Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_21175 and AO353_21180 are separated by 67 nucleotides AO353_21180 and AO353_21185 are separated by 282 nucleotides
AO353_21175: AO353_21175 - hypothetical protein, at 4,632,812 to 4,633,012
_21175
AO353_21180: AO353_21180 - transposase, at 4,633,080 to 4,633,217
_21180
AO353_21185: AO353_21185 - hypothetical protein, at 4,633,500 to 4,634,474
_21185
Position (kb)
4633
4634 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4632.107 kb on - strand at 4632.107 kb on - strand at 4632.201 kb on + strand at 4632.232 kb on - strand at 4632.314 kb on - strand at 4632.453 kb on + strand at 4632.463 kb on + strand at 4632.585 kb on + strand at 4632.590 kb on + strand at 4632.591 kb on - strand at 4632.657 kb on + strand at 4632.680 kb on - strand at 4632.682 kb on - strand at 4632.701 kb on + strand at 4632.702 kb on - strand at 4632.704 kb on - strand at 4632.704 kb on - strand at 4632.732 kb on + strand at 4632.785 kb on + strand at 4632.796 kb on - strand at 4632.796 kb on - strand at 4632.908 kb on + strand, within AO353_21175 at 4632.908 kb on + strand, within AO353_21175 at 4632.908 kb on + strand, within AO353_21175 at 4632.909 kb on - strand, within AO353_21175 at 4632.909 kb on - strand, within AO353_21175 at 4632.930 kb on + strand at 4632.983 kb on + strand, within AO353_21175 at 4632.984 kb on - strand, within AO353_21175 at 4633.058 kb on + strand at 4633.058 kb on + strand at 4633.134 kb on + strand, within AO353_21180 at 4633.134 kb on + strand, within AO353_21180 at 4633.160 kb on + strand, within AO353_21180 at 4633.160 kb on + strand, within AO353_21180 at 4633.161 kb on - strand, within AO353_21180 at 4633.161 kb on - strand, within AO353_21180 at 4633.161 kb on - strand, within AO353_21180 at 4633.161 kb on - strand, within AO353_21180 at 4633.161 kb on - strand, within AO353_21180 at 4633.174 kb on + strand, within AO353_21180 at 4633.174 kb on + strand, within AO353_21180 at 4633.174 kb on + strand, within AO353_21180 at 4633.174 kb on + strand, within AO353_21180 at 4633.174 kb on + strand, within AO353_21180 at 4633.174 kb on + strand, within AO353_21180 at 4633.175 kb on - strand, within AO353_21180 at 4633.175 kb on - strand, within AO353_21180 at 4633.175 kb on - strand, within AO353_21180 at 4633.208 kb on + strand at 4633.208 kb on + strand at 4633.208 kb on + strand at 4633.209 kb on - strand at 4633.209 kb on - strand at 4633.209 kb on - strand at 4633.215 kb on + strand at 4633.220 kb on + strand at 4633.220 kb on + strand at 4633.220 kb on + strand at 4633.221 kb on - strand at 4633.355 kb on - strand at 4633.355 kb on - strand at 4633.355 kb on - strand at 4633.355 kb on - strand at 4633.355 kb on - strand at 4633.355 kb on - strand at 4633.355 kb on - strand at 4633.355 kb on - strand at 4633.355 kb on - strand at 4633.359 kb on - strand at 4633.359 kb on - strand at 4633.447 kb on + strand at 4633.480 kb on + strand at 4633.480 kb on + strand at 4633.480 kb on + strand at 4633.480 kb on + strand at 4633.480 kb on + strand at 4633.704 kb on - strand, within AO353_21185 at 4633.777 kb on - strand, within AO353_21185 at 4633.777 kb on - strand, within AO353_21185 at 4633.777 kb on - strand, within AO353_21185 at 4633.777 kb on - strand, within AO353_21185 at 4633.777 kb on - strand, within AO353_21185 at 4633.951 kb on - strand, within AO353_21185 at 4633.951 kb on - strand, within AO353_21185 at 4633.951 kb on - strand, within AO353_21185 at 4633.951 kb on - strand, within AO353_21185 at 4633.964 kb on + strand, within AO353_21185 at 4633.965 kb on - strand, within AO353_21185 at 4633.965 kb on - strand, within AO353_21185 at 4633.965 kb on - strand, within AO353_21185 at 4633.965 kb on - strand, within AO353_21185 at 4634.007 kb on + strand, within AO353_21185 at 4634.008 kb on - strand, within AO353_21185 at 4634.008 kb on - strand, within AO353_21185 at 4634.105 kb on + strand at 4634.106 kb on - strand, within AO353_21185 at 4634.106 kb on - strand, within AO353_21185 at 4634.133 kb on + strand, within AO353_21185 at 4634.133 kb on + strand, within AO353_21185 at 4634.133 kb on + strand, within AO353_21185 at 4634.133 kb on + strand, within AO353_21185 at 4634.133 kb on + strand, within AO353_21185 at 4634.134 kb on - strand, within AO353_21185 at 4634.134 kb on - strand, within AO353_21185 at 4634.134 kb on - strand, within AO353_21185
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 4,632,107 - -1.2 4,632,107 - -0.5 4,632,201 + +3.6 4,632,232 - +0.5 4,632,314 - -0.5 4,632,453 + -0.2 4,632,463 + -0.2 4,632,585 + -0.2 4,632,590 + +1.4 4,632,591 - +1.8 4,632,657 + +1.8 4,632,680 - -2.5 4,632,682 - -0.2 4,632,701 + -1.2 4,632,702 - +1.4 4,632,704 - +2.4 4,632,704 - -0.2 4,632,732 + -2.8 4,632,785 + -3.5 4,632,796 - +1.8 4,632,796 - +0.2 4,632,908 + AO353_21175 0.48 +0.6 4,632,908 + AO353_21175 0.48 +2.5 4,632,908 + AO353_21175 0.48 +0.1 4,632,909 - AO353_21175 0.48 +3.2 4,632,909 - AO353_21175 0.48 -2.4 4,632,930 + -1.2 4,632,983 + AO353_21175 0.85 -2.2 4,632,984 - AO353_21175 0.86 +2.8 4,633,058 + +0.5 4,633,058 + +1.9 4,633,134 + AO353_21180 0.39 +1.4 4,633,134 + AO353_21180 0.39 -1.5 4,633,160 + AO353_21180 0.58 +2.1 4,633,160 + AO353_21180 0.58 -2.5 4,633,161 - AO353_21180 0.59 -1.6 4,633,161 - AO353_21180 0.59 -0.8 4,633,161 - AO353_21180 0.59 -0.8 4,633,161 - AO353_21180 0.59 +1.4 4,633,161 - AO353_21180 0.59 +0.4 4,633,174 + AO353_21180 0.68 -0.5 4,633,174 + AO353_21180 0.68 -0.4 4,633,174 + AO353_21180 0.68 +0.3 4,633,174 + AO353_21180 0.68 -1.2 4,633,174 + AO353_21180 0.68 -1.8 4,633,174 + AO353_21180 0.68 -1.8 4,633,175 - AO353_21180 0.69 -0.2 4,633,175 - AO353_21180 0.69 -1.2 4,633,175 - AO353_21180 0.69 -1.8 4,633,208 + -1.8 4,633,208 + +2.1 4,633,208 + -2.2 4,633,209 - +1.3 4,633,209 - +0.4 4,633,209 - +1.8 4,633,215 + -1.2 4,633,220 + -0.9 4,633,220 + -1.2 4,633,220 + +1.4 4,633,221 - +0.2 4,633,355 - +1.1 4,633,355 - -0.2 4,633,355 - -1.8 4,633,355 - -1.2 4,633,355 - -0.8 4,633,355 - -1.8 4,633,355 - +1.1 4,633,355 - -2.8 4,633,355 - +1.4 4,633,359 - -1.8 4,633,359 - +0.1 4,633,447 + -2.5 4,633,480 + +0.6 4,633,480 + +0.6 4,633,480 + -0.2 4,633,480 + +0.5 4,633,480 + -0.2 4,633,704 - AO353_21185 0.21 -0.4 4,633,777 - AO353_21185 0.28 -1.2 4,633,777 - AO353_21185 0.28 -0.6 4,633,777 - AO353_21185 0.28 -2.2 4,633,777 - AO353_21185 0.28 -0.0 4,633,777 - AO353_21185 0.28 -0.5 4,633,951 - AO353_21185 0.46 +3.2 4,633,951 - AO353_21185 0.46 +0.4 4,633,951 - AO353_21185 0.46 -1.6 4,633,951 - AO353_21185 0.46 -1.2 4,633,964 + AO353_21185 0.48 -1.2 4,633,965 - AO353_21185 0.48 -0.0 4,633,965 - AO353_21185 0.48 -3.7 4,633,965 - AO353_21185 0.48 -0.2 4,633,965 - AO353_21185 0.48 +1.2 4,634,007 + AO353_21185 0.52 -3.0 4,634,008 - AO353_21185 0.52 -2.2 4,634,008 - AO353_21185 0.52 +1.9 4,634,105 + -0.2 4,634,106 - AO353_21185 0.62 +0.8 4,634,106 - AO353_21185 0.62 -0.2 4,634,133 + AO353_21185 0.65 +0.2 4,634,133 + AO353_21185 0.65 +1.4 4,634,133 + AO353_21185 0.65 -2.2 4,634,133 + AO353_21185 0.65 -1.2 4,634,133 + AO353_21185 0.65 +0.9 4,634,134 - AO353_21185 0.65 -1.5 4,634,134 - AO353_21185 0.65 -0.6 4,634,134 - AO353_21185 0.65 -1.2
Or see this region's nucleotide sequence