Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_23125 and AO353_23130 are separated by 16 nucleotides AO353_23130 and AO353_23135 overlap by 4 nucleotides AO353_23135 and AO353_23140 are separated by 10 nucleotides AO353_23140 and AO353_23145 are separated by 10 nucleotides
AO353_23125: AO353_23125 - hypothetical protein, at 5,075,389 to 5,075,616
_23125
AO353_23130: AO353_23130 - glyoxalase, at 5,075,633 to 5,076,598
_23130
AO353_23135: AO353_23135 - aldehyde dehydrogenase, at 5,076,595 to 5,078,091
_23135
AO353_23140: AO353_23140 - aspartate dehydrogenase, at 5,078,102 to 5,078,905
_23140
AO353_23145: AO353_23145 - hypothetical protein, at 5,078,916 to 5,080,598
_23145
Position (kb) 5076
5077
5078
5079 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 5075.597 kb on + strand at 5075.597 kb on + strand at 5075.597 kb on + strand at 5075.598 kb on - strand at 5075.634 kb on + strand at 5075.634 kb on + strand at 5075.635 kb on - strand at 5075.802 kb on + strand, within AO353_23130 at 5075.802 kb on + strand, within AO353_23130 at 5075.802 kb on + strand, within AO353_23130 at 5075.803 kb on - strand, within AO353_23130 at 5075.803 kb on - strand, within AO353_23130 at 5075.803 kb on - strand, within AO353_23130 at 5075.805 kb on + strand, within AO353_23130 at 5075.806 kb on - strand, within AO353_23130 at 5075.928 kb on - strand, within AO353_23130 at 5075.928 kb on - strand, within AO353_23130 at 5076.093 kb on + strand, within AO353_23130 at 5076.094 kb on - strand, within AO353_23130 at 5076.094 kb on - strand, within AO353_23130 at 5076.168 kb on + strand, within AO353_23130 at 5076.168 kb on + strand, within AO353_23130 at 5076.169 kb on - strand, within AO353_23130 at 5076.169 kb on - strand, within AO353_23130 at 5076.348 kb on + strand, within AO353_23130 at 5076.348 kb on + strand, within AO353_23130 at 5076.349 kb on - strand, within AO353_23130 at 5076.567 kb on + strand at 5076.567 kb on + strand at 5076.567 kb on + strand at 5076.568 kb on - strand at 5076.588 kb on - strand at 5076.598 kb on + strand at 5076.598 kb on + strand at 5076.598 kb on + strand at 5076.598 kb on + strand at 5076.599 kb on - strand at 5076.604 kb on + strand at 5076.604 kb on + strand at 5076.604 kb on + strand at 5076.604 kb on + strand at 5076.657 kb on - strand at 5076.677 kb on + strand at 5076.677 kb on + strand at 5076.677 kb on + strand at 5076.677 kb on + strand at 5076.677 kb on + strand at 5076.678 kb on - strand at 5076.678 kb on - strand at 5076.678 kb on - strand at 5076.678 kb on - strand at 5076.678 kb on - strand at 5076.678 kb on - strand at 5076.678 kb on - strand at 5076.678 kb on - strand at 5076.678 kb on - strand at 5076.764 kb on + strand, within AO353_23135 at 5076.764 kb on + strand, within AO353_23135 at 5076.764 kb on + strand, within AO353_23135 at 5076.765 kb on - strand, within AO353_23135 at 5076.857 kb on + strand, within AO353_23135 at 5076.857 kb on + strand, within AO353_23135 at 5076.857 kb on + strand, within AO353_23135 