Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22755

Experiment: Cisplatin 0.006 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_22750 and AO353_22755 are separated by 822 nucleotidesAO353_22755 and AO353_22765 are separated by 413 nucleotidesAO353_22765 and AO353_22770 are separated by 263 nucleotides AO353_22750: AO353_22750 - glucosidase, at 4,981,131 to 4,983,755 _22750 AO353_22755: AO353_22755 - hypothetical protein, at 4,984,578 to 4,985,552 _22755 AO353_22765: AO353_22765 - addiction module antitoxin, at 4,985,966 to 4,986,256 _22765 AO353_22770: AO353_22770 - amidohydrolase, at 4,986,520 to 4,988,478 _22770 Position (kb) 4984 4985 4986Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 4983.664 kb on + strandat 4983.664 kb on + strandat 4983.664 kb on + strandat 4983.665 kb on - strandat 4983.665 kb on - strandat 4983.665 kb on - strandat 4983.665 kb on - strandat 4983.675 kb on + strandat 4983.675 kb on + strandat 4983.675 kb on + strandat 4983.753 kb on + strandat 4983.753 kb on + strandat 4983.754 kb on - strandat 4983.791 kb on + strandat 4983.877 kb on + strandat 4983.877 kb on + strandat 4983.877 kb on + strandat 4983.878 kb on - strandat 4983.878 kb on - strandat 4983.956 kb on + strandat 4983.956 kb on + strandat 4983.956 kb on + strandat 4983.957 kb on - strandat 4984.009 kb on + strandat 4984.270 kb on + strandat 4984.270 kb on + strandat 4984.301 kb on + strandat 4984.301 kb on + strandat 4984.301 kb on + strandat 4984.301 kb on + strandat 4984.301 kb on + strandat 4984.301 kb on + strandat 4984.301 kb on + strandat 4984.305 kb on + strandat 4984.305 kb on + strandat 4984.305 kb on + strandat 4984.305 kb on + strandat 4984.305 kb on + strandat 4984.305 kb on + strandat 4984.305 kb on + strandat 4984.387 kb on + strandat 4984.427 kb on + strandat 4984.427 kb on + strandat 4984.427 kb on + strandat 4984.443 kb on - strandat 4984.443 kb on - strandat 4984.443 kb on - strandat 4984.482 kb on - strandat 4984.482 kb on - strandat 4984.482 kb on - strandat 4984.485 kb on + strandat 4984.485 kb on + strandat 4984.485 kb on + strandat 4984.485 kb on + strandat 4984.485 kb on + strandat 4984.485 kb on + strandat 4984.485 kb on + strandat 4984.485 kb on + strandat 4984.485 kb on + strandat 4984.485 kb on + strandat 4984.485 kb on + strandat 4984.485 kb on + strandat 4984.485 kb on + strandat 4984.485 kb on + strandat 4984.485 kb on + strandat 4984.485 kb on + strandat 4984.485 kb on + strandat 4984.485 kb on + strandat 4984.485 kb on + strandat 4984.485 kb on + strandat 4984.485 kb on + strandat 4984.485 kb on + strandat 4984.485 kb on + strandat 4984.485 kb on + strandat 4984.485 kb on + strandat 4984.485 kb on + strandat 4984.485 kb on + strandat 4984.486 kb on - strandat 4984.486 kb on - strandat 4984.486 kb on - strandat 4984.486 kb on - strandat 4984.486 kb on - strandat 4984.486 kb on - strandat 4984.486 kb on - strandat 4984.486 kb on - strandat 4984.486 kb on - strandat 4984.486 kb on - strandat 4984.486 kb on - strandat 4984.486 kb on - strandat 4984.486 kb on - strandat 4984.486 kb on - strandat 4984.486 kb on - strandat 4984.486 kb on - strandat 4984.486 kb on - strandat 4984.486 kb on - strandat 4984.486 kb on - strandat 4984.489 kb on + strandat 4984.489 kb on + strandat 4984.489 kb on + strandat 4984.489 kb on + strandat 4984.489 kb on + strandat 4984.516 kb on + strandat 4984.516 kb on + strandat 4984.516 kb on + strandat 4984.517 kb on - strandat 4984.517 kb on - strandat 4984.517 kb on - strandat 4984.561 kb on - strandat 4984.596 kb on + strandat 4984.596 kb on + strandat 4984.596 kb on + strandat 4984.597 kb on - strandat 4984.597 kb on - strandat 4984.602 kb on + strandat 4984.602 kb on + strandat 4984.603 kb on - strandat 4984.603 kb on - strandat 4984.603 kb on - strandat 4984.603 kb on - strandat 4984.603 kb on - strandat 4984.603 kb on - strandat 4984.603 kb on - strandat 4984.603 kb on - strandat 4984.751 kb on + strand, within AO353_22755at 4984.764 kb on + strand, within AO353_22755at 4984.764 kb on + strand, within AO353_22755at 4984.765 kb on - strand, within AO353_22755at 4984.765 kb on - strand, within AO353_22755at 4984.773 kb on + strand, within AO353_22755at 4984.773 kb on + strand, within AO353_22755at 4984.773 kb on + strandat 4984.773 kb on + strand, within AO353_22755at 4984.773 kb on + strand, within AO353_22755at 4984.774 kb on - strand, within AO353_22755at 4984.774 kb on - strand, within AO353_22755at 4984.785 kb on + strand, within AO353_22755at 4984.785 kb on + strand, within AO353_22755at 4984.785 kb on + strand, within AO353_22755at 4984.785 kb on + strand, within AO353_22755at 4984.785 kb on + strand, within AO353_22755at 4984.786 kb on - strand, within AO353_22755at 4984.786 kb on - strand, within AO353_22755at 4984.786 kb on - strand, within AO353_22755at 4984.786 kb on - strand, within AO353_22755at 4984.854 kb on + strand, within AO353_22755at 4984.854 kb on + strand, within AO353_22755at 4984.854 kb on + strand, within AO353_22755at 4984.855 kb on - strand, within AO353_22755at 4984.855 kb on - strand, within AO353_22755at 4984.923 kb on + strand, within AO353_22755at 4984.923 kb on + strand, within AO353_22755at 4984.924 kb on - strand, within AO353_22755at 4984.924 kb on - strand, within AO353_22755at 4984.924 kb on - strand, within AO353_22755at 4985.205 kb on + strand, within AO353_22755at 4985.205 kb on + strand, within AO353_22755at 4985.206 kb on - strand, within AO353_22755at 4985.206 kb on - strand, within AO353_22755at 4985.206 kb on - strand, within AO353_22755at 4985.303 kb on + strand, within AO353_22755at 4985.303 kb on + strand, within AO353_22755at 4985.303 kb on + strand, within AO353_22755at 4985.304 kb on - strand, within AO353_22755at 4985.304 kb on - strand, within AO353_22755at 4985.379 kb on + strand, within AO353_22755at 4985.380 kb on - strand, within AO353_22755at 4985.388 kb on + strand, within AO353_22755at 4985.388 kb on + strand, within AO353_22755at 4985.388 kb on + strand, within AO353_22755at 4985.388 kb on + strand, within AO353_22755at 4985.388 kb on + strand, within