Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_32 and Ac3H11_33 are separated by 27 nucleotides Ac3H11_33 and Ac3H11_34 are separated by 148 nucleotides Ac3H11_34 and Ac3H11_35 are separated by 473 nucleotides
Ac3H11_32 - Serine esterase, at 28,714 to 29,364
_32
Ac3H11_33 - Transcriptional regulator, AsnC family, at 29,392 to 29,859
_33
Ac3H11_34 - Methionine gamma-lyase (EC 4.4.1.11), at 30,008 to 31,312
_34
Ac3H11_35 - Pyruvate dehydrogenase E1 component (EC 1.2.4.1), at 31,786 to 34,515
_35
Position (kb) 30
31
32 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 29.287 kb on + strand, within Ac3H11_32 at 29.287 kb on + strand, within Ac3H11_32 at 29.287 kb on + strand, within Ac3H11_32 at 29.287 kb on + strand, within Ac3H11_32 at 29.288 kb on - strand, within Ac3H11_32 at 29.473 kb on + strand, within Ac3H11_33 at 29.473 kb on + strand, within Ac3H11_33 at 29.473 kb on + strand, within Ac3H11_33 at 29.473 kb on + strand, within Ac3H11_33 at 29.473 kb on + strand, within Ac3H11_33 at 29.473 kb on + strand, within Ac3H11_33 at 29.473 kb on + strand, within Ac3H11_33 at 29.473 kb on + strand, within Ac3H11_33 at 29.473 kb on + strand, within Ac3H11_33 at 29.473 kb on + strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.474 kb on - strand, within Ac3H11_33 at 29.489 kb on + strand, within Ac3H11_33 at 29.489 kb on + strand, within Ac3H11_33 at 29.489 kb on + strand, within Ac3H11_33 at 29.490 kb on - strand, within Ac3H11_33 at 29.490 kb on - strand, within Ac3H11_33 at 29.490 kb on - strand, within Ac3H11_33 at 29.490 kb on - strand, within Ac3H11_33 at 29.534 kb on + strand, within Ac3H11_33 at 29.534 kb on + strand, within Ac3H11_33 at 29.534 kb on + strand, within Ac3H11_33 at 29.534 kb on + strand, within Ac3H11_33 at 29.534 kb on + strand, within Ac3H11_33 at 29.534 kb on + strand, within Ac3H11_33 at 29.535 kb on - strand, within Ac3H11_33 at 29.540 kb on + strand, within Ac3H11_33 at 29.541 kb on - strand, within Ac3H11_33 at 29.859 kb on + strand at 29.859 kb on + strand at 29.859 kb on + strand at 29.859 kb on + strand at 29.859 kb on + strand at 29.859 kb on + strand at 29.859 kb on + strand at 29.859 kb on + strand at 29.859 kb on + strand at 29.859 kb on + strand at 29.860 kb on - strand at 29.860 kb on - strand at 29.860 kb on - strand at 30.071 kb on + strand at 30.072 kb on - strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.128 kb on + strand at 30.129 kb on - strand at 30.129 kb on - strand at 30.129 kb on - strand at 30.129 kb on - strand at 30.129 kb on - strand at 30.129 kb on - strand at 30.129 kb on - strand at 30.129 kb on - strand at 30.129 kb on - strand at 30.129 kb on - strand at 30.129 kb on - strand at 30.129 kb on - strand at 30.129 kb on - strand at 30.129 kb on - strand at 30.149 kb on + strand, within Ac3H11_34 at 30.150 kb on - strand, within Ac3H11_34 