Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_25425 and AO353_25430 overlap by 1 nucleotides AO353_25430 and AO353_25435 are separated by 27 nucleotides AO353_25435 and AO353_25440 are separated by 61 nucleotides
AO353_25425: AO353_25425 - ABC transporter permease, at 5,605,815 to 5,606,735
_25425
AO353_25430: AO353_25430 - ABC transporter permease, at 5,606,735 to 5,607,541
_25430
AO353_25435: AO353_25435 - spermidine/putrescine ABC transporter substrate-binding protein, at 5,607,569 to 5,608,615
_25435
AO353_25440: AO353_25440 - amidase, at 5,608,677 to 5,610,128
_25440
Position (kb) 5607
5608
5609 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5606.688 kb on + strand at 5606.689 kb on - strand at 5606.689 kb on - strand at 5606.689 kb on - strand at 5606.689 kb on - strand at 5606.733 kb on + strand at 5606.733 kb on + strand at 5606.734 kb on - strand at 5606.734 kb on - strand at 5606.734 kb on - strand at 5606.745 kb on + strand at 5606.746 kb on - strand at 5606.746 kb on - strand at 5606.810 kb on + strand at 5606.811 kb on - strand at 5606.811 kb on - strand at 5606.816 kb on + strand, within AO353_25430 at 5606.816 kb on + strand, within AO353_25430 at 5606.817 kb on - strand, within AO353_25430 at 5606.817 kb on - strand at 5606.822 kb on + strand, within AO353_25430 at 5606.822 kb on + strand, within AO353_25430 at 5606.822 kb on + strand, within AO353_25430 at 5606.823 kb on - strand, within AO353_25430 at 5606.823 kb on - strand, within AO353_25430 at 5607.084 kb on + strand, within AO353_25430 at 5607.175 kb on + strand, within AO353_25430 at 5607.176 kb on - strand, within AO353_25430 at 5607.176 kb on - strand, within AO353_25430 at 5607.176 kb on - strand, within AO353_25430 at 5607.176 kb on - strand, within AO353_25430 at 5607.176 kb on - strand, within AO353_25430 at 5607.176 kb on - strand, within AO353_25430 at 5607.337 kb on - strand, within AO353_25430 at 5607.515 kb on + strand at 5607.515 kb on + strand at 5607.516 kb on - strand at 5607.516 kb on - strand at 5607.516 kb on - strand at 5607.564 kb on + strand at 5607.565 kb on - strand at 5607.565 kb on - strand at 5607.565 kb on - strand at 5607.565 kb on - strand at 5607.565 kb on - strand at 5607.568 kb on + strand at 5607.568 kb on + strand at 5607.568 kb on + strand at 5607.568 kb on + strand at 5607.569 kb on - strand at 5607.569 kb on - strand at 5607.569 kb on - strand at 5607.569 kb on - strand at 5607.569 kb on - strand at 5607.569 kb on - strand at 5607.569 kb on - strand at 5607.569 kb on - strand at 5607.680 kb on + strand, within AO353_25435 at 5607.680 kb on + strand, within AO353_25435 at 5607.681 kb on - strand, within AO353_25435 at 5607.746 kb on + strand, within AO353_25435 at 5607.746 kb on + strand, within AO353_25435 at 5607.747 kb on - strand, within AO353_25435 at 5607.885 kb on - strand, within AO353_25435 at 5607.887 kb on + strand, within AO353_25435 at 5607.888 kb on - strand, within AO353_25435 at 5607.920 kb on - strand, within AO353_25435 at 5607.920 kb on - strand, within AO353_25435 at 5607.995 kb on + strand, within AO353_25435 at 5607.996 kb on - strand, within AO353_25435 at 5607.997 kb on + strand, within AO353_25435 at 5607.997 kb on + strand, within AO353_25435 at 5607.997 kb on + strand, within AO353_25435 at 5607.997 kb on + strand, within AO353_25435 at 5607.997 kb on + strand, within AO353_25435 at 5607.997 kb on + strand, within AO353_25435 at 5607.998 kb on - strand, within AO353_25435 at 5607.998 kb on - strand, within AO353_25435 at 5608.016 kb on + strand, within AO353_25435 at 5608.016 kb on + strand, within AO353_25435 at 5608.016 kb on + strand, within AO353_25435 at 5608.016 kb on + strand, within AO353_25435 at 5608.016 kb on + strand, within AO353_25435 at 5608.016 kb on + strand, within AO353_25435 at 5608.016 kb on + strand, within AO353_25435 at 5608.016 kb on + strand, within AO353_25435 at 5608.016 kb on + strand, within AO353_25435 at 5608.016 kb on + strand, within AO353_25435 at 5608.017 kb on - strand, within AO353_25435 at 5608.017 kb on - strand, within AO353_25435 at 5608.017 kb on - strand, within AO353_25435 at 5608.017 kb on - strand, within AO353_25435 at 5608.028 kb on + strand, within AO353_25435 at 5608.028 kb on + strand, within AO353_25435 at 5608.063 kb on + strand, within AO353_25435 at 5608.063 kb on + strand, within AO353_25435 at 5608.063 kb on + strand, within AO353_25435 at 5608.063 kb on + strand, within AO353_25435 at 5608.064 kb on - strand, within AO353_25435 at 5608.064 kb on - strand, within AO353_25435 at 5608.064 kb on - strand, within AO353_25435 at 5608.064 kb on - strand, within AO353_25435 at 5608.064 kb on - strand, within AO353_25435 at 5608.064 kb on - strand, within AO353_25435 at 5608.064 kb on - strand, within AO353_25435 at 5608.106 kb on + strand, within AO353_25435 at 5608.106 kb on + strand, within AO353_25435 at 5608.106 kb on + strand, within AO353_25435 at 5608.160 kb on - strand, within AO353_25435 at 5608.197 kb on - strand, within AO353_25435 at 5608.310 kb on + strand, within AO353_25435 at 5608.310 kb on + strand at 5608.310 kb on + strand, within AO353_25435 at 5608.310 kb on + strand, within AO353_25435 at 5608.310 kb on + strand, within AO353_25435 at 5608.311 kb on - strand, within AO353_25435 at 5608.311 kb on - strand, within AO353_25435 at 5608.311 kb on - strand, within AO353_25435 at 5608.311 kb on - strand, within AO353_25435 at 5608.311 kb on - strand, within AO353_25435 at 5608.311 kb on - strand, within AO353_25435 at 5608.311 kb on - strand, within AO353_25435 at 5608.660 kb on + strand at 5608.661 kb on - strand at 5608.661 kb on - strand at 5608.661 kb on - strand at 5608.685 kb on + strand at 5608.685 kb on + strand at 5608.685 kb on + strand at 5608.685 kb on + strand at 5608.685 kb on + strand at 5608.685 kb on + strand at 5608.686 kb on - strand at 5608.686 kb on - strand at 5608.686 kb on - strand at 5608.686 kb on - strand at 5608.691 kb on + strand at 5608.691 kb on + strand at 5608.692 kb on - strand at 5608.692 kb on - strand at 5608.779 kb on + strand at 5609.097 kb on + strand, within AO353_25440 at 5609.097 kb on + strand, within AO353_25440 at 5609.097 kb on + strand, within AO353_25440 at 5609.097 kb on + strand, within AO353_25440 at 5609.097 kb on + strand, within AO353_25440 at 5609.097 kb on + strand, within AO353_25440 at 5609.523 kb on - strand, within AO353_25440
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 5,606,688 + +2.0 5,606,689 - +1.8 5,606,689 - +3.6 5,606,689 - -2.7 5,606,689 - -2.7 5,606,733 + -2.7 5,606,733 + +1.2 5,606,734 - -2.0 5,606,734 - +1.6 5,606,734 - +2.3 5,606,745 + -2.7 5,606,746 - +0.6 5,606,746 - -1.7 5,606,810 + +1.9 5,606,811 - +1.6 5,606,811 - +1.4 5,606,816 + AO353_25430 0.10 +0.6 5,606,816 + AO353_25430 0.10 +1.2 5,606,817 - AO353_25430 0.10 -1.4 5,606,817 - -0.4 5,606,822 + AO353_25430 0.11 +3.2 5,606,822 + AO353_25430 0.11 +0.1 5,606,822 + AO353_25430 0.11 -1.4 5,606,823 - AO353_25430 0.11 -0.4 5,606,823 - AO353_25430 0.11 -1.0 5,607,084 + AO353_25430 0.43 -0.4 5,607,175 + AO353_25430 0.55 +3.1 5,607,176 - AO353_25430 0.55 -2.4 5,607,176 - AO353_25430 0.55 -1.4 5,607,176 - AO353_25430 0.55 -1.7 5,607,176 - AO353_25430 0.55 -3.0 5,607,176 - AO353_25430 0.55 +1.5 5,607,176 - AO353_25430 0.55 +2.6 5,607,337 - AO353_25430 0.75 -2.7 5,607,515 + +0.3 5,607,515 + -0.4 5,607,516 - +1.4 5,607,516 - -1.7 5,607,516 - -1.1 5,607,564 + -2.4 5,607,565 - -1.0 5,607,565 - -0.4 5,607,565 - +0.9 5,607,565 - +1.2 5,607,565 - -1.4 5,607,568 + +1.3 5,607,568 + -2.0 5,607,568 + -0.4 5,607,568 + -0.4 5,607,569 - -1.4 5,607,569 - -2.7 5,607,569 - -0.4 5,607,569 - -0.4 5,607,569 - +0.9 5,607,569 - +1.3 5,607,569 - +2.4 5,607,569 - +1.2 5,607,680 + AO353_25435 0.11 -0.4 5,607,680 + AO353_25435 0.11 -1.4 5,607,681 - AO353_25435 0.11 -1.4 5,607,746 + AO353_25435 0.17 -1.4 5,607,746 + AO353_25435 0.17 -0.7 5,607,747 - AO353_25435 0.17 -1.1 5,607,885 - AO353_25435 0.30 +3.7 5,607,887 + AO353_25435 0.30 +0.0 5,607,888 - AO353_25435 0.30 +1.6 5,607,920 - AO353_25435 0.34 +0.4 5,607,920 - AO353_25435 0.34 +1.2 5,607,995 + AO353_25435 0.41 +1.2 5,607,996 - AO353_25435 0.41 -2.0 5,607,997 + AO353_25435 0.41 +0.2 5,607,997 + AO353_25435 0.41 +0.9 5,607,997 + AO353_25435 0.41 +3.7 5,607,997 + AO353_25435 0.41 +1.6 5,607,997 + AO353_25435 0.41 -1.4 5,607,997 + AO353_25435 0.41 -0.7 5,607,998 - AO353_25435 0.41 +0.5 5,607,998 - AO353_25435 0.41 +3.3 5,608,016 + AO353_25435 0.43 -0.4 5,608,016 + AO353_25435 0.43 +1.3 5,608,016 + AO353_25435 0.43 +0.9 5,608,016 + AO353_25435 0.43 -2.1 5,608,016 + AO353_25435 0.43 +1.3 5,608,016 + AO353_25435 0.43 +0.9 5,608,016 + AO353_25435 0.43 +0.9 5,608,016 + AO353_25435 0.43 -0.4 5,608,016 + AO353_25435 0.43 -3.0 5,608,016 + AO353_25435 0.43 -1.4 5,608,017 - AO353_25435 0.43 -0.4 5,608,017 - AO353_25435 0.43 -1.4 5,608,017 - AO353_25435 0.43 +2.1 5,608,017 - AO353_25435 0.43 -0.4 5,608,028 + AO353_25435 0.44 -2.7 5,608,028 + AO353_25435 0.44 -3.0 5,608,063 + AO353_25435 0.47 -0.4 5,608,063 + AO353_25435 0.47 -1.4 5,608,063 + AO353_25435 0.47 +2.3 5,608,063 + AO353_25435 0.47 -0.4 5,608,064 - AO353_25435 0.47 -1.0 5,608,064 - AO353_25435 0.47 -0.2 5,608,064 - AO353_25435 0.47 +3.3 5,608,064 - AO353_25435 0.47 -0.8 5,608,064 - AO353_25435 0.47 +0.0 5,608,064 - AO353_25435 0.47 +2.9 5,608,064 - AO353_25435 0.47 +0.6 5,608,106 + AO353_25435 0.51 +1.1 5,608,106 + AO353_25435 0.51 -0.4 5,608,106 + AO353_25435 0.51 +2.1 5,608,160 - AO353_25435 0.56 +1.0 5,608,197 - AO353_25435 0.60 +1.2 5,608,310 + AO353_25435 0.71 -1.4 5,608,310 + -0.4 5,608,310 + AO353_25435 0.71 -0.4 5,608,310 + AO353_25435 0.71 +0.8 5,608,310 + AO353_25435 0.71 -2.7 5,608,311 - AO353_25435 0.71 -0.7 5,608,311 - AO353_25435 0.71 +2.6 5,608,311 - AO353_25435 0.71 -0.4 5,608,311 - AO353_25435 0.71 -1.1 5,608,311 - AO353_25435 0.71 +2.8 5,608,311 - AO353_25435 0.71 +1.8 5,608,311 - AO353_25435 0.71 +1.9 5,608,660 + +0.2 5,608,661 - -0.4 5,608,661 - -2.0 5,608,661 - +1.2 5,608,685 + +2.2 5,608,685 + -3.2 5,608,685 + -2.4 5,608,685 + +0.3 5,608,685 + +1.2 5,608,685 + +0.9 5,608,686 - +0.9 5,608,686 - -2.0 5,608,686 - -2.4 5,608,686 - -1.4 5,608,691 + -1.4 5,608,691 + +0.6 5,608,692 - -2.7 5,608,692 - +0.2 5,608,779 + -0.4 5,609,097 + AO353_25440 0.29 -1.4 5,609,097 + AO353_25440 0.29 -0.4 5,609,097 + AO353_25440 0.29 -2.7 5,609,097 + AO353_25440 0.29 +1.2 5,609,097 + AO353_25440 0.29 +0.1 5,609,097 + AO353_25440 0.29 +1.4 5,609,523 - AO353_25440 0.58 -0.1
Or see this region's nucleotide sequence