AO353_22755at 4985.389 kb on - strand, within AO353_22755at 4985.389 kb on - strand, within AO353_22755at 4985.389 kb on - strand, within AO353_22755at 4985.389 kb on - strand, within AO353_22755at 4985.389 kb on - strand, within AO353_22755at 4985.390 kb on + strand, within AO353_22755at 4985.413 kb on + strand, within AO353_22755at 4985.413 kb on + strand, within AO353_22755at 4985.413 kb on + strand, within AO353_22755at 4985.413 kb on + strand, within AO353_22755at 4985.413 kb on + strand, within AO353_22755at 4985.413 kb on + strand, within AO353_22755at 4985.413 kb on + strand, within AO353_22755at 4985.413 kb on + strand, within AO353_22755at 4985.413 kb on + strand, within AO353_22755at 4985.414 kb on - strand, within AO353_22755at 4985.414 kb on - strand, within AO353_22755at 4985.414 kb on - strand, within AO353_22755at 4985.476 kb on + strandat 4985.477 kb on - strandat 4985.477 kb on - strandat 4985.477 kb on - strandat 4985.477 kb on - strandat 4985.487 kb on - strandat 4985.526 kb on + strandat 4985.526 kb on + strandat 4985.527 kb on - strandat 4985.675 kb on + strandat 4985.676 kb on - strandat 4985.676 kb on - strandat 4985.696 kb on + strandat 4985.697 kb on - strandat 4985.715 kb on + strandat 4985.715 kb on + strandat 4985.715 kb on + strandat 4985.715 kb on + strandat 4985.715 kb on + strandat 4985.715 kb on + strandat 4985.715 kb on + strandat 4985.715 kb on + strandat 4985.716 kb on - strandat 4985.716 kb on - strandat 4985.716 kb on - strandat 4985.716 kb on - strandat 4985.716 kb on - strandat 4985.716 kb on - strandat 4985.716 kb on - strandat 4985.716 kb on - strandat 4985.716 kb on - strandat 4985.728 kb on + strandat 4985.728 kb on + strandat 4985.728 kb on + strandat 4985.728 kb on + strandat 4985.728 kb on + strandat 4985.730 kb on + strandat 4985.730 kb on + strandat 4985.730 kb on + strandat 4985.730 kb on + strandat 4985.731 kb on - strandat 4985.731 kb on - strandat 4985.731 kb on - strandat 4985.731 kb on - strandat 4985.803 kb on + strandat 4985.803 kb on + strandat 4985.804 kb on - strandat 4985.804 kb on - strandat 4985.816 kb on - strandat 4985.856 kb on + strandat 4985.857 kb on - strandat 4985.961 kb on + strandat 4985.980 kb on + strandat 4985.980 kb on + strandat 4986.032 kb on + strand, within AO353_22765at 4986.032 kb on + strand, within AO353_22765at 4986.032 kb on + strand, within AO353_22765at 4986.032 kb on + strand, within AO353_22765at 4986.032 kb on + strand, within AO353_22765at 4986.033 kb on - strand, within AO353_22765at 4986.033 kb on - strand, within AO353_22765at 4986.089 kb on + strand, within AO353_22765at 4986.090 kb on - strand, within AO353_22765at 4986.090 kb on - strand, within AO353_22765at 4986.155 kb on + strand, within AO353_22765at 4986.155 kb on + strand, within AO353_22765at 4986.155 kb on + strand, within AO353_22765at 4986.155 kb on + strand, within AO353_22765at 4986.156 kb on - strand, within AO353_22765at 4986.156 kb on - strand, within AO353_22765at 4986.202 kb on + strand, within AO353_22765at 4986.502 kb on + strandat 4986.503 kb on - strandat 4986.503 kb on - strandat 4986.503 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml
