Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_21565 and AO353_21570 are separated by 18 nucleotides AO353_21570 and AO353_21575 overlap by 4 nucleotides
AO353_21565: AO353_21565 - type VI secretion protein, at 4,719,842 to 4,721,173
_21565
AO353_21570: AO353_21570 - type VI secretion system protein ImpK, at 4,721,192 to 4,721,959
_21570
AO353_21575: AO353_21575 - type VI secretion system protein ImpL, at 4,721,956 to 4,725,774
_21575
Position (kb)
4721
4722 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4720.192 kb on - strand, within AO353_21565 at 4720.192 kb on - strand, within AO353_21565 at 4720.192 kb on - strand, within AO353_21565 at 4720.194 kb on + strand, within AO353_21565 at 4720.195 kb on - strand, within AO353_21565 at 4720.273 kb on + strand, within AO353_21565 at 4720.374 kb on + strand, within AO353_21565 at 4720.385 kb on + strand at 4720.385 kb on + strand, within AO353_21565 at 4720.386 kb on - strand, within AO353_21565 at 4720.622 kb on + strand, within AO353_21565 at 4720.622 kb on + strand, within AO353_21565 at 4720.622 kb on + strand, within AO353_21565 at 4720.622 kb on + strand, within AO353_21565 at 4720.622 kb on + strand, within AO353_21565 at 4720.622 kb on + strand, within AO353_21565 at 4720.622 kb on + strand, within AO353_21565 at 4720.622 kb on + strand, within AO353_21565 at 4720.622 kb on + strand, within AO353_21565 at 4720.622 kb on + strand, within AO353_21565 at 4720.622 kb on + strand, within AO353_21565 at 4720.623 kb on - strand, within AO353_21565 at 4720.623 kb on - strand, within AO353_21565 at 4720.623 kb on - strand, within AO353_21565 at 4720.623 kb on - strand, within AO353_21565 at 4720.623 kb on - strand, within AO353_21565 at 4720.623 kb on - strand, within AO353_21565 at 4720.623 kb on - strand, within AO353_21565 at 4720.623 kb on - strand, within AO353_21565 at 4720.623 kb on - strand, within AO353_21565 at 4720.725 kb on - strand, within AO353_21565 at 4720.734 kb on + strand, within AO353_21565 at 4720.735 kb on - strand, within AO353_21565 at 4721.015 kb on + strand, within AO353_21565 at 4721.015 kb on + strand, within AO353_21565 at 4721.033 kb on - strand, within AO353_21565 at 4721.432 kb on + strand, within AO353_21570 at 4721.432 kb on + strand, within AO353_21570 at 4721.433 kb on - strand, within AO353_21570 at 4721.433 kb on - strand, within AO353_21570 at 4721.511 kb on + strand, within AO353_21570 at 4721.525 kb on + strand, within AO353_21570 at 4721.525 kb on + strand, within AO353_21570 at 4721.525 kb on + strand at 4721.525 kb on + strand, within AO353_21570 at 4721.526 kb on - strand, within AO353_21570 at 4721.526 kb on - strand, within AO353_21570 at 4721.526 kb on - strand, within AO353_21570 at 4721.526 kb on - strand, within AO353_21570 at 4721.618 kb on + strand, within AO353_21570 at 4721.618 kb on + strand, within AO353_21570 at 4721.618 kb on + strand, within AO353_21570 at 4721.618 kb on + strand, within AO353_21570 at 4721.634 kb on + strand, within AO353_21570 at 4722.070 kb on + strand at 4722.459 kb on - strand, within AO353_21575 at 4722.487 kb on + strand, within AO353_21575 at 4722.487 kb on + strand, within AO353_21575 at 4722.487 kb on + strand, within AO353_21575 at 4722.488 kb on - strand, within AO353_21575 at 4722.488 kb on - strand, within