Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS09790 and AZOBR_RS09795 are separated by 3 nucleotides AZOBR_RS09795 and AZOBR_RS09800 are separated by 268 nucleotides AZOBR_RS09800 and AZOBR_RS09805 are separated by 6 nucleotides
AZOBR_RS09790: AZOBR_RS09790 - amino acid-binding protein, at 2,053,607 to 2,054,005
_RS09790
AZOBR_RS09795: AZOBR_RS09795 - hypothetical protein, at 2,054,009 to 2,055,883
_RS09795
AZOBR_RS09800: AZOBR_RS09800 - hypothetical protein, at 2,056,152 to 2,056,484
_RS09800
AZOBR_RS09805: AZOBR_RS09805 - peptide chain release factor I, at 2,056,491 to 2,056,910
_RS09805
Position (kb)
2054
2055
2056 Strain fitness (log2 ratio)
-1
0
1 at 2053.913 kb on + strand, within AZOBR_RS09790 at 2053.913 kb on + strand, within AZOBR_RS09790 at 2053.914 kb on - strand, within AZOBR_RS09790 at 2053.914 kb on - strand, within AZOBR_RS09790 at 2053.926 kb on - strand, within AZOBR_RS09790 at 2054.253 kb on + strand, within AZOBR_RS09795 at 2054.254 kb on - strand, within AZOBR_RS09795 at 2054.254 kb on - strand, within AZOBR_RS09795 at 2054.664 kb on + strand, within AZOBR_RS09795 at 2054.866 kb on - strand, within AZOBR_RS09795 at 2054.866 kb on - strand, within AZOBR_RS09795 at 2055.099 kb on + strand, within AZOBR_RS09795 at 2055.099 kb on + strand, within AZOBR_RS09795 at 2055.099 kb on + strand, within AZOBR_RS09795 at 2055.100 kb on - strand, within AZOBR_RS09795 at 2055.100 kb on - strand, within AZOBR_RS09795 at 2055.133 kb on - strand, within AZOBR_RS09795 at 2055.558 kb on + strand, within AZOBR_RS09795 at 2055.558 kb on + strand, within AZOBR_RS09795 at 2055.559 kb on - strand, within AZOBR_RS09795 at 2055.765 kb on + strand at 2055.766 kb on - strand at 2056.018 kb on + strand at 2056.019 kb on - strand at 2056.040 kb on + strand at 2056.046 kb on + strand at 2056.047 kb on - strand at 2056.047 kb on - strand at 2056.225 kb on - strand, within AZOBR_RS09800 at 2056.363 kb on - strand, within AZOBR_RS09800 at 2056.363 kb on - strand, within AZOBR_RS09800 at 2056.482 kb on + strand at 2056.483 kb on - strand at 2056.679 kb on - strand, within AZOBR_RS09805
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 2,053,913 + AZOBR_RS09790 0.77 -0.3 2,053,913 + AZOBR_RS09790 0.77 +0.7 2,053,914 - AZOBR_RS09790 0.77 +0.3 2,053,914 - AZOBR_RS09790 0.77 -0.3 2,053,926 - AZOBR_RS09790 0.80 -0.3 2,054,253 + AZOBR_RS09795 0.13 -0.0 2,054,254 - AZOBR_RS09795 0.13 +0.1 2,054,254 - AZOBR_RS09795 0.13 -0.2 2,054,664 + AZOBR_RS09795 0.35 +0.3 2,054,866 - AZOBR_RS09795 0.46 -0.0 2,054,866 - AZOBR_RS09795 0.46 +0.1 2,055,099 + AZOBR_RS09795 0.58 -0.7 2,055,099 + AZOBR_RS09795 0.58 +0.1 2,055,099 + AZOBR_RS09795 0.58 -0.4 2,055,100 - AZOBR_RS09795 0.58 -0.2 2,055,100 - AZOBR_RS09795 0.58 +0.0 2,055,133 - AZOBR_RS09795 0.60 +0.7 2,055,558 + AZOBR_RS09795 0.83 -0.7 2,055,558 + AZOBR_RS09795 0.83 -1.0 2,055,559 - AZOBR_RS09795 0.83 -0.6 2,055,765 + -0.0 2,055,766 - +0.2 2,056,018 + +0.7 2,056,019 - +0.5 2,056,040 + +0.2 2,056,046 + -0.5 2,056,047 - -0.4 2,056,047 - -0.7 2,056,225 - AZOBR_RS09800 0.22 -0.8 2,056,363 - AZOBR_RS09800 0.63 +0.1 2,056,363 - AZOBR_RS09800 0.63 -0.7 2,056,482 + +0.2 2,056,483 - +0.2 2,056,679 - AZOBR_RS09805 0.45 -0.4
Or see this region's nucleotide sequence