Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_19945 and AO353_19950 overlap by 4 nucleotides AO353_19950 and AO353_19955 overlap by 4 nucleotides
AO353_19945: AO353_19945 - acetyl-CoA synthetase, at 4,384,784 to 4,386,550
_19945
AO353_19950: AO353_19950 - pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha, at 4,386,547 to 4,387,530
_19950
AO353_19955: AO353_19955 - pyruvate dehydrogenase, at 4,387,527 to 4,388,507
_19955
Position (kb)
4386
4387
4388 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 4385.560 kb on + strand, within AO353_19945 at 4385.560 kb on + strand, within AO353_19945 at 4385.561 kb on - strand, within AO353_19945 at 4385.561 kb on - strand, within AO353_19945 at 4385.561 kb on - strand, within AO353_19945 at 4385.561 kb on - strand, within AO353_19945 at 4385.561 kb on - strand, within AO353_19945 at 4385.564 kb on + strand, within AO353_19945 at 4385.564 kb on + strand, within AO353_19945 at 4385.564 kb on + strand, within AO353_19945 at 4385.564 kb on + strand, within AO353_19945 at 4385.564 kb on + strand, within AO353_19945 at 4385.564 kb on + strand, within AO353_19945 at 4385.564 kb on + strand, within AO353_19945 at 4385.564 kb on + strand, within AO353_19945 at 4385.564 kb on + strand, within AO353_19945 at 4385.565 kb on - strand, within AO353_19945 at 4385.565 kb on - strand, within AO353_19945 at 4385.565 kb on - strand, within AO353_19945 at 4385.565 kb on - strand, within AO353_19945 at 4385.565 kb on - strand, within AO353_19945 at 4385.565 kb on - strand, within AO353_19945 at 4385.565 kb on - strand, within AO353_19945 at 4385.565 kb on - strand, within AO353_19945 at 4385.565 kb on - strand, within AO353_19945 at 4385.565 kb on - strand, within AO353_19945 at 4385.565 kb on - strand, within AO353_19945 at 4385.565 kb on - strand, within AO353_19945 at 4385.565 kb on - strand, within AO353_19945 at 4385.565 kb on - strand, within AO353_19945 at 4385.565 kb on - strand, within AO353_19945 at 4385.565 kb on - strand, within AO353_19945 at 4385.565 kb on - strand, within AO353_19945 at 4385.717 kb on + strand, within AO353_19945 at 4385.717 kb on + strand, within AO353_19945 at 4385.717 kb on + strand, within AO353_19945 at 4385.717 kb on + strand, within AO353_19945 at 4385.718 kb on - strand, within AO353_19945 at 4385.800 kb on + strand, within AO353_19945 at 4385.801 kb on - strand, within AO353_19945 at 4386.017 kb on + strand, within AO353_19945 at 4386.017 kb on + strand, within AO353_19945 at 4386.018 kb on - strand, within AO353_19945 at 4386.083 kb on + strand, within AO353_19945 at 4386.083 kb on + strand, within AO353_19945 at 4386.083 kb on + strand, within AO353_19945 at 4386.083 kb on + strand, within AO353_19945 at 4386.084 kb on - strand, within AO353_19945 at 4386.084 kb on - strand, within AO353_19945 at 4386.131 kb on + strand, within AO353_19945 at 4386.131 kb on + strand, within AO353_19945 at 4386.131 kb on + strand, within AO353_19945 at 4386.170 kb on + strand, within AO353_19945 at 4386.170 kb on + strand, within AO353_19945 at 4386.170 kb on + strand, within AO353_19945 at 4386.170 kb on + strand, within AO353_19945 at 4386.171 kb on - strand, within AO353_19945 at 4386.171 kb on - strand, within