Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_21395 and AO353_21400 are separated by 325 nucleotides AO353_21400 and AO353_21405 are separated by 214 nucleotides AO353_21405 and AO353_21410 are separated by 135 nucleotides AO353_21410 and AO353_21415 are separated by 42 nucleotides AO353_21415 and AO353_21420 are separated by 159 nucleotides
AO353_21395: AO353_21395 - porin, at 4,684,995 to 4,686,344
_21395
AO353_21400: AO353_21400 - conjugal transfer protein TraR, at 4,686,670 to 4,687,074
_21400
AO353_21405: AO353_21405 - chemotaxis protein, at 4,687,289 to 4,688,899
_21405
AO353_21410: AO353_21410 - hypothetical protein, at 4,689,035 to 4,689,238
_21410
AO353_21415: AO353_21415 - hypothetical protein, at 4,689,281 to 4,689,511
_21415
AO353_21420: AO353_21420 - hypothetical protein, at 4,689,671 to 4,689,862
_21420
Position (kb)
4687
4688
4689 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 4686.289 kb on + strand at 4686.289 kb on + strand at 4686.289 kb on + strand at 4686.290 kb on - strand at 4686.290 kb on - strand at 4686.290 kb on - strand at 4686.290 kb on - strand at 4686.290 kb on - strand at 4686.322 kb on + strand at 4686.342 kb on + strand at 4686.342 kb on + strand at 4686.343 kb on - strand at 4686.343 kb on - strand at 4686.343 kb on - strand at 4686.365 kb on + strand at 4686.365 kb on + strand at 4686.365 kb on + strand at 4686.366 kb on - strand at 4686.404 kb on + strand at 4686.404 kb on + strand at 4686.404 kb on + strand at 4686.404 kb on + strand at 4686.404 kb on + strand at 4686.404 kb on + strand at 4686.404 kb on + strand at 4686.404 kb on + strand at 4686.404 kb on + strand at 4686.404 kb on + strand at 4686.404 kb on + strand at 4686.404 kb on + strand at 4686.404 kb on + strand at 4686.404 kb on + strand at 4686.404 kb on + strand at 4686.405 kb on - strand at 4686.405 kb on - strand at 4686.405 kb on - strand at 4686.405 kb on - strand at 4686.405 kb on - strand at 4686.405 kb on - strand at 4686.405 kb on - strand at 4686.405 kb on - strand at 4686.405 kb on - strand at 4686.405 kb on - strand at 4686.405 kb on - strand at 4686.405 kb on - strand at 4686.406 kb on + strand at 4686.406 kb on + strand at 4686.406 kb on + strand at 4686.406 kb on + strand at 4686.407 kb on - strand at 4686.407 kb on - strand at 4686.407 kb on - strand at 4686.407 kb on - strand at 4686.408 kb on + strand at 4686.408 kb on + strand at 4686.408 kb on + strand at 4686.408 kb on + strand at 4686.408 kb on + strand at 4686.408 kb on + strand at 4686.408 kb on + strand at 4686.409 kb on - strand at 4686.409 kb on - strand at 4686.409 kb on - strand at 4686.409 kb on - strand at 4686.409 kb on - strand at 4686.409 kb on - strand at 4686.434 kb on + strand at 4686.434 kb on + strand at 4686.436 kb on + strand at 4686.436 kb on + strand at 4686.437 kb on - strand at 4686.437 kb on - strand at 4686.471 kb on + strand at 4686.471 kb on + strand at 4686.472 kb on - strand at 4686.472 kb on - strand at 4686.481 kb on + strand at 4686.482 kb on - strand at 4686.482 kb on - strand at 4686.482 kb on - strand at 4686.540 kb on + strand at 4686.540 kb on + strand at 4686.557 kb on + strand at 4686.558 kb on - strand at 4686.558 kb on - strand at 4686.587 kb on + strand at 4686.587 kb on + strand at 4686.587 kb on + strand at 4686.588 kb on - strand at 4686.588 kb on - strand at 4686.588 kb on - strand at 4686.709 kb on + strand at 4686.709 kb on + strand at 4686.710 kb on - strand at 4686.710 kb on - strand at 4686.710 kb on - strand at 4686.931 kb on - strand, within AO353_21400 at 4687.015 kb on + strand, within AO353_21400 at 4687.015 kb on + strand, within AO353_21400 at 4687.015 kb on + strand, within AO353_21400 at 4687.015 kb on + strand, within AO353_21400 at 4687.016 kb on - strand, within AO353_21400 at 4687.016 kb on - strand, within AO353_21400 at 4687.171 kb on + strand at 4687.172 kb on - strand at 4687.185 kb on + strand at 4687.221 kb on + strand at 4687.221 kb on + strand at 4687.222 kb on - strand at 4687.225 kb on + strand at 4687.225 kb on + strand at 4687.237 kb on - strand at 4687.237 kb on - strand at 4687.264 kb on + strand at 4687.264 kb on + strand at 4687.264 kb on + strand at 4687.265 kb on - strand at 4687.433 kb on + strand at 4687.434 kb on - strand at 4687.434 kb on - strand at 4687.462 kb on + strand, within AO353_21405 at 4687.462 kb on + strand, within AO353_21405 at 4687.463 kb on - strand, within AO353_21405 at 4687.556 kb on + strand, within AO353_21405 at 4687.914 kb on + strand, within AO353_21405 at 4687.914 kb on + strand, within AO353_21405 at 4687.915 kb on - strand, within AO353_21405 at 4687.915 kb on - strand, within AO353_21405 at 4688.219 kb on - strand, within AO353_21405 at 4688.384 kb on + strand, within AO353_21405 at 4688.385 kb on - strand, within AO353_21405 at 4688.385 kb on - strand, within AO353_21405 at 4688.399 kb on + strand, within AO353_21405 at 4688.399 kb on + strand, within AO353_21405 at 4688.399 kb on + strand, within AO353_21405 at 4688.399 kb on + strand, within AO353_21405 at 4688.400 kb on - strand, within AO353_21405 at 4688.400 kb on - strand, within AO353_21405 at 4688.400 kb on - strand, within AO353_21405 at 4688.498 kb on + strand, within AO353_21405 at 4688.498 kb on + strand, within AO353_21405 at 4688.498 kb on + strand, within AO353_21405 at 4688.498 kb on + strand, within AO353_21405 at 4688.498 kb on + strand, within AO353_21405 at 4688.498 kb on + strand, within AO353_21405 at 4688.498 kb on + strand, within AO353_21405 at 4688.499 kb on - strand, within AO353_21405 at 4688.499 kb on - strand, within AO353_21405 at 4688.499 kb on - strand, within AO353_21405 at 4688.499 kb on - strand, within AO353_21405 