Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_24635 and AO353_24640 are separated by 521 nucleotides AO353_24640 and AO353_24645 are separated by 1 nucleotides
AO353_24635: AO353_24635 - hypothetical protein, at 5,421,086 to 5,421,400
_24635
AO353_24640: AO353_24640 - hypothetical protein, at 5,421,922 to 5,422,335
_24640
AO353_24645: AO353_24645 - hypothetical protein, at 5,422,337 to 5,424,217
_24645
Position (kb) 5421
5422
5423 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 5420.974 kb on + strand at 5420.974 kb on + strand at 5420.974 kb on + strand at 5420.975 kb on - strand at 5420.975 kb on - strand at 5421.019 kb on + strand at 5421.019 kb on + strand at 5421.019 kb on + strand at 5421.019 kb on + strand at 5421.019 kb on + strand at 5421.019 kb on + strand at 5421.020 kb on - strand at 5421.020 kb on - strand at 5421.213 kb on + strand, within AO353_24635 at 5421.213 kb on + strand, within AO353_24635 at 5421.214 kb on - strand, within AO353_24635 at 5421.214 kb on - strand, within AO353_24635 at 5421.214 kb on - strand, within AO353_24635 at 5421.214 kb on - strand, within AO353_24635 at 5421.319 kb on + strand, within AO353_24635 at 5421.321 kb on + strand at 5421.321 kb on + strand, within AO353_24635 at 5421.321 kb on + strand, within AO353_24635 at 5421.321 kb on + strand, within AO353_24635 at 5421.321 kb on + strand, within AO353_24635 at 5421.321 kb on + strand, within AO353_24635 at 5421.322 kb on - strand, within AO353_24635 at 5421.322 kb on - strand, within AO353_24635 at 5421.348 kb on + strand, within AO353_24635 at 5421.348 kb on + strand, within AO353_24635 at 5421.348 kb on + strand, within AO353_24635 at 5421.349 kb on - strand, within AO353_24635 at 5421.349 kb on - strand, within AO353_24635 at 5421.411 kb on - strand at 5421.472 kb on - strand at 5421.477 kb on + strand at 5421.478 kb on - strand at 5421.478 kb on - strand at 5421.480 kb on + strand at 5421.480 kb on + strand at 5421.584 kb on + strand at 5421.584 kb on + strand at 5421.585 kb on - strand at 5421.587 kb on + strand at 5421.587 kb on + strand at 5421.587 kb on + strand at 5421.587 kb on + strand at 5421.587 kb on + strand at 5421.587 kb on + strand at 5421.588 kb on - strand at 5421.588 kb on - strand at 5421.617 kb on + strand at 5421.618 kb on - strand at 5421.678 kb on - strand at 5421.678 kb on - strand at 5421.678 kb on - strand at 5421.725 kb on + strand at 5421.726 kb on - strand at 5421.726 kb on - strand at 5421.726 kb on - strand at 5421.776 kb on + strand at 5421.776 kb on + strand at 5421.776 kb on + strand at 5421.777 kb on - strand at 5421.777 kb on - strand at 5421.799 kb on + strand at 5421.799 kb on + strand at 5421.799 kb on + strand at 5421.800 kb on - strand at 5421.828 kb on + strand at 5421.828 kb on + strand at 5421.828 kb on + strand at 5421.828 kb on + strand at 5421.828 kb on + strand at 5421.828 kb on + strand at 5421.829 kb on - strand at 5421.829 kb on - strand at 5421.829 kb on - strand at 5421.832 kb on + strand at 5421.832 kb on + strand at 5421.832 kb on + strand at 5421.833 kb on - strand at 5421.833 kb on - strand at 5421.899 kb on + strand at 5421.899 kb on + strand at 5421.982 kb on + strand, within AO353_24640 at 5421.982 kb on + strand, within AO353_24640 at 5421.982 kb on + strand, within AO353_24640 at 5421.983 kb on - strand, within AO353_24640 at 5421.983 kb on - strand, within AO353_24640 at 5421.983 kb on - strand, within AO353_24640 at 5421.983 kb on - strand, within AO353_24640 at 5421.993 kb on + strand, within