at 5076.857 kb on + strand, within AO353_23135 at 5076.858 kb on - strand, within AO353_23135 at 5076.858 kb on - strand, within AO353_23135 at 5076.858 kb on - strand, within AO353_23135 at 5076.883 kb on + strand, within AO353_23135 at 5076.883 kb on + strand, within AO353_23135 at 5076.884 kb on - strand, within AO353_23135 at 5076.992 kb on + strand, within AO353_23135 at 5076.992 kb on + strand, within AO353_23135 at 5076.992 kb on + strand, within AO353_23135 at 5076.992 kb on + strand, within AO353_23135 at 5076.992 kb on + strand, within AO353_23135 at 5076.992 kb on + strand, within AO353_23135 at 5076.992 kb on + strand, within AO353_23135 at 5076.993 kb on - strand, within AO353_23135 at 5076.993 kb on - strand, within AO353_23135 at 5076.993 kb on - strand, within AO353_23135 at 5076.995 kb on + strand, within AO353_23135 at 5076.995 kb on + strand, within AO353_23135 at 5076.996 kb on - strand, within AO353_23135 at 5076.996 kb on - strand, within AO353_23135 at 5077.007 kb on + strand, within AO353_23135 at 5077.076 kb on + strand, within AO353_23135 at 5077.199 kb on + strand, within AO353_23135 at 5077.200 kb on - strand, within AO353_23135 at 5077.237 kb on - strand, within AO353_23135 at 5077.237 kb on - strand, within AO353_23135 at 5077.268 kb on + strand, within AO353_23135 at 5077.330 kb on - strand, within AO353_23135 at 5077.381 kb on + strand, within AO353_23135 at 5077.381 kb on + strand, within AO353_23135 at 5077.381 kb on + strand, within AO353_23135 at 5077.382 kb on - strand, within AO353_23135 at 5077.382 kb on - strand, within AO353_23135 at 5077.382 kb on - strand, within AO353_23135 at 5077.399 kb on - strand, within AO353_23135 at 5077.399 kb on - strand, within AO353_23135 at 5077.674 kb on - strand, within AO353_23135 at 5077.674 kb on - strand, within AO353_23135 at 5077.871 kb on + strand, within AO353_23135 at 5078.024 kb on + strand at 5078.072 kb on - strand at 5078.103 kb on + strand at 5078.152 kb on - strand at 5078.152 kb on - strand at 5078.152 kb on - strand at 5078.152 kb on - strand at 5078.476 kb on - strand, within AO353_23140 at 5078.476 kb on - strand, within AO353_23140 at 5078.817 kb on + strand, within AO353_23140 at 5078.818 kb on - strand, within AO353_23140 at 5078.818 kb on - strand, within AO353_23140 at 5078.818 kb on - strand, within AO353_23140 at 5078.818 kb on - strand, within AO353_23140 at 5078.818 kb on - strand, within AO353_23140 at 5078.896 kb on + strand at 5078.896 kb on + strand at 5078.897 kb on - strand at 5078.897 kb on - strand at 5078.897 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 5,075,597 + -1.0 5,075,597 + -1.4 5,075,597 + -1.4 5,075,598 - +0.1 5,075,634 + -1.4 5,075,634 + +0.4 5,075,635 - +0.2 5,075,802 + AO353_23130 0.17 +2.9 5,075,802 + AO353_23130 0.17 -1.4 5,075,802 + AO353_23130 0.17 -0.4 5,075,803 - AO353_23130 0.18 +1.2 5,075,803 - AO353_23130 0.18 -0.1 5,075,803 - AO353_23130 0.18 +2.4 5,075,805 + AO353_23130 0.18 -0.4 5,075,806 - AO353_23130 0.18 -1.4 