at 4688.499 kb on - strand, within AO353_21405 at 4688.499 kb on - strand, within AO353_21405 at 4688.642 kb on + strand, within AO353_21405 at 4688.643 kb on - strand, within AO353_21405 at 4688.643 kb on - strand, within AO353_21405 at 4688.646 kb on + strand, within AO353_21405 at 4688.646 kb on + strand, within AO353_21405 at 4688.691 kb on + strand, within AO353_21405 at 4688.691 kb on + strand, within AO353_21405 at 4688.691 kb on + strand, within AO353_21405 at 4688.691 kb on + strand, within AO353_21405 at 4688.692 kb on - strand, within AO353_21405 at 4688.692 kb on - strand, within AO353_21405 at 4688.692 kb on - strand, within AO353_21405 at 4688.692 kb on - strand, within AO353_21405 at 4688.692 kb on - strand, within AO353_21405 at 4688.692 kb on - strand, within AO353_21405 at 4688.692 kb on - strand, within AO353_21405 at 4688.696 kb on - strand, within AO353_21405 at 4688.696 kb on - strand, within AO353_21405 at 4688.775 kb on + strand at 4688.775 kb on + strand at 4688.775 kb on + strand at 4688.776 kb on - strand at 4688.776 kb on - strand at 4688.776 kb on - strand at 4688.776 kb on - strand at 4688.778 kb on + strand at 4688.778 kb on + strand at 4688.778 kb on + strand at 4688.779 kb on - strand at 4688.779 kb on - strand at 4688.779 kb on - strand at 4688.789 kb on + strand at 4688.789 kb on + strand at 4688.789 kb on + strand at 4688.789 kb on + strand at 4688.789 kb on + strand at 4688.789 kb on + strand at 4688.789 kb on + strand at 4688.789 kb on + strand at 4688.789 kb on + strand at 4688.789 kb on + strand at 4688.789 kb on + strand at 4688.789 kb on + strand at 4688.789 kb on + strand at 4688.789 kb on + strand at 4688.789 kb on + strand at 4688.789 kb on + strand at 4688.790 kb on - strand at 4688.790 kb on - strand at 4688.790 kb on - strand at 4688.790 kb on - strand at 4688.790 kb on - strand at 4688.790 kb on - strand at 4688.790 kb on - strand at 4688.790 kb on - strand at 4688.790 kb on - strand at 4688.790 kb on - strand at 4688.790 kb on - strand at 4688.790 kb on - strand at 4688.791 kb on + strand at 4688.876 kb on + strand at 4688.963 kb on - strand at 4688.986 kb on - strand at 4689.167 kb on - strand, within AO353_21410 at 4689.184 kb on + strand, within AO353_21410 at 4689.184 kb on + strand, within AO353_21410 at 4689.184 kb on + strand, within AO353_21410 at 4689.185 kb on - strand, within AO353_21410 at 4689.236 kb on + strand at 4689.236 kb on + strand at 4689.236 kb on + strand at 4689.237 kb on - strand at 4689.396 kb on + strand, within AO353_21415 at 4689.396 kb on + strand, within AO353_21415 at 4689.396 kb on + strand, within AO353_21415 at 4689.397 kb on - strand, within AO353_21415 at 4689.397 kb on - strand, within AO353_21415 at 4689.397 kb on - strand, within AO353_21415 at 4689.431 kb on + strand, within AO353_21415 at 4689.431 kb on + strand, within AO353_21415 at 4689.431 kb on + strand, within AO353_21415 at 4689.432 kb on - strand, within AO353_21415 at 4689.432 kb on - strand, within AO353_21415 at 4689.432 kb on - strand, within AO353_21415 at 4689.432 kb on - strand, within AO353_21415 at 4689.432 kb on - strand, within AO353_21415 at 4689.432 kb on - strand, within AO353_21415 at 4689.432 kb on - strand, within AO353_21415 at 4689.513 kb on + strand at 4689.514 kb on - strand at 4689.532 kb on + strand at 4689.532 kb on + strand at 4689.533 kb on - strand at 4689.533 kb on - strand at 4689.620 kb on + strand at 4689.621 kb on - strand at 4689.621 kb on - strand at 4689.621 kb on - strand at 4689.621 kb on - strand at 4689.621 kb on - strand at 4689.737 kb on + strand, within AO353_21420 at 4689.738 kb on - strand, within AO353_21420 at 4689.738 kb on - strand, within AO353_21420 at 4689.749 kb on - strand, within AO353_21420 at 4689.816 kb on + strand, within AO353_21420 at 4689.816 kb on + strand, within AO353_21420 at 4689.816 kb on + strand, within AO353_21420 at 4689.816 kb on + strand, within AO353_21420 at 4689.816 kb on + strand, within AO353_21420 at 4689.816 kb on + strand, within AO353_21420 at 4689.817 kb on - strand, within AO353_21420 at 4689.817 kb on - strand, within AO353_21420 at 4689.817 kb on - strand at 4689.817 kb on - strand, within AO353_21420 at 4689.817 kb on - strand, within AO353_21420 at 4689.817 kb on - strand, within AO353_21420 at 4689.817 kb on - strand, within AO353_21420 at 4689.817 kb on - strand, within AO353_21420 at 4689.817 kb on - strand, within AO353_21420 at 4689.817 kb on - strand, within AO353_21420 at 4689.817 kb on - strand, within AO353_21420 at 4689.817 kb on - strand at 4689.862 kb on + strand at 4689.862 kb on + strand at 4689.862 kb on + strand at 4689.862 kb on + strand at 4689.863 kb on - strand at 4689.863 kb on - strand at 4689.863 kb on - strand at 4689.877 kb on + strand at 4689.878 kb on - strand at 4689.895 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 4,686,289 + -0.7 4,686,289 + -0.3 4,686,289 + +3.4 4,686,290 - +1.3 4,686,290 - -1.8 4,686,290 - -1.3 4,686,290 - +0.3 4,686,290 - +0.3 4,686,322 + -1.3 4,686,342 + -1.8 4,686,342 + +0.2 4,686,343 - +1.7 4,686,343 - +1.3 4,686,343 - -1.3 4,686,365 + -1.8 4,686,365 + -1.8 4,686,365 + +0.5 4,686,366 - +4.1 4,686,404 + -0.6 4,686,404 + -0.3 4,686,404 + -0.3 4,686,404 + -1.3 4,686,404 + -0.8 4,686,404 + -1.3 4,686,404 + -1.6 4,686,404 + +2.4 4,686,404 + -2.3 4,686,404 + -1.7 4,686,404 + -2.3 4,686,404 + +1.1 4,686,404 + -1.3 4,686,404 + -0.3 4,686,404 + +0.7 4,686,405 - -1.3 4,686,405 - -1.8 4,686,405 - +2.7 4,686,405 - +1.1 4,686,405 - -2.3 4,686,405 - -2.6 4,686,405 - -2.3 4,686,405 - +0.7 4,686,405 - -1.8 4,686,405 - +1.6 4,686,405 - +2.4 4,686,405 - -0.3 4,686,406 + +1.7 4,686,406 + +2.3 4,686,406 + +0.5 4,686,406 + +1.7 4,686,407 - +1.1 4,686,407 - +1.6 4,686,407 - +0.0 4,686,407 - +2.3 4,686,408 + -1.8 4,686,408 + -1.3 4,686,408 + -0.3 4,686,408 + -0.3 4,686,408 + -1.3 4,686,408 + -2.3 4,686,408 + +0.5 4,686,409 - -2.8 4,686,409 - -1.8 4,686,409 - -0.3 4,686,409 - +1.3 4,686,409 - +0.4 4,686,409 - +0.6 4,686,434 + -2.8 4,686,434 + -0.3 4,686,436 + -2.3 4,686,436 + -1.3 4,686,437 - +0.7 4,686,437 - +2.3 4,686,471 + -1.3 4,686,471 + -0.3 4,686,472 - +0.0 4,686,472 - -1.6 4,686,481 + -2.3 4,686,482 - -0.7 4,686,482 - +4.1 4,686,482 - +2.1 4,686,540 + -3.1 4,686,540 + -0.6 4,686,557 + -2.3 4,686,558 - +1.0 4,686,558 - +1.2 4,686,587 + -1.8 4,686,587 + -1.8 4,686,587 + -1.3 4,686,588 - +2.0 4,686,588 - -0.3 4,686,588 - -1.8 4,686,709 + -1.3 4,686,709 + -0.3 4,686,710 - -2.3 4,686,710 - +1.7 4,686,710 - -0.3 4,686,931 - AO353_21400 0.64 +0.4 4,687,015 + AO353_21400 0.85 -1.3 4,687,015 + AO353_21400 0.85 +1.7 4,687,015 + AO353_21400 0.85 -0.3 4,687,015 + AO353_21400 0.85 +1.1 4,687,016 - AO353_21400 0.85 -0.3 4,687,016 - AO353_21400 0.85 +2.3 4,687,171 + -2.6 4,687,172 - -1.3 4,687,185 + -0.8 4,687,221 + +2.5 4,687,221 + +0.9 4,687,222 - -0.6 4,687,225 + -1.3 4,687,225 + +0.2 4,687,237 - +1.3 4,687,237 - +3.2 4,687,264 + -1.8 4,687,264 + +1.2 4,687,264 + -0.3 4,687,265 - +1.1 4,687,433 + +2.0 4,687,434 - +1.3 4,687,434 - -1.3 4,687,462 + AO353_21405 0.11 -0.5 4,687,462 + AO353_21405 0.11 +0.8 4,687,463 - AO353_21405 0.11 -1.6 4,687,556 + AO353_21405 0.17 +0.7 4,687,914 + AO353_21405 0.39 -1.8 4,687,914 + AO353_21405 0.39 +0.7 4,687,915 - AO353_21405 0.39 -0.6 4,687,915 - AO353_21405 0.39 +3.2 4,688,219 - AO353_21405 0.58 +0.6 4,688,384 + AO353_21405 0.68 +2.5 4,688,385 - AO353_21405 0.68 -2.3 4,688,385 - AO353_21405 0.68 +2.3 4,688,399 + AO353_21405 0.69 -1.3 4,688,399 + AO353_21405 0.69 -1.8 4,688,399 + AO353_21405 0.69 +4.1 4,688,399 + AO353_21405 0.69 +1.3 4,688,400 - AO353_21405 0.69 +1.7 4,688,400 - AO353_21405 0.69 -0.3 4,688,400 - AO353_21405 0.69 +0.4 4,688,498 + AO353_21405 0.75 +2.2 4,688,498 + AO353_21405 0.75 +2.6 4,688,498 + AO353_21405 0.75 -0.3 4,688,498 + AO353_21405 0.75 -1.3 4,688,498 + AO353_21405 0.75 -1.7 4,688,498 + AO353_21405 0.75 +1.3 4,688,498 + AO353_21405 0.75 +0.5 4,688,499 - AO353_21405 0.75 -1.3 4,688,499 - AO353_21405 0.75 +0.2 4,688,499 - AO353_21405 0.75 +0.3 4,688,499 - AO353_21405 0.75 -0.3 4,688,499 - AO353_21405 0.75 -3.1 4,688,499 - AO353_21405 0.75 +0.7 4,688,642 + AO353_21405 0.84 +0.5 4,688,643 - AO353_21405 0.84 -3.3 4,688,643 - AO353_21405 0.84 +1.8 4,688,646 + AO353_21405 0.84 +2.1 4,688,646 + AO353_21405 0.84 +1.0 4,688,691 + AO353_21405 0.87 -1.3 4,688,691 + AO353_21405 0.87 -2.8 4,688,691 + AO353_21405 0.87 -2.8 4,688,691 + AO353_21405 0.87 -0.8 4,688,692 - AO353_21405 0.87 +1.3 4,688,692 - AO353_21405 0.87 +0.7 4,688,692 - AO353_21405 0.87 -0.3 4,688,692 - AO353_21405 