Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_24015 and AO353_24020 are separated by 228 nucleotides AO353_24020 and AO353_24025 are separated by 160 nucleotides
AO353_24015: AO353_24015 - non ribosomal peptide synthetase BasB, at 5,280,196 to 5,282,364
_24015
AO353_24020: AO353_24020 - RNA polymerase subunit sigma, at 5,282,593 to 5,283,111
_24020
AO353_24025: AO353_24025 - ABC transporter ATP-binding protein, at 5,283,272 to 5,285,062
_24025
Position (kb)
5282
5283
5284 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 5281.660 kb on + strand, within AO353_24015 at 5281.660 kb on + strand, within AO353_24015 at 5281.660 kb on + strand, within AO353_24015 at 5281.660 kb on + strand, within AO353_24015 at 5281.660 kb on + strand, within AO353_24015 at 5281.661 kb on - strand, within AO353_24015 at 5281.661 kb on - strand, within AO353_24015 at 5281.661 kb on - strand, within AO353_24015 at 5281.722 kb on + strand, within AO353_24015 at 5281.722 kb on + strand, within AO353_24015 at 5281.723 kb on - strand, within AO353_24015 at 5281.723 kb on - strand, within AO353_24015 at 5281.895 kb on + strand, within AO353_24015 at 5281.895 kb on + strand, within AO353_24015 at 5281.896 kb on - strand, within AO353_24015 at 5281.896 kb on - strand, within AO353_24015 at 5282.304 kb on + strand at 5282.304 kb on + strand at 5282.304 kb on + strand at 5282.304 kb on + strand at 5282.304 kb on + strand at 5282.305 kb on - strand at 5282.305 kb on - strand at 5282.305 kb on - strand at 5282.305 kb on - strand at 5282.305 kb on - strand at 5282.305 kb on - strand at 5282.305 kb on - strand at 5282.305 kb on - strand at 5282.305 kb on - strand at 5282.329 kb on + strand at 5282.330 kb on - strand at 5282.381 kb on - strand at 5282.396 kb on - strand at 5282.403 kb on - strand at 5282.403 kb on - strand at 5282.403 kb on - strand at 5282.403 kb on - strand at 5282.447 kb on - strand at 5282.503 kb on + strand at 5282.503 kb on + strand at 5282.503 kb on + strand at 5282.503 kb on + strand at 5282.503 kb on + strand at 5282.515 kb on - strand at 5282.515 kb on - strand at 5282.638 kb on + strand at 5282.638 kb on + strand at 5282.638 kb on + strand at 5282.638 kb on + strand at 5282.638 kb on + strand at 5282.639 kb on - strand at 5282.639 kb on - strand at 5282.639 kb on - strand at 5282.725 kb on + strand, within AO353_24020 at 5282.725 kb on + strand, within AO353_24020 at 5282.726 kb on - strand, within AO353_24020 at 5282.726 kb on - strand, within AO353_24020 at 5282.726 kb on - strand, within AO353_24020 at 5282.726 kb on - strand, within AO353_24020 at 5282.726 kb on - strand, within AO353_24020 at 5282.726 kb on - strand, within AO353_24020 at 5282.726 kb on - strand, within AO353_24020 at 5282.810 kb on + strand, within AO353_24020 at 5282.810 kb on + strand, within AO353_24020 at 5282.810 kb on + strand, within AO353_24020 at 5282.810 kb on + strand, within AO353_24020 at 5282.810 kb on + strand, within AO353_24020 at 5282.810 kb on + strand, within AO353_24020 at 5282.811 kb on - strand, within AO353_24020 at 5282.811 kb on - strand, within AO353_24020 at 5282.811 kb on - strand, within AO353_24020 at 5282.811 kb on - strand, within AO353_24020 at 5282.811 kb on - strand, within AO353_24020 at 5282.811 kb on - strand, within AO353_24020 at 5282.946 kb on + strand, within AO353_24020 at 5282.946 kb on + strand, within AO353_24020 at 5282.947 kb on - strand, within AO353_24020 at 5282.947 kb on - strand, within AO353_24020 at 5283.055 kb on + strand, within AO353_24020 at 5283.055 kb on + strand, within AO353_24020 at 5283.055 kb on + strand, within AO353_24020 at 5283.055 kb on + strand, within AO353_24020 at 5283.055 kb on + strand, within AO353_24020 at 5283.055 kb on + strand, within AO353_24020 at 5283.055 kb on + strand, within AO353_24020 at 5283.056 kb on - strand, within AO353_24020 at 5283.056 kb on - strand, within AO353_24020 at 