AO353_19945 at 4386.173 kb on + strand, within AO353_19945 at 4386.174 kb on - strand, within AO353_19945 at 4386.174 kb on - strand, within AO353_19945 at 4386.182 kb on - strand, within AO353_19945 at 4386.523 kb on + strand at 4386.575 kb on + strand at 4386.575 kb on + strand at 4386.576 kb on - strand at 4386.676 kb on + strand, within AO353_19950 at 4386.676 kb on + strand, within AO353_19950 at 4386.676 kb on + strand, within AO353_19950 at 4386.676 kb on + strand, within AO353_19950 at 4386.677 kb on - strand, within AO353_19950 at 4386.677 kb on - strand, within AO353_19950 at 4386.677 kb on - strand, within AO353_19950 at 4386.677 kb on - strand, within AO353_19950 at 4386.677 kb on - strand, within AO353_19950 at 4386.677 kb on - strand, within AO353_19950 at 4386.677 kb on - strand, within AO353_19950 at 4386.677 kb on - strand, within AO353_19950 at 4386.677 kb on - strand, within AO353_19950 at 4386.677 kb on - strand, within AO353_19950 at 4386.749 kb on - strand, within AO353_19950 at 4386.811 kb on + strand, within AO353_19950 at 4386.811 kb on + strand, within AO353_19950 at 4386.811 kb on + strand, within AO353_19950 at 4386.811 kb on + strand, within AO353_19950 at 4386.811 kb on + strand, within AO353_19950 at 4386.811 kb on + strand, within AO353_19950 at 4386.811 kb on + strand, within AO353_19950 at 4386.811 kb on + strand, within AO353_19950 at 4386.811 kb on + strand, within AO353_19950 at 4386.811 kb on + strand, within AO353_19950 at 4386.811 kb on + strand, within AO353_19950 at 4386.811 kb on + strand, within AO353_19950 at 4386.811 kb on + strand, within AO353_19950 at 4386.811 kb on + strand, within AO353_19950 at 4386.812 kb on - strand, within AO353_19950 at 4386.812 kb on - strand, within AO353_19950 at 4386.812 kb on - strand, within AO353_19950 at 4386.812 kb on - strand, within AO353_19950 at 4386.812 kb on - strand, within AO353_19950 at 4386.812 kb on - strand, within AO353_19950 at 4386.812 kb on - strand, within AO353_19950 at 4386.812 kb on - strand, within AO353_19950 at 4386.812 kb on - strand, within AO353_19950 at 4386.812 kb on - strand, within AO353_19950 at 4386.812 kb on - strand, within AO353_19950 at 4386.812 kb on - strand, within AO353_19950 at 4386.812 kb on - strand at 4386.812 kb on - strand, within AO353_19950 at 4386.812 kb on - strand, within AO353_19950 at 4386.812 kb on - strand, within AO353_19950 at 4386.812 kb on - strand, within AO353_19950 at 4386.812 kb on - strand, within AO353_19950 at 4387.081 kb on + strand, within AO353_19950 at 4387.081 kb on + strand, within AO353_19950 at 4387.081 kb on + strand, within AO353_19950 at 4387.081 kb on + strand, within AO353_19950 at 4387.082 kb on - strand, within AO353_19950 at 4387.147 kb on + strand, within AO353_19950 at 4387.148 kb on - strand, within AO353_19950 at 4387.148 kb on - strand, within AO353_19950 at 4387.149 kb on + strand, within AO353_19950 at 4387.149 kb on + strand, within AO353_19950 at 4387.150 kb on - strand, within AO353_19950 at 4387.150 kb on - strand, within AO353_19950 at 4387.195 kb on + strand, within AO353_19950 at 4387.196 kb on - strand, within AO353_19950 at 4387.196 kb on - strand, within AO353_19950 at 4387.246 kb on + strand, within