0.87 -0.7 4,688,692 - AO353_21405 0.87 -0.3 4,688,692 - AO353_21405 0.87 +2.0 4,688,692 - AO353_21405 0.87 -1.8 4,688,696 - AO353_21405 0.87 +0.2 4,688,696 - AO353_21405 0.87 -0.3 4,688,775 + -1.3 4,688,775 + +0.5 4,688,775 + +1.5 4,688,776 - +1.7 4,688,776 - -1.8 4,688,776 - -0.3 4,688,776 - -1.8 4,688,778 + +1.3 4,688,778 + +3.0 4,688,778 + +0.4 4,688,779 - -0.3 4,688,779 - -0.7 4,688,779 - +0.6 4,688,789 + -3.3 4,688,789 + +1.1 4,688,789 + +0.3 4,688,789 + -1.8 4,688,789 + +1.9 4,688,789 + +0.5 4,688,789 + -2.6 4,688,789 + -1.8 4,688,789 + -0.7 4,688,789 + +1.4 4,688,789 + +1.3 4,688,789 + +1.5 4,688,789 + -0.3 4,688,789 + -0.1 4,688,789 + +0.5 4,688,789 + -0.3 4,688,790 - -1.3 4,688,790 - -0.8 4,688,790 - -0.3 4,688,790 - -1.8 4,688,790 - +0.7 4,688,790 - -1.3 4,688,790 - +2.3 4,688,790 - +1.3 4,688,790 - -2.3 4,688,790 - -1.3 4,688,790 - +1.4 4,688,790 - -1.3 4,688,791 + -0.3 4,688,876 + +0.9 4,688,963 - +1.3 4,688,986 - -2.6 4,689,167 - AO353_21410 0.65 -3.6 4,689,184 + AO353_21410 0.73 -0.3 4,689,184 + AO353_21410 0.73 +0.7 4,689,184 + AO353_21410 0.73 -0.3 4,689,185 - AO353_21410 0.74 -1.0 4,689,236 + +1.1 4,689,236 + +1.7 4,689,236 + +3.1 4,689,237 - +2.7 4,689,396 + AO353_21415 0.50 -1.6 4,689,396 + AO353_21415 0.50 -1.3 4,689,396 + AO353_21415 0.50 +0.4 4,689,397 - AO353_21415 0.50 -0.3 4,689,397 - AO353_21415 0.50 -0.7 4,689,397 - AO353_21415 0.50 -2.6 4,689,431 + AO353_21415 0.65 +0.6 4,689,431 + AO353_21415 0.65 +3.2 4,689,431 + AO353_21415 0.65 -0.3 4,689,432 - AO353_21415 0.65 +0.7 4,689,432 - AO353_21415 0.65 -2.6 4,689,432 - AO353_21415 0.65 -3.1 4,689,432 - AO353_21415 0.65 +0.4 4,689,432 - AO353_21415 0.65 -1.3 4,689,432 - AO353_21415 0.65 -0.3 4,689,432 - AO353_21415 0.65 +0.2 4,689,513 + -0.3 4,689,514 - +1.2 4,689,532 + -0.3 4,689,532 + -2.6 4,689,533 - -0.0 4,689,533 - -1.8 4,689,620 + +0.7 4,689,621 - -2.3 4,689,621 - -1.3 4,689,621 - -0.7 4,689,621 - -2.3 4,689,621 - -1.8 4,689,737 + AO353_21420 0.34 -1.3 4,689,738 - AO353_21420 0.35 +2.9 4,689,738 - AO353_21420 0.35 +1.5 4,689,749 - AO353_21420 0.41 +0.7 4,689,816 + AO353_21420 0.76 -2.8 4,689,816 + AO353_21420 0.76 -1.8 4,689,816 + AO353_21420 0.76 -1.8 4,689,816 + AO353_21420 0.76 -1.3 4,689,816 + AO353_21420 0.76 -0.3 4,689,816 + AO353_21420 0.76 +2.3 4,689,817 - AO353_21420 0.76 +1.2 4,689,817 - AO353_21420 0.76 -0.3 4,689,817 - -0.3 4,689,817 - AO353_21420 0.76 +0.7 4,689,817 - AO353_21420 0.76 +1.3 4,689,817 - AO353_21420 0.76 -1.1 4,689,817 - AO353_21420 0.76 +1.3 4,689,817 - AO353_21420 0.76 +1.3 4,689,817 - AO353_21420 0.76 +1.2 4,689,817 - AO353_21420 0.76 -1.8 4,689,817 - AO353_21420 0.76 -1.8 4,689,817 - -0.3 4,689,862 + -0.3 4,689,862 + +1.5 4,689,862 + -1.8 4,689,862 + -1.3 4,689,863 - +1.3 4,689,863 - +0.5 4,689,863 - +1.1 4,689,877 + -2.6 4,689,878 - +1.5 4,689,895 - +2.1
Or see this region's nucleotide sequence