AO353_24640 at 5422.163 kb on + strand, within AO353_24640 at 5422.163 kb on + strand, within AO353_24640 at 5422.163 kb on + strand, within AO353_24640 at 5422.163 kb on + strand, within AO353_24640 at 5422.163 kb on + strand, within AO353_24640 at 5422.163 kb on + strand, within AO353_24640 at 5422.163 kb on + strand, within AO353_24640 at 5422.164 kb on - strand, within AO353_24640 at 5422.164 kb on - strand, within AO353_24640 at 5422.164 kb on - strand, within AO353_24640 at 5422.164 kb on - strand, within AO353_24640 at 5422.386 kb on + strand at 5422.386 kb on + strand at 5422.386 kb on + strand at 5422.386 kb on + strand at 5422.386 kb on + strand at 5422.386 kb on + strand at 5422.387 kb on - strand at 5422.387 kb on - strand at 5422.387 kb on - strand at 5422.387 kb on - strand at 5422.387 kb on - strand at 5422.387 kb on - strand at 5422.387 kb on - strand at 5422.412 kb on + strand at 5422.412 kb on + strand at 5422.413 kb on - strand at 5422.413 kb on - strand at 5422.564 kb on + strand, within AO353_24645 at 5422.565 kb on - strand, within AO353_24645 at 5422.565 kb on - strand, within AO353_24645 at 5422.565 kb on - strand, within AO353_24645 at 5422.565 kb on - strand, within AO353_24645 at 5422.640 kb on + strand, within AO353_24645 at 5422.640 kb on + strand, within AO353_24645 at 5422.641 kb on - strand, within AO353_24645 at 5422.641 kb on - strand, within AO353_24645 at 5422.789 kb on + strand, within AO353_24645 at 5422.789 kb on + strand, within AO353_24645 at 5422.799 kb on - strand, within AO353_24645 at 5422.812 kb on + strand, within AO353_24645 at 5422.842 kb on - strand, within AO353_24645 at 5422.892 kb on - strand, within AO353_24645 at 5422.907 kb on - strand, within AO353_24645 at 5422.908 kb on + strand at 5422.909 kb on - strand, within AO353_24645 at 5422.909 kb on - strand, within AO353_24645 at 5422.909 kb on - strand, within AO353_24645 at 5422.952 kb on - strand, within AO353_24645 at 5422.954 kb on + strand, within AO353_24645 at 5422.955 kb on - strand, within AO353_24645 at 5423.064 kb on + strand, within AO353_24645 at 5423.064 kb on + strand, within AO353_24645 at 5423.064 kb on + strand, within AO353_24645 at 5423.064 kb on + strand, within AO353_24645 at 5423.064 kb on + strand, within AO353_24645 at 5423.065 kb on - strand, within AO353_24645 at 5423.065 kb on - strand, within AO353_24645 at 5423.065 kb on - strand, within AO353_24645 at 5423.065 kb on - strand, within AO353_24645 at 5423.278 kb on + strand, within AO353_24645 at 5423.278 kb on + strand, within AO353_24645 at 5423.279 kb on - strand, within AO353_24645 at 5423.279 kb on - strand, within AO353_24645 at 5423.281 kb on - strand, within AO353_24645 at 5423.306 kb on - strand, within AO353_24645 at 5423.308 kb on + strand, within AO353_24645 at 5423.309 kb on - strand, within AO353_24645 at 5423.309 kb on - strand, within AO353_24645
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 5,420,974 + -2.0 5,420,974 + -2.0 5,420,974 + -1.4 5,420,975 - +2.4 5,420,975 - +1.9 5,421,019 + +1.5 5,421,019 + -0.4 5,421,019 + +1.6 5,421,019 + -1.4 5,421,019 + +0.1 5,421,019 + +0.0 5,421,020 - +0.4 5,421,020 - -2.2 5,421,213 + AO353_24635 0.40 +0.2 5,421,213 + AO353_24635 0.40 -2.4 5,421,214 - AO353_24635 0.41 -0.4 5,421,214 - AO353_24635 0.41 -2.4 5,421,214 - AO353_24635 0.41 +0.5 5,421,214 - AO353_24635 0.41 -0.7 5,421,319 + AO353_24635 0.74 -0.4 5,421,321 + -1.4 5,421,321 + AO353_24635 0.75 -1.4 5,421,321 + AO353_24635 0.75 -0.4 5,421,321 + AO353_24635 0.75 -2.4 5,421,321 + AO353_24635 0.75 -2.0 5,421,321 + AO353_24635 0.75 -2.0 5,421,322 - AO353_24635 0.75 +3.5 5,421,322 - AO353_24635 0.75 -2.0 5,421,348 + AO353_24635 0.83 -2.7 5,421,348 + AO353_24635 0.83 -2.0 5,421,348 + AO353_24635 0.83 -0.4 5,421,349 - AO353_24635 0.83 -2.0 5,421,349 - AO353_24635 0.83 +0.6 5,421,411 - -0.8 5,421,472 - -3.0 5,421,477 + -0.4 5,421,478 - +0.8 5,421,478 - -0.4 5,421,480 + -1.7 5,421,480 + -2.0 5,421,584 + -3.0 5,421,584 + +0.6 5,421,585 - -1.8 5,421,587 + -1.4 5,421,587 + -1.4 5,421,587 + -1.4 5,421,587 + -2.0 5,421,587 + +0.1 5,421,587 + -1.4 5,421,588 - -3.6 5,421,588 - +0.8 5,421,617 + +0.6 5,421,618 - +0.9 5,421,678 - +1.7 5,421,678 - -0.7 5,421,678 - +1.5 5,421,725 + -1.4 5,421,726 - +0.4 5,421,726 - -1.0 5,421,726 - +0.2 5,421,776 + -1.4 5,421,776 + -3.0 5,421,776 + -2.6 5,421,777 - +2.3 5,421,777 - -0.1 5,421,799 + -2.0 5,421,799 + -0.4 5,421,799 + +1.9 5,421,800 - +2.0 5,421,828 + +2.3 5,421,828 + -0.4 5,421,828 + +1.4 5,421,828 + -0.4 5,421,828 + -1.4 5,421,828 + -2.0 5,421,829 - -2.0 5,421,829 - +0.6 5,421,829 - +2.0 5,421,832 + -2.4 5,421,832 + -0.4 5,421,832 + -0.4 5,421,833 - -2.4 5,421,833 - +1.9 5,421,899 + -1.4 5,421,899 + +1.3 5,421,982 + AO353_24640 0.14 +2.8 5,421,982 + AO353_24640 0.14 -0.4 5,421,982 + AO353_24640 0.14 +0.2 5,421,983 - AO353_24640 0.15 +0.6 5,421,983 - AO353_24640 0.15 +1.4 5,421,983 - AO353_24640 0.15 +0.8 5,421,983 - AO353_24640 0.15 -0.4 5,421,993 + AO353_24640 0.17 -1.4 5,422,163 + AO353_24640 0.58 -3.4 5,422,163 + AO353_24640 0.58 +3.3 5,422,163 + AO353_24640 0.58 +1.3 5,422,163 + AO353_24640 0.58 +0.4 5,422,163 + AO353_24640 0.58 +0.0 5,422,163 + AO353_24640 0.58 -1.4 5,422,163 + AO353_24640 0.58 -1.4 5,422,164 - AO353_24640 0.58 -0.4 5,422,164 - AO353_24640 0.58 -0.1 5,422,164 - AO353_24640 0.58 -1.4 5,422,164 - AO353_24640 0.58 +1.0 5,422,386 + -2.9 5,422,386 + -2.7 5,422,386 + -1.4 5,422,386 + +3.3 5,422,386 + +2.5 5,422,386 + -2.4 5,422,387 - +1.1 5,422,387 - -2.0 5,422,387 - -0.4 5,422,387 - +0.6 5,422,387 - -2.4 5,422,387 - +2.6 5,422,387 - +1.3 5,422,412 + -2.0 5,422,412 + -3.0 5,422,413 - +0.6 5,422,413 - -2.0 5,422,564 + AO353_24645 0.12 -0.4 5,422,565 - AO353_24645 0.12 +0.2 5,422,565 - AO353_24645 0.12 -0.9 5,422,565 - AO353_24645 0.12 -0.4 5,422,565 - AO353_24645 0.12 +0.2 5,422,640 + AO353_24645 0.16 -1.4 5,422,640 + AO353_24645 0.16 -2.7 5,422,641 - AO353_24645 0.16 -0.9 5,422,641 - AO353_24645 0.16 -1.6 5,422,789 + AO353_24645 0.24 -0.2 5,422,789 + AO353_24645 0.24 -2.0 5,422,799 - AO353_24645 0.25 +3.6 5,422,812 + AO353_24645 0.25 +1.3 5,422,842 - AO353_24645 0.27 -0.8 5,422,892 - AO353_24645 0.30 -0.4 5,422,907 - AO353_24645 0.30 -3.2 5,422,908 + +1.8 5,422,909 - AO353_24645 0.30 -0.4 5,422,909 - AO353_24645 0.30 +1.8 5,422,909 - AO353_24645 0.30 -1.0 5,422,952 - AO353_24645 0.33 +1.3 5,422,954 + AO353_24645 0.33 +2.2 5,422,955 - AO353_24645 0.33 -0.8 5,423,064 + AO353_24645 0.39 -0.4 5,423,064 + AO353_24645 0.39 +2.6 5,423,064 + AO353_24645 0.39 +0.9 5,423,064 + AO353_24645 0.39 -0.4 5,423,064 + AO353_24645 0.39 -2.7 5,423,065 - AO353_24645 0.39 -0.4 5,423,065 - AO353_24645 0.39 -1.6 5,423,065 - AO353_24645 0.39 +1.6 5,423,065 - AO353_24645 0.39 +2.1 5,423,278 + AO353_24645 0.50 -2.7 5,423,278 + AO353_24645 0.50 +0.9 5,423,279 - AO353_24645 0.50 +4.1 5,423,279 - AO353_24645 0.50 -0.4 5,423,281 - AO353_24645 0.50 +1.6 5,423,306 - AO353_24645 0.52 -2.7 5,423,308 + AO353_24645 0.52 +1.9 5,423,309 - AO353_24645 0.52 -2.4 5,423,309 - AO353_24645 0.52 +1.2
Or see this region's nucleotide sequence