at 30.185 kb on + strand, within Ac3H11_34 at 30.185 kb on + strand, within Ac3H11_34 at 30.185 kb on + strand, within Ac3H11_34 at 30.185 kb on + strand, within Ac3H11_34 at 30.185 kb on + strand, within Ac3H11_34 at 30.185 kb on + strand, within Ac3H11_34 at 30.186 kb on - strand, within Ac3H11_34 at 30.186 kb on - strand, within Ac3H11_34 at 30.191 kb on + strand, within Ac3H11_34 at 30.191 kb on + strand, within Ac3H11_34 at 30.191 kb on + strand, within Ac3H11_34 at 30.191 kb on + strand, within Ac3H11_34 at 30.191 kb on + strand, within Ac3H11_34 at 30.191 kb on + strand, within Ac3H11_34 at 30.191 kb on + strand, within Ac3H11_34 at 30.191 kb on + strand, within Ac3H11_34 at 30.191 kb on + strand, within Ac3H11_34 at 30.191 kb on + strand, within Ac3H11_34 at 30.191 kb on + strand, within Ac3H11_34 at 30.191 kb on + strand, within Ac3H11_34 at 30.191 kb on + strand, within Ac3H11_34 at 30.191 kb on + strand, within Ac3H11_34 at 30.192 kb on - strand, within Ac3H11_34 at 30.192 kb on - strand, within Ac3H11_34 at 30.192 kb on - strand, within Ac3H11_34 at 30.192 kb on - strand, within Ac3H11_34 at 30.192 kb on - strand, within Ac3H11_34 at 30.192 kb on - strand, within Ac3H11_34 at 30.192 kb on - strand, within Ac3H11_34 at 30.192 kb on - strand, within Ac3H11_34 at 30.192 kb on - strand, within Ac3H11_34 at 30.192 kb on - strand, within Ac3H11_34 at 30.192 kb on - strand, within Ac3H11_34 at 30.356 kb on + strand, within Ac3H11_34 at 30.356 kb on + strand, within Ac3H11_34 at 30.356 kb on + strand, within Ac3H11_34 at 30.356 kb on + strand, within Ac3H11_34 at 30.357 kb on - strand, within Ac3H11_34 at 30.479 kb on + strand, within Ac3H11_34 at 30.480 kb on - strand, within Ac3H11_34 at 30.574 kb on + strand, within Ac3H11_34 at 30.575 kb on - strand, within Ac3H11_34 at 30.581 kb on + strand, within Ac3H11_34 at 30.581 kb on + strand, within Ac3H11_34 at 30.581 kb on + strand, within Ac3H11_34 at 30.581 kb on + strand, within Ac3H11_34 at 30.581 kb on + strand, within Ac3H11_34 at 30.581 kb on + strand, within Ac3H11_34 at 30.581 kb on + strand, within Ac3H11_34 at 30.581 kb on + strand, within Ac3H11_34 at 30.581 kb on + strand, within Ac3H11_34 at 30.582 kb on - strand, within Ac3H11_34 at 30.582 kb on - strand, within Ac3H11_34 at 30.582 kb on - strand, within Ac3H11_34 at 30.582 kb on - strand, within Ac3H11_34 at 30.582 kb on - strand, within Ac3H11_34 at 30.582 kb on - strand, within Ac3H11_34 at 30.582 kb on - strand, within Ac3H11_34 at 30.593 kb on + strand, within Ac3H11_34 at 30.594 kb on - strand, within Ac3H11_34 at 30.594 kb on - strand, within Ac3H11_34 at 30.594 kb on - strand, within Ac3H11_34 at 30.594 kb on - strand, within Ac3H11_34 at 30.594 kb on - strand, within Ac3H11_34 at 30.650 kb on + strand, within Ac3H11_34 at 30.650 kb on + strand, within Ac3H11_34 at 30.650 kb on + strand, within Ac3H11_34 at 30.650 kb on + strand, within Ac3H11_34 at 30.650 kb on + strand, within Ac3H11_34 at 30.650 kb on + strand, within Ac3H11_34 at 30.650 kb on + strand, within Ac3H11_34 at 30.650 kb on + strand, within Ac3H11_34 at 30.650 kb on + strand, within Ac3H11_34 at 30.650 kb on + strand, within Ac3H11_34 at 30.650 kb on + strand, within Ac3H11_34 at 30.651 kb on - strand, within Ac3H11_34 at 30.651 kb on - strand, within Ac3H11_34 at 30.651 kb on - strand, within Ac3H11_34 at 30.728 kb on + strand, within Ac3H11_34 at 30.728 kb on + strand, within Ac3H11_34 at 30.729 kb on - strand, within Ac3H11_34 at 31.094 kb on + strand, within Ac3H11_34 at 31.094 kb on + strand, within Ac3H11_34 at 31.094 kb on + strand, within Ac3H11_34 at 31.094 kb on + strand, within Ac3H11_34 at 31.094 kb on + strand, within Ac3H11_34 at 31.094 kb on + strand, within Ac3H11_34 at 31.094 kb on + strand, within Ac3H11_34 at 31.094 kb on + strand, within Ac3H11_34 at 31.094 kb on + strand, within Ac3H11_34 at 31.094 kb on + strand, within Ac3H11_34 at 31.095 kb on - strand, within Ac3H11_34 at 31.095 kb on - strand, within Ac3H11_34 at 31.095 kb on - strand, within Ac3H11_34 at 31.095 kb on - strand, within Ac3H11_34 at 31.095 kb on - strand, within Ac3H11_34 at 31.095 kb on - strand, within Ac3H11_34 at 31.095 kb on - strand, within Ac3H11_34 at 31.297 kb on + strand at 31.297 kb on + strand at 31.297 kb on + strand at 31.298 kb on - strand at 31.417 kb on + strand at 31.417 kb on + strand at 31.418 kb on - strand at 31.418 kb on - strand at 31.441 kb on + strand at 31.441 kb on + strand at 31.441 kb on + strand at 31.442 kb on - strand at 31.442 kb on - strand at 31.442 kb on - strand at 31.442 kb on - strand at 31.579 kb on + strand at 31.579 kb on + strand at 31.579 kb on + strand at 31.579 kb on + strand at 31.580 kb on - strand at 31.580 kb on - strand at 31.580 kb on - strand at 31.580 kb on - strand at 31.580 kb on - strand at 31.580 kb on - strand at 31.734 kb on - strand at 31.734 kb on - strand at 31.761 kb on + strand at 31.823 kb on + strand at 31.823 kb on + strand at 31.823 kb on + strand at 31.824 kb on - strand at 32.041 kb on + strand at 32.041 kb on + strand at 32.041 kb on + strand at 32.042 kb on - strand at 32.164 kb on + strand, within Ac3H11_35 at 32.164 kb on + strand, within Ac3H11_35 at 32.165 kb on - strand, within Ac3H11_35 at 32.165 kb on - strand, within Ac3H11_35 at 32.194 kb on + strand, within Ac3H11_35 at 32.194 kb on + strand, within Ac3H11_35 at 32.194 kb on + strand, within Ac3H11_35 at 32.195 kb on - strand, within Ac3H11_35 at 32.195 kb on - strand, within Ac3H11_35