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4,983,664 + +2.2
4,983,664 + +2.0
4,983,664 + -1.4
4,983,665 - +0.2
4,983,665 - -0.1
4,983,665 - +2.2
4,983,665 - -0.4
4,983,675 + +1.2
4,983,675 + +2.3
4,983,675 + +2.1
4,983,753 + +1.6
4,983,753 + -1.4
4,983,754 - -1.4
4,983,791 + +1.0
4,983,877 + +1.2
4,983,877 + +1.2
4,983,877 + +1.6
4,983,878 - +0.2
4,983,878 - +1.9
4,983,956 + +1.0
4,983,956 + +0.4
4,983,956 + +0.5
4,983,957 - -0.4
4,984,009 + -1.0
4,984,270 + -0.4
4,984,270 + +1.5
4,984,301 + -1.2
4,984,301 + +0.6
4,984,301 + -2.7
4,984,301 + -1.0
4,984,301 + +1.0
4,984,301 + -0.8
4,984,301 + +0.2
4,984,305 + -1.4
4,984,305 + +0.5
4,984,305 + +0.5
4,984,305 + +0.2
4,984,305 + -1.4
4,984,305 + -0.4
4,984,305 + -1.0
4,984,387 + -0.8
4,984,427 + +0.5
4,984,427 + +0.6
4,984,427 + +1.6
4,984,443 - -2.0
4,984,443 - +1.5
4,984,443 - +1.0
4,984,482 - +1.0
4,984,482 - +0.6
4,984,482 - -0.7
4,984,485 + -0.8
4,984,485 + -0.1
4,984,485 + -1.1
4,984,485 + -2.4
4,984,485 + +2.5
4,984,485 + -1.6
4,984,485 + +1.8
4,984,485 + -2.4
4,984,485 + -2.4
4,984,485 + -1.7
4,984,485 + -2.0
4,984,485 + -3.0
4,984,485 + -0.4
4,984,485 + +1.2
4,984,485 + -2.7
4,984,485 + -0.5
4,984,485 + +0.3
4,984,485 + -0.8
4,984,485 + -2.0
4,984,485 + -0.4
4,984,485 + -0.4
4,984,485 + +2.3
4,984,485 + -0.9
4,984,485 + -0.0
4,984,485 + -2.0
4,984,485 + -2.0
4,984,485 + -2.4
4,984,486 - -2.7
4,984,486 - -1.4
4,984,486 - +2.6
4,984,486 - -1.4
4,984,486 - -1.4
4,984,486 - -2.4
4,984,486 - -0.4
4,984,486 - -0.4
4,984,486 - +1.7
4,984,486 - +1.0
4,984,486 - +1.8
4,984,486 - -2.0
4,984,486 - -0.2
4,984,486 - -1.4
4,984,486 - -1.4
4,984,486 - -0.6
4,984,486 - -3.0
4,984,486 - +1.2
4,984,486 - -1.0
4,984,489 + -0.4
4,984,489 + -1.4
4,984,489 + +2.0
4,984,489 + -0.4
4,984,489 + -0.4
4,984,516 + +0.2
4,984,516 + +1.8
4,984,516 + +1.6
4,984,517 - -0.4
4,984,517 - -0.4
4,984,517 - -0.4
4,984,561 - +1.0
4,984,596 + -0.4
4,984,596 + -1.4
4,984,596 + -1.0
4,984,597 - -1.0
4,984,597 - -2.4
4,984,602 + -0.4
4,984,602 + -1.4
4,984,603 - -1.4
4,984,603 - -0.4
4,984,603 - -1.0
4,984,603 - -0.4
4,984,603 - +0.6
4,984,603 - -1.4
4,984,603 - -2.0
4,984,603 - +3.7
4,984,751 + AO353_22755 0.18 -2.7
4,984,764 + AO353_22755 0.19 -0.4
4,984,764 + AO353_22755 0.19 -1.0
4,984,765 - AO353_22755 0.19 -0.4
4,984,765 - AO353_22755 0.19 -1.4
4,984,773 + AO353_22755 0.20 +0.6
4,984,773 + AO353_22755 0.20 -2.0
4,984,773 + -0.4
4,984,773 + AO353_22755 0.20 -0.8
4,984,773 + AO353_22755 0.20 -1.4
4,984,774 - AO353_22755 0.20 -2.4
4,984,774 - AO353_22755 0.20 -0.0
4,984,785 + AO353_22755 0.21 +1.0
4,984,785 + AO353_22755 0.21 +1.2
4,984,785 + AO353_22755 0.21 -0.4
4,984,785 + AO353_22755 0.21 -1.2
4,984,785 + AO353_22755 0.21 +1.4
4,984,786 - AO353_22755 0.21 -0.8
4,984,786 - AO353_22755 0.21 +0.2
4,984,786 - AO353_22755 0.21 -1.4
4,984,786 - AO353_22755 0.21 -0.8
4,984,854 + AO353_22755 0.28 -2.4
4,984,854 + AO353_22755 0.28 +2.0
4,984,854 + AO353_22755 0.28 -2.4