AO353_21575 at 4722.488 kb on - strand, within AO353_21575 at 4722.488 kb on - strand, within AO353_21575 at 4722.488 kb on - strand, within AO353_21575 at 4722.589 kb on + strand, within AO353_21575 at 4722.589 kb on + strand, within AO353_21575 at 4722.589 kb on + strand, within AO353_21575 at 4722.590 kb on - strand, within AO353_21575 at 4722.590 kb on - strand, within AO353_21575 at 4722.821 kb on - strand, within AO353_21575 at 4722.821 kb on - strand, within AO353_21575 at 4722.821 kb on - strand, within AO353_21575 at 4722.821 kb on - strand, within AO353_21575 at 4722.821 kb on - strand at 4722.849 kb on + strand, within AO353_21575 at 4722.872 kb on - strand, within AO353_21575
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 4,720,192 - AO353_21565 0.26 +3.6 4,720,192 - AO353_21565 0.26 -0.3 4,720,192 - AO353_21565 0.26 -0.3 4,720,194 + AO353_21565 0.26 +0.3 4,720,195 - AO353_21565 0.27 +1.9 4,720,273 + AO353_21565 0.32 -1.3 4,720,374 + AO353_21565 0.40 +3.6 4,720,385 + -1.3 4,720,385 + AO353_21565 0.41 +0.0 4,720,386 - AO353_21565 0.41 +1.7 4,720,622 + AO353_21565 0.59 -0.3 4,720,622 + AO353_21565 0.59 -0.7 4,720,622 + AO353_21565 0.59 -3.1 4,720,622 + AO353_21565 0.59 +1.8 4,720,622 + AO353_21565 0.59 -2.3 4,720,622 + AO353_21565 0.59 +0.1 4,720,622 + AO353_21565 0.59 -1.0 4,720,622 + AO353_21565 0.59 +1.0 4,720,622 + AO353_21565 0.59 +1.3 4,720,622 + AO353_21565 0.59 +1.7 4,720,622 + AO353_21565 0.59 -1.3 4,720,623 - AO353_21565 0.59 -0.3 4,720,623 - AO353_21565 0.59 +1.7 4,720,623 - AO353_21565 0.59 -0.3 4,720,623 - AO353_21565 0.59 -1.3 4,720,623 - AO353_21565 0.59 +0.2 4,720,623 - AO353_21565 0.59 -2.3 4,720,623 - AO353_21565 0.59 +2.0 4,720,623 - AO353_21565 0.59 +0.7 4,720,623 - AO353_21565 0.59 +1.8 4,720,725 - AO353_21565 0.66 +0.7 4,720,734 + AO353_21565 0.67 -2.6 4,720,735 - AO353_21565 0.67 +1.4 4,721,015 + AO353_21565 0.88 -1.3 4,721,015 + AO353_21565 0.88 +0.6 4,721,033 - AO353_21565 0.89 -0.5 4,721,432 + AO353_21570 0.31 -1.9 4,721,432 + AO353_21570 0.31 +0.7 4,721,433 - AO353_21570 0.31 +2.1 4,721,433 - AO353_21570 0.31 +2.3 4,721,511 + AO353_21570 0.42 -2.3 4,721,525 + AO353_21570 0.43 -2.3 4,721,525 + AO353_21570 0.43 -1.3 4,721,525 + -0.3 4,721,525 + AO353_21570 0.43 -2.9 4,721,526 - AO353_21570 0.43 -1.6 4,721,526 - AO353_21570 0.43 +1.4 4,721,526 - AO353_21570 0.43 +1.3 4,721,526 - AO353_21570 0.43 +1.1 4,721,618 + AO353_21570 0.55 -2.3 4,721,618 + AO353_21570 0.55 +0.7 4,721,618 + AO353_21570 0.55 -0.8 4,721,618 + AO353_21570 0.55 -1.9 4,721,634 + AO353_21570 0.58 -0.3 4,722,070 + -2.3 4,722,459 - AO353_21575 0.13 -1.9 4,722,487 + AO353_21575 0.14 -1.9 4,722,487 + AO353_21575 0.14 -2.3 4,722,487 + AO353_21575 0.14 +1.6 4,722,488 - AO353_21575 0.14 -2.0 4,722,488 - AO353_21575 0.14 -1.3 4,722,488 - AO353_21575 0.14 -2.3 4,722,488 - AO353_21575 0.14 -0.6 4,722,488 - AO353_21575 0.14 -0.8 4,722,589 + AO353_21575 0.17 -2.3 4,722,589 + AO353_21575 0.17 -1.9 4,722,589 + AO353_21575 0.17 -0.1 4,722,590 - AO353_21575 0.17 -1.3 4,722,590 - AO353_21575 0.17 -2.6 4,722,821 - AO353_21575 0.23 -1.3 4,722,821 - AO353_21575 0.23 -2.3 4,722,821 - AO353_21575 0.23 +0.5 4,722,821 - AO353_21575 0.23 -0.9 4,722,821 - -1.3 4,722,849 + AO353_21575 0.23 -1.9 4,722,872 - AO353_21575 0.24 -2.1
Or see this region's nucleotide sequence