5,075,928 - AO353_23130 0.31 +0.6 5,075,928 - AO353_23130 0.31 -2.0 5,076,093 + AO353_23130 0.48 -3.2 5,076,094 - AO353_23130 0.48 +1.9 5,076,094 - AO353_23130 0.48 -0.4 5,076,168 + AO353_23130 0.55 -0.4 5,076,168 + AO353_23130 0.55 +3.1 5,076,169 - AO353_23130 0.55 +1.2 5,076,169 - AO353_23130 0.55 -3.6 5,076,348 + AO353_23130 0.74 -0.5 5,076,348 + AO353_23130 0.74 +0.2 5,076,349 - AO353_23130 0.74 -0.4 5,076,567 + -2.0 5,076,567 + -1.4 5,076,567 + -0.1 5,076,568 - -1.4 5,076,588 - +1.8 5,076,598 + -2.7 5,076,598 + -1.0 5,076,598 + +0.0 5,076,598 + -0.6 5,076,599 - -2.7 5,076,604 + -0.4 5,076,604 + -0.4 5,076,604 + -2.6 5,076,604 + +4.2 5,076,657 - +0.8 5,076,677 + -0.4 5,076,677 + +0.0 5,076,677 + +0.0 5,076,677 + -2.7 5,076,677 + -2.4 5,076,678 - +1.9 5,076,678 - -1.4 5,076,678 - -2.0 5,076,678 - +1.4 5,076,678 - -2.7 5,076,678 - +1.0 5,076,678 - -0.1 5,076,678 - -2.0 5,076,678 - +1.2 5,076,764 + AO353_23135 0.11 +1.6 5,076,764 + AO353_23135 0.11 -2.0 5,076,764 + AO353_23135 0.11 -0.4 5,076,765 - AO353_23135 0.11 -1.4 5,076,857 + AO353_23135 0.18 +2.5 5,076,857 + AO353_23135 0.18 -2.7 5,076,857 + AO353_23135 0.18 -1.4 5,076,857 + AO353_23135 0.18 -1.4 5,076,858 - AO353_23135 0.18 -0.4 5,076,858 - AO353_23135 0.18 -2.0 5,076,858 - AO353_23135 0.18 +1.7 5,076,883 + AO353_23135 0.19 -2.7 5,076,883 + AO353_23135 0.19 +1.0 5,076,884 - AO353_23135 0.19 +1.5 5,076,992 + AO353_23135 0.27 +0.3 5,076,992 + AO353_23135 0.27 -0.4 5,076,992 + AO353_23135 0.27 -0.4 5,076,992 + AO353_23135 0.27 -1.8 5,076,992 + AO353_23135 0.27 -0.4 5,076,992 + AO353_23135 0.27 -1.4 5,076,992 + AO353_23135 0.27 +1.7 5,076,993 - AO353_23135 0.27 -1.4 5,076,993 - AO353_23135 0.27 +1.2 5,076,993 - AO353_23135 0.27 -2.4 5,076,995 + AO353_23135 0.27 +0.8 5,076,995 + AO353_23135 0.27 -3.0 5,076,996 - AO353_23135 0.27 +0.6 5,076,996 - AO353_23135 0.27 -0.4 5,077,007 + AO353_23135 0.28 -1.1 5,077,076 + AO353_23135 0.32 -1.4 5,077,199 + AO353_23135 0.40 +1.2 5,077,200 - AO353_23135 0.40 +2.2 5,077,237 - AO353_23135 0.43 -2.0 5,077,237 - AO353_23135 0.43 +0.4 5,077,268 + AO353_23135 0.45 +1.0 5,077,330 - AO353_23135 0.49 +3.9 5,077,381 + AO353_23135 0.53 -0.6 5,077,381 + AO353_23135 0.53 -2.0 5,077,381 + AO353_23135 0.53 -0.4 5,077,382 - AO353_23135 0.53 +0.4 5,077,382 - AO353_23135 0.53 +0.2 5,077,382 - AO353_23135 0.53 -0.1 5,077,399 - AO353_23135 0.54 -1.4 5,077,399 - AO353_23135 0.54 -2.3 5,077,674 - AO353_23135 0.72 -2.0 5,077,674 - AO353_23135 0.72 -0.4 5,077,871 + AO353_23135 0.85 -1.4 5,078,024 + +1.6 5,078,072 - -2.4 5,078,103 + -1.4 5,078,152 - -0.4 5,078,152 - -2.0 5,078,152 - -0.7 5,078,152 - +2.5 5,078,476 - AO353_23140 0.47 -2.4 5,078,476 - AO353_23140 0.47 -1.4 5,078,817 + AO353_23140 0.89 -2.0 5,078,818 - AO353_23140 0.89 -2.4 5,078,818 - AO353_23140 0.89 -3.4 5,078,818 - AO353_23140 0.89 +1.5 5,078,818 - AO353_23140 0.89 +1.6 5,078,818 - AO353_23140 0.89 +1.2 5,078,896 + -0.4 5,078,896 + +2.2 5,078,897 - +1.4 5,078,897 - +1.9 5,078,897 - -0.4
Or see this region's nucleotide sequence