Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS11980

Experiment: R2A with Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Chloramphenicol 0.005 mg/ml
2,969,190	+				-0.4
2,969,219	+				-2.5
2,969,219	+				+0.1
2,969,285	-				+0.2
2,969,297	+				-0.3
2,969,298	-				+0.3
2,969,316	-				-0.4
2,969,325	+				-0.2
2,969,329	-				+0.3
2,969,423	+				-0.4
2,969,423	+				+0.1
2,969,494	+				-0.2
2,969,500	-				+0.6
2,969,663	+				+0.3
2,969,663	+				-1.0
2,969,678	-				-1.0
2,969,685	-				-0.5
2,969,820	-		CA265_RS11975	0.38	+0.2
2,969,835	-		CA265_RS11975	0.46	+0.5
2,969,862	-		CA265_RS11975	0.60	+0.4
2,969,897	+		CA265_RS11975	0.78	+0.6
2,969,898	-		CA265_RS11975	0.79	-0.2
2,969,938	+				+0.6
2,969,938	+				-0.0
2,969,938	+				-0.2
2,969,940	+				+0.5
2,969,940	+				-0.2
2,969,941	-				+0.2
2,969,999	-				-1.5
2,970,015	-				+0.7
2,970,019	-				+0.3
2,970,103	+				-0.4
2,970,105	+				+0.4
2,970,269	+		CA265_RS11980	0.25	+1.1
2,970,269	+		CA265_RS11980	0.25	+1.2
2,970,269	+		CA265_RS11980	0.25	+0.9
2,970,270	-		CA265_RS11980	0.25	+0.7
2,970,270	-		CA265_RS11980	0.25	+0.0
2,970,270	-		CA265_RS11980	0.25	-0.9
2,970,270	-		CA265_RS11980	0.25	-0.2
2,970,270	-		CA265_RS11980	0.25	-0.3
2,970,455	-		CA265_RS11980	0.49	+0.7
2,970,455	-		CA265_RS11980	0.49	-0.7
2,970,455	-		CA265_RS11980	0.49	+0.4
2,970,456	+		CA265_RS11980	0.49	+0.5
2,970,527	-		CA265_RS11980	0.58	+1.1
2,970,527	-		CA265_RS11980	0.58	+0.2
2,970,527	-		CA265_RS11980	0.58	+0.4
2,970,620	+		CA265_RS11980	0.70	-0.2
2,970,621	-		CA265_RS11980	0.71	+0.7
2,970,632	+		CA265_RS11980	0.72	+3.1
2,970,633	-		CA265_RS11980	0.72	-1.5
2,970,703	+		CA265_RS11980	0.81	+0.5
2,970,703	+		CA265_RS11980	0.81	-0.1
2,970,704	-		CA265_RS11980	0.81	+0.3
2,970,765	-		CA265_RS11980	0.89	-0.1
2,970,795	+				-0.1
2,970,796	-				-0.4
2,970,796	-				+1.0
2,970,902	-		CA265_RS11985	0.13	-0.0
2,970,954	-		CA265_RS11985	0.26	-1.3
2,971,085	+		CA265_RS11985	0.60	-0.3
2,971,086	-		CA265_RS11985	0.61	+0.6
2,971,086	-		CA265_RS11985	0.61	+0.7
2,971,221	+				-0.8
2,971,226	+				-0.5
2,971,227	-				-1.6
2,971,247	-				+0.3
2,971,256	+				+0.1
2,971,257	-				-0.1
2,971,371	+				+0.5
2,971,373	+				+0.3
2,971,563	-				-0.8
2,971,569	+				-0.5
2,971,656	+				-0.9
2,971,749	+				-1.0
2,971,780	+				-0.6