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 29,287 + Ac3H11_32 0.88 -0.9 29,287 + Ac3H11_32 0.88 -0.6 29,287 + Ac3H11_32 0.88 -0.2 29,287 + Ac3H11_32 0.88 -0.6 29,288 - Ac3H11_32 0.88 -0.4 29,473 + Ac3H11_33 0.17 -0.2 29,473 + Ac3H11_33 0.17 +0.1 29,473 + Ac3H11_33 0.17 -1.0 29,473 + Ac3H11_33 0.17 +0.1 29,473 + Ac3H11_33 0.17 +0.1 29,473 + Ac3H11_33 0.17 -0.6 29,473 + Ac3H11_33 0.17 -1.1 29,473 + Ac3H11_33 0.17 -1.6 29,473 + Ac3H11_33 0.17 +0.3 29,473 + Ac3H11_33 0.17 +0.8 29,474 - Ac3H11_33 0.18 -0.0 29,474 - Ac3H11_33 0.18 -0.3 29,474 - Ac3H11_33 0.18 +0.6 29,474 - Ac3H11_33 0.18 +0.3 29,474 - Ac3H11_33 0.18 -0.9 29,474 - Ac3H11_33 0.18 +0.8 29,474 - Ac3H11_33 0.18 -0.5 29,474 - Ac3H11_33 0.18 -3.3 29,474 - Ac3H11_33 0.18 +0.1 29,474 - Ac3H11_33 0.18 -0.4 29,474 - Ac3H11_33 0.18 -0.8 29,474 - Ac3H11_33 0.18 -1.0 29,474 - Ac3H11_33 0.18 -0.4 29,474 - Ac3H11_33 0.18 -0.9 29,474 - Ac3H11_33 0.18 -0.3 29,474 - Ac3H11_33 0.18 -0.7 29,474 - Ac3H11_33 0.18 +0.6 29,474 - Ac3H11_33 0.18 +0.5 29,474 - Ac3H11_33 0.18 -0.4 29,474 - Ac3H11_33 0.18 +0.3 29,489 + Ac3H11_33 0.21 +0.4 29,489 + Ac3H11_33 0.21 -0.7 29,489 + Ac3H11_33 0.21 -1.5 29,490 - Ac3H11_33 0.21 -1.3 29,490 - Ac3H11_33 0.21 +0.7 29,490 - Ac3H11_33 0.21 +0.5 29,490 - Ac3H11_33 0.21 +1.2 29,534 + Ac3H11_33 0.30 +0.4 29,534 + Ac3H11_33 0.30 -0.2 29,534 + Ac3H11_33 0.30 -0.6 29,534 + Ac3H11_33 0.30 -0.0 29,534 + Ac3H11_33 0.30 -1.8 29,534 + Ac3H11_33 0.30 -1.2 29,535 - Ac3H11_33 0.31 -0.3 29,540 + Ac3H11_33 0.32 -0.8 29,541 - Ac3H11_33 0.32 -0.1 29,859 + -0.4 29,859 + +0.0 29,859 + -0.8 29,859 + -0.5 29,859 + -0.4 29,859 + -1.5 29,859 + -1.4 29,859 + +0.9 29,859 + +0.7 29,859 + +2.8 29,860 - -0.3 29,860 - +0.0 29,860 - +0.2 30,071 + +0.7 30,072 - -0.9 30,128 + +0.4 30,128 + -0.5 30,128 + +0.4 30,128 + -0.4 30,128 + +2.0 30,128 + -1.2 30,128 + -0.8 30,128 + +0.2 30,128 + -0.3 30,128 + +0.7 30,128 + -1.0 30,128 + -0.8 30,128 + -1.4 30,128 + -0.7 30,128 + +0.2 30,128 + -1.2 30,128 + -0.9 30,128 + -1.2 30,128 + -1.7 30,128 + -0.5 30,128 + -0.6 30,129 - -0.8 30,129 - +0.2 30,129 - -1.3 30,129 - +1.1 30,129 - -0.4 30,129 - +0.7 30,129 - +0.2 30,129 - -0.8 30,129 - -1.1 30,129 - +0.9 30,129 - -1.3 30,129 - -1.2 30,129 - +0.8 30,129 - -0.8 30,149 + Ac3H11_34 0.11 +0.7 30,150 - Ac3H11_34 0.11 +1.1 30,185 + Ac3H11_34 0.14 -2.8 30,185 + Ac3H11_34 0.14 -0.2 30,185 + Ac3H11_34 0.14 +0.4 30,185 + Ac3H11_34 0.14 -1.8 30,185 + Ac3H11_34 0.14 +2.1 30,185 + Ac3H11_34 0.14 +0.2 30,186 - Ac3H11_34 0.14 -1.2 30,186 - Ac3H11_34 0.14 -0.1 30,191 + Ac3H11_34 0.14 +0.2 30,191 + Ac3H11_34 0.14 +0.2 30,191 + Ac3H11_34 0.14 -0.2 30,191 + Ac3H11_34 0.14 -0.9 30,191 + Ac3H11_34 0.14 -0.4 30,191 + Ac3H11_34 0.14 -0.1 30,191 + Ac3H11_34 0.14 -0.4 30,191 + Ac3H11_34 0.14 -0.6 30,191 + Ac3H11_34 0.14 +0.1 30,191 + Ac3H11_34 0.14 -2.4 30,191 + Ac3H11_34 0.14 +0.1 30,191 + Ac3H11_34 0.14 +1.6 30,191 + Ac3H11_34 0.14 +0.5 30,191 + Ac3H11_34 0.14 +0.6 30,192 - Ac3H11_34 0.14 -2.4 30,192 - Ac3H11_34 0.14 +1.6 30,192 - Ac3H11_34 0.14 -0.5 30,192 - Ac3H11_34 0.14 -0.2 30,192 - Ac3H11_34 0.14 +1.1 30,192 - Ac3H11_34 0.14 -0.0 30,192 - Ac3H11_34 0.14 +1.0 30,192 - Ac3H11_34 0.14 -1.4 30,192 - Ac3H11_34 0.14 -0.9 30,192 - Ac3H11_34 0.14 -0.7 30,192 - Ac3H11_34 0.14 +0.4 30,356 + Ac3H11_34 0.27 -0.5 30,356 + Ac3H11_34 0.27 -0.2 30,356 + Ac3H11_34 0.27 +0.3 30,356 + Ac3H11_34 0.27 -1.2 30,357 - Ac3H11_34 0.27 -0.5 30,479 + Ac3H11_34 0.36 +0.7 30,480 - Ac3H11_34 0.36 +0.2 30,574 + Ac3H11_34 0.43 +0.5 30,575 - Ac3H11_34 0.43 +0.5 30,581 + Ac3H11_34 0.44 +0.7 30,581 + Ac3H11_34 0.44 -0.5 30,581 + Ac3H11_34 0.44 +0.5 30,581 + Ac3H11_34 0.44 +1.1 30,581 + Ac3H11_34 0.44 +0.4 30,581 + Ac3H11_34 0.44 -0.9 30,581 + Ac3H11_34 0.44 +1.1 30,581 + Ac3H11_34 0.44 +0.1 30,581 + Ac3H11_34 0.44 +0.2 30,582 - Ac3H11_34 0.44 -1.8 30,582 - Ac3H11_34 0.44 +0.1 30,582 - Ac3H11_34 0.44 -1.2 30,582 - Ac3H11_34 0.44 +0.3 30,582 - Ac3H11_34 0.44 -0.2 30,582 - Ac3H11_34 0.44 -0.1 30,582 - Ac3H11_34 0.44 +0.4 30,593 + Ac3H11_34 0.45 -0.3 30,594 - Ac3H11_34 0.45 -0.1 30,594 - Ac3H11_34 0.45 +1.0 30,594 - Ac3H11_34 0.45 -0.8 30,594 - Ac3H11_34 0.45 +0.6 30,594 - Ac3H11_34 0.45 -1.1 30,650 + Ac3H11_34 0.49 +0.6 30,650 + Ac3H11_34 0.49 -1.3 30,650 + Ac3H11_34 0.49 +2.7 30,650 + Ac3H11_34 0.49 +0.5 30,650 + Ac3H11_34 0.49 +1.4 30,650 + Ac3H11_34 0.49 -0.3 30,650 + Ac3H11_34 0.49 -2.6 30,650 + Ac3H11_34 0.49 +0.6 30,650 + Ac3H11_34 0.49 +0.1 30,650 + Ac3H11_34 0.49 -1.2 30,650 + Ac3H11_34 0.49 +0.6 30,651 - Ac3H11_34 0.49 +1.1 30,651 - Ac3H11_34 0.49 -0.1 30,651 - Ac3H11_34 0.49 +0.4 30,728 + Ac3H11_34 0.55 -1.4 30,728 + Ac3H11_34 0.55 +0.3 30,729 - Ac3H11_34 0.55 +0.4 31,094 + Ac3H11_34 0.83 +2.0 31,094 + Ac3H11_34 0.83 -0.7 31,094 + Ac3H11_34 0.83 +0.0 31,094 + Ac3H11_34 0.83 -0.2 31,094 + Ac3H11_34 0.83 -0.1 31,094 + Ac3H11_34 0.83 -0.7 31,094 + Ac3H11_34 0.83 -0.2 31,094 + Ac3H11_34 0.83 -0.3 31,094 + Ac3H11_34 0.83 +1.2 31,094 + Ac3H11_34 0.83 -0.5 31,095 - Ac3H11_34 0.83 +0.5 31,095 - Ac3H11_34 0.83 +0.9 31,095 - Ac3H11_34 0.83 -0.2 31,095 - Ac3H11_34 0.83 -0.6 31,095 - Ac3H11_34 0.83 +1.0 31,095 - Ac3H11_34 0.83 -0.7 31,095 - Ac3H11_34 0.83 +1.1 31,297 + +0.2 31,297 + +2.3 31,297 + +1.0 31,298 - +0.8 31,417 + +0.5 31,417 + -0.5 31,418 - +1.1 31,418 - +0.6 31,441 + -1.2 31,441 + -1.0 31,441 + -0.0 31,442 - +0.4 31,442 - +0.1 31,442 - -0.7 31,442 - -0.1 31,579 + +0.1 31,579 + +1.0 31,579 + -0.1 31,579 + +0.3 31,580 - -2.5 31,580 - -0.4 31,580 - +0.1 31,580 - +0.9 31,580 - -0.7 31,580 - +0.1 31,734 - -0.5 31,734 - -0.6 31,761 + -0.5 31,823 + -0.5 31,823 + +0.1 31,823 + -1.3 31,824 - +0.1 32,041 + +0.5 32,041 + +0.3 32,041 + -1.1 32,042 - -0.9 32,164 + Ac3H11_35 0.14 -0.8 32,164 + Ac3H11_35 0.14 -0.2 32,165 - Ac3H11_35 0.14 -0.9 32,165 - Ac3H11_35 0.14 +0.2 32,194 + Ac3H11_35 0.15 -1.1 32,194 + Ac3H11_35 0.15 -1.4 32,194 + Ac3H11_35 0.15 -0.9 32,195 - Ac3H11_35 0.15 -1.7 32,195 - Ac3H11_35 0.15 +0.3
Or see this region's nucleotide sequence