Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_24665 and AO353_24670 are separated by 252 nucleotides AO353_24670 and AO353_24675 are separated by 276 nucleotides
AO353_24665: AO353_24665 - phosphoglucomutase, at 5,429,074 to 5,430,720
_24665
AO353_24670: AO353_24670 - pirin, at 5,430,973 to 5,431,668
_24670
AO353_24675: AO353_24675 - DNA helicase UvrD, at 5,431,945 to 5,434,419
_24675
Position (kb)
5430
5431
5432 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 5430.049 kb on + strand, within AO353_24665 at 5430.049 kb on + strand, within AO353_24665 at 5430.049 kb on + strand, within AO353_24665 at 5430.049 kb on + strand, within AO353_24665 at 5430.049 kb on + strand, within AO353_24665 at 5430.050 kb on - strand, within AO353_24665 at 5430.050 kb on - strand, within AO353_24665 at 5430.050 kb on - strand, within AO353_24665 at 5430.050 kb on - strand, within AO353_24665 at 5430.050 kb on - strand, within AO353_24665 at 5430.070 kb on + strand, within AO353_24665 at 5430.071 kb on - strand, within AO353_24665 at 5430.071 kb on - strand, within AO353_24665 at 5430.277 kb on - strand, within AO353_24665 at 5430.376 kb on + strand, within AO353_24665 at 5430.622 kb on + strand at 5430.622 kb on + strand at 5430.622 kb on + strand at 5430.622 kb on + strand at 5430.622 kb on + strand at 5430.622 kb on + strand at 5430.622 kb on + strand at 5430.623 kb on - strand at 5430.623 kb on - strand at 5430.623 kb on - strand at 5430.623 kb on - strand at 5430.623 kb on - strand at 5430.623 kb on - strand at 5430.623 kb on - strand at 5430.623 kb on - strand at 5430.632 kb on - strand at 5430.632 kb on - strand at 5430.718 kb on + strand at 5430.718 kb on + strand at 5430.718 kb on + strand at 5430.718 kb on + strand at 5430.719 kb on - strand at 5430.721 kb on + strand at 5430.721 kb on + strand at 5430.721 kb on + strand at 5430.722 kb on - strand at 5430.723 kb on - strand at 5430.786 kb on + strand at 5430.819 kb on - strand at 5430.864 kb on + strand at 5430.864 kb on + strand at 5430.864 kb on + strand at 5430.864 kb on + strand at 5430.864 kb on + strand at 5430.864 kb on + strand at 5430.864 kb on + strand at 5430.864 kb on + strand at 5430.874 kb on - strand at 5430.890 kb on + strand at 5430.890 kb on + strand at 5430.890 kb on + strand at 5430.891 kb on - strand at 5430.891 kb on - strand at 5431.358 kb on + strand, within AO353_24670 at 5431.358 kb on + strand, within AO353_24670 at 5431.358 kb on + strand, within AO353_24670 at 5431.358 kb on + strand, within AO353_24670 at 5431.358 kb on + strand, within AO353_24670 at 5431.359 kb on - strand, within AO353_24670 at 5431.399 kb on + strand at 5431.399 kb on + strand, within AO353_24670 at 5431.399 kb on + strand, within AO353_24670 at 5431.399 kb on + strand, within AO353_24670 at 5431.399 kb on + strand, within AO353_24670 at 5431.399 kb on + strand, within AO353_24670 at 5431.399 kb on + strand, within AO353_24670 at 5431.399 kb on + strand, within AO353_24670 at 5431.399 kb on + strand, within AO353_24670 at 5431.400 kb on - strand, within AO353_24670 at 5431.400 kb on - strand, within AO353_24670 at 5431.400 kb on - strand, within AO353_24670 at 5431.400 kb on - strand, within AO353_24670 at 5431.400 kb on - strand, within AO353_24670 at 5431.400 kb on - strand, within AO353_24670 at 5431.469 kb on + strand, within AO353_24670 at 5431.469 kb on + strand, within AO353_24670 at 5431.469 kb on + strand, within AO353_24670 at 5431.469 kb on + strand, within AO353_24670 at 5431.469 kb on + strand, within AO353_24670 at 5431.469 kb on + strand, within AO353_24670 at 5431.470 kb on - strand, within AO353_24670 at 5431.470 kb on - strand, within AO353_24670 at 5431.470 kb on - strand, within AO353_24670 at 5431.470 kb on - strand, within AO353_24670 at 5431.470 kb on - strand, within AO353_24670 at 5431.470 kb on - strand, within AO353_24670 at 5431.583 kb on + strand, within AO353_24670 