759	-		LRK54_RS00665	0.69	-0.4
142,759	-		LRK54_RS00665	0.69	+0.4
142,759	-		LRK54_RS00665	0.69	-0.4
142,759	-		LRK54_RS00665	0.69	-1.2
142,759	-		LRK54_RS00665	0.69	-0.9
142,759	-		LRK54_RS00665	0.69	+0.5
142,759	-		LRK54_RS00665	0.69	-0.3
142,759	-		LRK54_RS00665	0.69	-0.6
142,759	-		LRK54_RS00665	0.69	+0.4
142,759	-		LRK54_RS00665	0.69	+0.8
142,759	-		LRK54_RS00665	0.69	+0.3
142,759	-		LRK54_RS00665	0.69	+0.0
142,759	-		LRK54_RS00665	0.69	+0.1
142,759	-		LRK54_RS00665	0.69	+0.6
142,759	-		LRK54_RS00665	0.69	-0.1
142,764	+		LRK54_RS00665	0.70	+0.1
142,764	+		LRK54_RS00665	0.70	-1.4
142,764	+		LRK54_RS00665	0.70	-0.7
142,764	+		LRK54_RS00665	0.70	+0.3
142,764	+		LRK54_RS00665	0.70	+1.0
142,764	+		LRK54_RS00665	0.70	+0.1
142,764	+		LRK54_RS00665	0.70	-0.4
142,764	+		LRK54_RS00665	0.70	-0.2
142,764	+		LRK54_RS00665	0.70	+0.3
142,764	+		LRK54_RS00665	0.70	+0.2
142,764	+		LRK54_RS00665	0.70	+0.3
142,764	+		LRK54_RS00665	0.70	-2.4
142,764	+		LRK54_RS00665	0.70	-0.2
142,764	+		LRK54_RS00665	0.70	+0.7
142,764	+		LRK54_RS00665	0.70	-0.9
142,764	+		LRK54_RS00665	0.70	+0.7
142,764	+		LRK54_RS00665	0.70	-0.4
142,765	-		LRK54_RS00665	0.70	-1.2
142,765	-		LRK54_RS00665	0.70	-0.3
142,765	-		LRK54_RS00665	0.70	-0.6
142,765	-		LRK54_RS00665	0.70	-0.6
142,765	-		LRK54_RS00665	0.70	+1.4
142,765	-		LRK54_RS00665	0.70	-0.4
142,765	-		LRK54_RS00665	0.70	-1.5
142,765	-		LRK54_RS00665	0.70	-0.7
142,765	-		LRK54_RS00665	0.70	+0.8
142,765	-		LRK54_RS00665	0.70	-0.0
142,765	-		LRK54_RS00665	0.70	-0.2
142,765	-		LRK54_RS00665	0.70	+0.6
142,765	-		LRK54_RS00665	0.70	+0.7
142,765	-		LRK54_RS00665	0.70	-1.1
142,765	-		LRK54_RS00665	0.70	+0.0
142,765	-		LRK54_RS00665	0.70	-1.0
142,765	-		LRK54_RS00665	0.70	-1.8
142,765	-		LRK54_RS00665	0.70	+0.4
142,765	-		LRK54_RS00665	0.70	-0.5
142,765	-		LRK54_RS00665	0.70	+0.5
142,765	-		LRK54_RS00665	0.70	-1.1
142,765	-		LRK54_RS00665	0.70	-0.3
142,830	+		LRK54_RS00665	0.78	-0.6
142,830	+		LRK54_RS00665	0.78	+1.4
142,831	-		LRK54_RS00665	0.78	+0.6
143,009	-				-1.1
143,013	+				+1.0
143,013	+				+0.0
143,013	+				+0.4
143,013	+				-0.5
143,014	-				+0.3
143,014	-				+0.5
143,070	+				-0.8
143,071	-				-0.1
143,125	+				-0.8
143,125	+				+1.6
143,125	+				-1.0
143,126	-				-1.0
143,126	-				-1.7
143,126	-				+0.9
143,126	-				-1.5
143,260	+		LRK54_RS00670	0.12	-1.2
143,260	+		LRK54_RS00670	0.12	-0.6
143,260	+		LRK54_RS00670	0.12	+1.4
143,260	+		LRK54_RS00670	0.12	+0.0
143,260	+		LRK54_RS00670	0.12	+0.8
143,260	+		LRK54_RS00670	0.12	+0.4
143,260	+		LRK54_RS00670	0.12	-0.2
143,260	+		LRK54_RS00670	0.12	+1.4
143,260	+		LRK54_RS00670	0.12	+0.8
143,260	+		LRK54_RS00670	0.12	+0.0
143,261	-		LRK54_RS00670	0.12	-0.2
143,261	-		LRK54_RS00670	0.12	+1.8
143,261	-		LRK54_RS00670	0.12	-0.6
143,261	-		LRK54_RS00670	0.12	-1.3
143,261	-		LRK54_RS00670	0.12	-0.2
143,261	-		LRK54_RS00670	0.12	+0.0
143,266	+		LRK54_RS00670	0.13	+1.4
143,266	+		LRK54_RS00670	0.13	-1.1
143,266	+		LRK54_RS00670	0.13	+0.4
143,267	-		LRK54_RS00670	0.13	-0.5
143,267	-		LRK54_RS00670	0.13	-0.6
143,267	-		LRK54_RS00670	0.13	+0.4
143,267	-		LRK54_RS00670	0.13	-1.2
143,267	-		LRK54_RS00670	0.13	-0.8
143,305	+		LRK54_RS00670	0.16	-0.4
143,305	+		LRK54_RS00670	0.16	-0.3
143,305	+		LRK54_RS00670	0.16	-0.6
143,305	+		LRK54_RS00670	0.16	+0.8
143,306	-		LRK54_RS00670	0.16	-1.2
143,306	-		LRK54_RS00670	0.16	-0.6
143,333	-		LRK54_RS00670	0.19	+1.4
143,467	+		LRK54_RS00670	0.30	-1.3
143,467	+		LRK54_RS00670	0.30	+0.0
143,467	+		LRK54_RS00670	0.30	-1.0
143,468	-		LRK54_RS00670	0.31	-0.2
143,468	-		LRK54_RS00670	0.31	-1.0
143,468	-		LRK54_RS00670	0.31	-1.0
143,882	-		LRK54_RS00670	0.67	+0.8
143,882	-		LRK54_RS00670	0.67	-1.1
143,911	+		LRK54_RS00670	0.70	-1.0
143,911	+		LRK54_RS00670	0.70	-0.4
143,911	+		LRK54_RS00670	0.70	-0.6
143,912	-		LRK54_RS00670	0.70	+0.0
143,912	-		LRK54_RS00670	0.70	-0.4
143,912	-		LRK54_RS00670	0.70	+0.4
143,940	-		LRK54_RS00670	0.73	-0.4