AO353_19950 at 4387.267 kb on + strand, within AO353_19950 at 4387.307 kb on - strand, within AO353_19950 at 4387.307 kb on - strand, within AO353_19950 at 4387.307 kb on - strand, within AO353_19950 at 4387.356 kb on + strand, within AO353_19950 at 4387.356 kb on + strand, within AO353_19950 at 4387.356 kb on + strand, within AO353_19950 at 4387.356 kb on + strand, within AO353_19950 at 4387.357 kb on - strand, within AO353_19950 at 4387.360 kb on + strand, within AO353_19950 at 4387.360 kb on + strand, within AO353_19950 at 4387.360 kb on + strand, within AO353_19950 at 4387.360 kb on + strand, within AO353_19950 at 4387.360 kb on + strand, within AO353_19950 at 4387.360 kb on + strand, within AO353_19950 at 4387.360 kb on + strand, within AO353_19950 at 4387.361 kb on - strand, within AO353_19950 at 4387.361 kb on - strand, within AO353_19950 at 4387.361 kb on - strand, within AO353_19950 at 4387.361 kb on - strand, within AO353_19950 at 4387.507 kb on + strand at 4387.507 kb on + strand at 4387.508 kb on - strand at 4387.508 kb on - strand at 4387.508 kb on - strand at 4387.508 kb on - strand at 4387.545 kb on + strand at 4387.630 kb on - strand, within AO353_19955 at 4387.641 kb on + strand, within AO353_19955 at 4387.641 kb on + strand, within AO353_19955 at 4387.641 kb on + strand, within AO353_19955 at 4387.642 kb on - strand, within AO353_19955 at 4387.642 kb on - strand, within AO353_19955 at 4387.642 kb on - strand, within AO353_19955 at 4387.642 kb on - strand, within AO353_19955 at 4387.642 kb on - strand, within AO353_19955 at 4387.642 kb on - strand, within AO353_19955 at 4387.642 kb on - strand, within AO353_19955 at 4387.642 kb on - strand, within AO353_19955 at 4387.685 kb on + strand, within AO353_19955 at 4387.686 kb on - strand, within AO353_19955 at 4387.765 kb on + strand, within AO353_19955 at 4387.766 kb on - strand, within AO353_19955 at 4387.766 kb on - strand, within AO353_19955 at 4387.838 kb on + strand, within AO353_19955 at 4387.838 kb on + strand, within AO353_19955 at 4387.838 kb on + strand, within AO353_19955 at 4387.838 kb on + strand, within AO353_19955 at 4387.838 kb on + strand, within AO353_19955 at 4387.838 kb on + strand, within AO353_19955 at 4387.838 kb on + strand, within AO353_19955 at 4387.838 kb on + strand, within AO353_19955 at 4387.838 kb on + strand, within AO353_19955 at 4387.838 kb on + strand, within AO353_19955 at 4387.838 kb on + strand, within AO353_19955 at 4387.838 kb on + strand, within AO353_19955 at 4387.839 kb on - strand, within AO353_19955 at 4387.839 kb on - strand, within AO353_19955 at 4387.839 kb on - strand, within AO353_19955 at 4387.839 kb on - strand, within AO353_19955 at 4387.839 kb on - strand, within AO353_19955 at 4387.839 kb on - strand, within AO353_19955 at 4387.839 kb on - strand, within AO353_19955 at 4387.839 kb on - strand, within AO353_19955 at 4387.839 kb on - strand, within AO353_19955 at 4387.839 kb on - strand, within AO353_19955 at 4387.839 kb on - strand, within AO353_19955 at 4387.938 kb on + strand, within AO353_19955 at 4388.058 kb on + strand, within AO353_19955 at 4388.058 kb on + strand, within AO353_19955 at 4388.058 kb on + strand, within AO353_19955