at 5431.584 kb on - strand, within AO353_24670 at 5431.752 kb on - strand at 5431.752 kb on - strand at 5431.752 kb on - strand at 5431.825 kb on - strand at 5431.826 kb on + strand at 5431.826 kb on + strand at 5431.832 kb on - strand at 5431.832 kb on - strand at 5431.913 kb on - strand at 5432.128 kb on + strand at 5432.128 kb on + strand at 5432.135 kb on - strand at 5432.159 kb on + strand at 5432.159 kb on + strand at 5432.159 kb on + strand at 5432.159 kb on + strand at 5432.160 kb on - strand at 5432.160 kb on - strand at 5432.401 kb on - strand, within AO353_24675 at 5432.429 kb on + strand, within AO353_24675 at 5432.429 kb on + strand, within AO353_24675 at 5432.430 kb on - strand, within AO353_24675 at 5432.444 kb on - strand, within AO353_24675 at 5432.659 kb on - strand, within AO353_24675 at 5432.659 kb on - strand, within AO353_24675
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 5,430,049 + AO353_24665 0.59 -0.9 5,430,049 + AO353_24665 0.59 -1.4 5,430,049 + AO353_24665 0.59 +0.6 5,430,049 + AO353_24665 0.59 +0.8 5,430,049 + AO353_24665 0.59 -0.4 5,430,050 - AO353_24665 0.59 -0.4 5,430,050 - AO353_24665 0.59 +1.4 5,430,050 - AO353_24665 0.59 -1.4 5,430,050 - AO353_24665 0.59 -0.4 5,430,050 - AO353_24665 0.59 +1.2 5,430,070 + AO353_24665 0.60 +0.2 5,430,071 - AO353_24665 0.61 +1.3 5,430,071 - AO353_24665 0.61 -2.0 5,430,277 - AO353_24665 0.73 -0.4 5,430,376 + AO353_24665 0.79 +0.6 5,430,622 + -1.4 5,430,622 + -1.4 5,430,622 + -3.2 5,430,622 + +0.6 5,430,622 + +1.6 5,430,622 + +0.5 5,430,622 + -1.7 5,430,623 - -1.4 5,430,623 - +0.3 5,430,623 - -2.0 5,430,623 - -1.7 5,430,623 - -0.4 5,430,623 - +0.6 5,430,623 - +0.8 5,430,623 - -1.4 5,430,632 - +0.6 5,430,632 - +0.6 5,430,718 + +0.8 5,430,718 + -2.4 5,430,718 + +0.6 5,430,718 + -1.2 5,430,719 - +1.9 5,430,721 + -0.4 5,430,721 + -0.4 5,430,721 + +0.9 5,430,722 - +1.7 5,430,723 - -1.4 5,430,786 + +1.2 5,430,819 - -0.4 5,430,864 + -0.4 5,430,864 + +0.1 5,430,864 + +3.5 5,430,864 + +0.6 5,430,864 + +1.1 5,430,864 + -1.4 5,430,864 + +0.6 5,430,864 + +1.6 5,430,874 - +1.5 5,430,890 + -1.4 5,430,890 + +0.6 5,430,890 + -0.4 5,430,891 - -3.0 5,430,891 - +0.2 5,431,358 + AO353_24670 0.55 -0.4 5,431,358 + AO353_24670 0.55 +3.7 5,431,358 + AO353_24670 0.55 -1.4 5,431,358 + AO353_24670 0.55 +0.3 5,431,358 + AO353_24670 0.55 -2.4 5,431,359 - AO353_24670 0.55 -0.4 5,431,399 + -1.4 5,431,399 + AO353_24670 0.61 -0.4 5,431,399 + AO353_24670 0.61 -1.4 5,431,399 + AO353_24670 0.61 -0.4 5,431,399 + AO353_24670 0.61 -0.8 5,431,399 + AO353_24670 0.61 -1.0 5,431,399 + AO353_24670 0.61 +1.0 5,431,399 + AO353_24670 0.61 -1.4 5,431,399 + AO353_24670 0.61 -0.8 5,431,400 - AO353_24670 0.61 -0.4 5,431,400 - AO353_24670 0.61 +0.9 5,431,400 - AO353_24670 0.61 +0.3 5,431,400 - AO353_24670 0.61 +0.8 5,431,400 - AO353_24670 0.61 -0.4 5,431,400 - AO353_24670 0.61 -0.1 5,431,469 + AO353_24670 0.71 +1.9 5,431,469 + AO353_24670 0.71 -2.0 5,431,469 + AO353_24670 0.71 -0.9 5,431,469 + AO353_24670 0.71 -0.4 5,431,469 + AO353_24670 0.71 -1.2 5,431,469 + AO353_24670 0.71 -0.2 5,431,470 - AO353_24670 0.71 -0.4 5,431,470 - AO353_24670 0.71 -2.0 5,431,470 - AO353_24670 0.71 +0.4 5,431,470 - AO353_24670 0.71 -0.4 5,431,470 - AO353_24670 0.71 +1.4 5,431,470 - AO353_24670 0.71 -2.0 5,431,583 + AO353_24670 0.88 -0.4 5,431,584 - AO353_24670 0.88 +1.2 5,431,752 - -0.5 5,431,752 - +0.3 5,431,752 - +0.2 5,431,825 - -2.7 5,431,826 + -1.4 5,431,826 + -1.7 5,431,832 - +1.2 5,431,832 - -2.0 5,431,913 - -3.6 5,432,128 + +0.9 5,432,128 + +1.2 5,432,135 - +0.2 5,432,159 + +0.1 5,432,159 + -2.0 5,432,159 + -1.4 5,432,159 + -0.4 5,432,160 - -0.4 5,432,160 - -1.4 5,432,401 - AO353_24675 0.18 -0.4 5,432,429 + AO353_24675 0.20 -1.1 5,432,429 + AO353_24675 0.20 -1.0 5,432,430 - AO353_24675 0.20 -0.1 5,432,444 - AO353_24675 0.20 +0.6 5,432,659 - AO353_24675 0.29 +1.4 5,432,659 - AO353_24675 0.29 +0.6
Or see this region's nucleotide sequence