5283.056 kb on - strand, within AO353_24020 at 5283.056 kb on - strand, within AO353_24020 at 5283.056 kb on - strand, within AO353_24020 at 5283.144 kb on - strand at 5283.144 kb on - strand at 5283.185 kb on + strand at 5283.186 kb on - strand at 5283.191 kb on + strand at 5283.192 kb on - strand at 5283.192 kb on - strand at 5283.256 kb on + strand at 5283.256 kb on + strand at 5283.257 kb on - strand at 5283.407 kb on + strand at 5283.407 kb on + strand at 5283.407 kb on + strand at 5283.407 kb on + strand at 5283.408 kb on - strand at 5283.408 kb on - strand at 5283.596 kb on - strand, within AO353_24025 at 5283.889 kb on + strand, within AO353_24025 at 5283.889 kb on + strand, within AO353_24025 at 5283.889 kb on + strand, within AO353_24025 at 5283.889 kb on + strand, within AO353_24025 at 5283.890 kb on - strand at 5283.890 kb on - strand, within AO353_24025
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 5,281,660 + AO353_24015 0.67 +1.5 5,281,660 + AO353_24015 0.67 -0.1 5,281,660 + AO353_24015 0.67 +0.2 5,281,660 + AO353_24015 0.67 -1.4 5,281,660 + AO353_24015 0.67 -0.4 5,281,661 - AO353_24015 0.68 +1.7 5,281,661 - AO353_24015 0.68 -0.4 5,281,661 - AO353_24015 0.68 +1.2 5,281,722 + AO353_24015 0.70 -0.4 5,281,722 + AO353_24015 0.70 +1.7 5,281,723 - AO353_24015 0.70 +0.2 5,281,723 - AO353_24015 0.70 +1.8 5,281,895 + AO353_24015 0.78 -0.4 5,281,895 + AO353_24015 0.78 -0.4 5,281,896 - AO353_24015 0.78 -0.4 5,281,896 - AO353_24015 0.78 -2.0 5,282,304 + -2.4 5,282,304 + +1.7 5,282,304 + -0.4 5,282,304 + -0.4 5,282,304 + +2.2 5,282,305 - +2.4 5,282,305 - +1.9 5,282,305 - +0.3 5,282,305 - +0.6 5,282,305 - -2.4 5,282,305 - -2.0 5,282,305 - -0.4 5,282,305 - -0.4 5,282,305 - +1.6 5,282,329 + -0.4 5,282,330 - +2.2 5,282,381 - +1.0 5,282,396 - +0.6 5,282,403 - -2.4 5,282,403 - +0.8 5,282,403 - +1.2 5,282,403 - +0.6 5,282,447 - +0.2 5,282,503 + -0.4 5,282,503 + +0.2 5,282,503 + -1.4 5,282,503 + -2.4 5,282,503 + -1.4 5,282,515 - -1.4 5,282,515 - -2.0 5,282,638 + +1.9 5,282,638 + -2.0 5,282,638 + -0.4 5,282,638 + -1.4 5,282,638 + +0.6 5,282,639 - -0.0 5,282,639 - +1.8 5,282,639 - -2.4 5,282,725 + AO353_24020 0.25 -2.7 5,282,725 + AO353_24020 0.25 +0.2 5,282,726 - AO353_24020 0.26 -2.4 5,282,726 - AO353_24020 0.26 -1.0 5,282,726 - AO353_24020 0.26 -1.4 5,282,726 - AO353_24020 0.26 -0.2 5,282,726 - AO353_24020 0.26 -1.4 5,282,726 - AO353_24020 0.26 -0.4 5,282,726 - AO353_24020 0.26 +1.2 5,282,810 + AO353_24020 0.42 -0.8 5,282,810 + AO353_24020 0.42 -1.4 5,282,810 + AO353_24020 0.42 -0.4 5,282,810 + AO353_24020 0.42 +0.3 5,282,810 + AO353_24020 0.42 +0.2 5,282,810 + AO353_24020 0.42 +0.7 5,282,811 - AO353_24020 0.42 +1.9 5,282,811 - AO353_24020 0.42 -1.0 5,282,811 - AO353_24020 0.42 -2.4 5,282,811 - AO353_24020 0.42 -0.4 5,282,811 - AO353_24020 0.42 -1.0 5,282,811 - AO353_24020 0.42 -2.7 5,282,946 + AO353_24020 0.68 -3.4 5,282,946 + AO353_24020 0.68 -2.0 5,282,947 - AO353_24020 0.68 -0.8 5,282,947 - AO353_24020 0.68 -0.7 5,283,055 + AO353_24020 0.89 +2.4 5,283,055 + AO353_24020 0.89 -2.0 5,283,055 + AO353_24020 0.89 -2.4 5,283,055 + AO353_24020 0.89 +0.3 5,283,055 + AO353_24020 0.89 +1.4 5,283,055 + AO353_24020 0.89 -2.0 5,283,055 + AO353_24020 0.89 -0.4 5,283,056 - AO353_24020 0.89 -2.4 5,283,056 - AO353_24020 0.89 -0.8 5,283,056 - AO353_24020 0.89 -0.2 5,283,056 - AO353_24020 0.89 +1.7 5,283,056 - AO353_24020 0.89 -1.4 5,283,144 - -1.4 5,283,144 - +2.4 5,283,185 + +1.2 5,283,186 - +0.2 5,283,191 + -3.6 5,283,192 - +0.6 5,283,192 - +0.1 5,283,256 + +4.0 5,283,256 + +1.0 5,283,257 - -1.4 5,283,407 + -2.4 5,283,407 + -2.7 5,283,407 + -0.4 5,283,407 + -3.0 5,283,408 - -0.0 5,283,408 - -1.4 5,283,596 - AO353_24025 0.18 -1.4 5,283,889 + AO353_24025 0.34 -1.4 5,283,889 + AO353_24025 0.34 -1.4 5,283,889 + AO353_24025 0.34 -0.4 5,283,889 + AO353_24025 0.34 -2.0 5,283,890 - -0.4 5,283,890 - AO353_24025 0.35 -2.7
Or see this region's nucleotide sequence