4,984,855 - AO353_22755 0.28 -0.4
4,984,855 - AO353_22755 0.28 -2.0
4,984,923 + AO353_22755 0.35 -1.7
4,984,923 + AO353_22755 0.35 -0.8
4,984,924 - AO353_22755 0.35 -1.0
4,984,924 - AO353_22755 0.35 -0.4
4,984,924 - AO353_22755 0.35 -1.0
4,985,205 + AO353_22755 0.64 -0.4
4,985,205 + AO353_22755 0.64 +3.0
4,985,206 - AO353_22755 0.64 -0.4
4,985,206 - AO353_22755 0.64 -0.4
4,985,206 - AO353_22755 0.64 -0.5
4,985,303 + AO353_22755 0.74 -2.7
4,985,303 + AO353_22755 0.74 +2.1
4,985,303 + AO353_22755 0.74 -2.7
4,985,304 - AO353_22755 0.74 +2.0
4,985,304 - AO353_22755 0.74 -0.4
4,985,379 + AO353_22755 0.82 +2.7
4,985,380 - AO353_22755 0.82 -0.4
4,985,388 + AO353_22755 0.83 -2.7
4,985,388 + AO353_22755 0.83 -1.4
4,985,388 + AO353_22755 0.83 -2.4
4,985,388 + AO353_22755 0.83 -1.4
4,985,388 + AO353_22755 0.83 -1.4
4,985,389 - AO353_22755 0.83 -2.0
4,985,389 - AO353_22755 0.83 +0.2
4,985,389 - AO353_22755 0.83 -1.4
4,985,389 - AO353_22755 0.83 +0.1
4,985,389 - AO353_22755 0.83 -1.7
4,985,390 + AO353_22755 0.83 -2.0
4,985,413 + AO353_22755 0.86 -0.4
4,985,413 + AO353_22755 0.86 -0.4
4,985,413 + AO353_22755 0.86 -0.4
4,985,413 + AO353_22755 0.86 -0.4
4,985,413 + AO353_22755 0.86 -3.0
4,985,413 + AO353_22755 0.86 +0.1
4,985,413 + AO353_22755 0.86 +0.9
4,985,413 + AO353_22755 0.86 -3.0
4,985,413 + AO353_22755 0.86 -2.0
4,985,414 - AO353_22755 0.86 +1.8
4,985,414 - AO353_22755 0.86 +1.4
4,985,414 - AO353_22755 0.86 -2.0
4,985,476 + +0.6
4,985,477 - -0.8
4,985,477 - -1.4
4,985,477 - +1.6
4,985,477 - -0.4
4,985,487 - +2.1
4,985,526 + +1.2
4,985,526 + -1.4
4,985,527 - -1.4
4,985,675 + -2.2
4,985,676 - +1.4
4,985,676 - +2.3
4,985,696 + -1.4
4,985,697 - +0.6
4,985,715 + -3.2
4,985,715 + -1.4
4,985,715 + -1.4
4,985,715 + +0.9
4,985,715 + +2.2
4,985,715 + -0.4
4,985,715 + -3.4
4,985,715 + +1.2
4,985,716 - -0.4
4,985,716 - +1.5
4,985,716 - -0.7
4,985,716 - -1.9
4,985,716 - -2.4
4,985,716 - +1.1
4,985,716 - +2.0
4,985,716 - +1.1
4,985,716 - -1.4
4,985,728 + +0.2
4,985,728 + -0.4
4,985,728 + -0.4
4,985,728 + +2.1
4,985,728 + +0.2
4,985,730 + -2.4
4,985,730 + -1.4
4,985,730 + +0.2
4,985,730 + +1.6
4,985,731 - -0.4
4,985,731 - -1.4
4,985,731 - +2.6
4,985,731 - -0.2
4,985,803 + +2.2
4,985,803 + +0.6
4,985,804 - +1.6
4,985,804 - -1.9
4,985,816 - +0.6
4,985,856 + -1.9
4,985,857 - -1.4
4,985,961 + -1.4
4,985,980 + -1.4
4,985,980 + +1.4
4,986,032 + AO353_22765 0.23 +0.4
4,986,032 + AO353_22765 0.23 -0.4
4,986,032 + AO353_22765 0.23 -0.4
4,986,032 + AO353_22765 0.23 +0.2
4,986,032 + AO353_22765 0.23 -0.4
4,986,033 - AO353_22765 0.23 -0.4
4,986,033 - AO353_22765 0.23 -1.4
4,986,089 + AO353_22765 0.42 +0.4
4,986,090 - AO353_22765 0.43 -1.9
4,986,090 - AO353_22765 0.43 +1.2
4,986,155 + AO353_22765 0.65 -0.4
4,986,155 + AO353_22765 0.65 -0.4
4,986,155 + AO353_22765 0.65 -0.4
4,986,155 + AO353_22765 0.65 +0.1
4,986,156 - AO353_22765 0.65 -2.4
4,986,156 - AO353_22765 0.65 -0.9
4,986,202 + AO353_22765 0.81 -0.4
4,986,502 + -0.4
4,986,503 - -0.4
4,986,503 - -0.9
4,986,503 - +0.1

Or see this region's nucleotide sequence