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 4,385,560 + AO353_19945 0.44 -2.8 4,385,560 + AO353_19945 0.44 -1.1 4,385,561 - AO353_19945 0.44 -1.2 4,385,561 - AO353_19945 0.44 +0.8 4,385,561 - AO353_19945 0.44 +1.2 4,385,561 - AO353_19945 0.44 -1.2 4,385,561 - AO353_19945 0.44 -1.2 4,385,564 + AO353_19945 0.44 -0.5 4,385,564 + AO353_19945 0.44 +2.1 4,385,564 + AO353_19945 0.44 -1.8 4,385,564 + AO353_19945 0.44 +1.2 4,385,564 + AO353_19945 0.44 -2.5 4,385,564 + AO353_19945 0.44 -0.0 4,385,564 + AO353_19945 0.44 -0.0 4,385,564 + AO353_19945 0.44 -1.2 4,385,564 + AO353_19945 0.44 -0.5 4,385,565 - AO353_19945 0.44 -1.5 4,385,565 - AO353_19945 0.44 +0.8 4,385,565 - AO353_19945 0.44 +1.7 4,385,565 - AO353_19945 0.44 -0.2 4,385,565 - AO353_19945 0.44 -0.2 4,385,565 - AO353_19945 0.44 -2.2 4,385,565 - AO353_19945 0.44 +0.0 4,385,565 - AO353_19945 0.44 +1.4 4,385,565 - AO353_19945 0.44 +2.8 4,385,565 - AO353_19945 0.44 -2.2 4,385,565 - AO353_19945 0.44 +0.1 4,385,565 - AO353_19945 0.44 +1.0 4,385,565 - AO353_19945 0.44 +1.5 4,385,565 - AO353_19945 0.44 -1.0 4,385,565 - AO353_19945 0.44 -1.2 4,385,565 - AO353_19945 0.44 -0.2 4,385,565 - AO353_19945 0.44 -2.2 4,385,717 + AO353_19945 0.53 +0.8 4,385,717 + AO353_19945 0.53 -0.2 4,385,717 + AO353_19945 0.53 +1.7 4,385,717 + AO353_19945 0.53 +1.8 4,385,718 - AO353_19945 0.53 +1.8 4,385,800 + AO353_19945 0.57 +1.4 4,385,801 - AO353_19945 0.58 -1.8 4,386,017 + AO353_19945 0.70 -0.8 4,386,017 + AO353_19945 0.70 -1.8 4,386,018 - AO353_19945 0.70 +1.0 4,386,083 + AO353_19945 0.74 +0.9 4,386,083 + AO353_19945 0.74 -1.2 4,386,083 + AO353_19945 0.74 +2.0 4,386,083 + AO353_19945 0.74 +1.5 4,386,084 - AO353_19945 0.74 -2.2 4,386,084 - AO353_19945 0.74 -0.8 4,386,131 + AO353_19945 0.76 -1.8 4,386,131 + AO353_19945 0.76 -1.2 4,386,131 + AO353_19945 0.76 -0.6 4,386,170 + AO353_19945 0.78 +1.0 4,386,170 + AO353_19945 0.78 -3.4 4,386,170 + AO353_19945 0.78 -2.5 4,386,170 + AO353_19945 0.78 +0.9 4,386,171 - AO353_19945 0.78 +1.4 4,386,171 - AO353_19945 0.78 +0.0 4,386,173 + AO353_19945 0.79 -1.2 4,386,174 - AO353_19945 0.79 -0.2 4,386,174 - AO353_19945 0.79 -1.2 4,386,182 - AO353_19945 0.79 +0.1 4,386,523 + +2.2 4,386,575 + -0.2 4,386,575 + -0.2 4,386,576 - -0.8 4,386,676 + AO353_19950 0.13 +1.2 4,386,676 + AO353_19950 0.13 +2.4 4,386,676 + AO353_19950 0.13 -0.2 4,386,676 + AO353_19950 0.13 -0.8 4,386,677 - AO353_19950 0.13 -1.8 4,386,677 - AO353_19950 0.13 -2.2 4,386,677 - AO353_19950 0.13 -0.1 4,386,677 - AO353_19950 0.13 -0.2 4,386,677 - AO353_19950 0.13 +1.1 4,386,677 - AO353_19950 0.13 +0.8 4,386,677 - AO353_19950 0.13 -0.2 4,386,677 - AO353_19950 0.13 -0.6 4,386,677 - AO353_19950 0.13 +1.6 4,386,677 - AO353_19950 0.13 -2.2 4,386,749 - AO353_19950 0.21 -1.8 4,386,811 + AO353_19950 0.27 +0.8 4,386,811 + AO353_19950 0.27 +1.0 4,386,811 + AO353_19950 0.27 -1.8 4,386,811 + AO353_19950 0.27 -0.2 4,386,811 + AO353_19950 0.27 -1.8 4,386,811 + AO353_19950 0.27 -0.2 4,386,811 + AO353_19950 0.27 +0.2 4,386,811 + AO353_19950 0.27 +1.2 4,386,811 + AO353_19950 0.27 +1.4 4,386,811 + AO353_19950 0.27 -1.2 4,386,811 + AO353_19950 0.27 +2.5 4,386,811 + AO353_19950 0.27 -1.8 4,386,811 + AO353_19950 0.27 +3.1 4,386,811 + AO353_19950 0.27 -2.8 4,386,812 - AO353_19950 0.27 -1.2 4,386,812 - AO353_19950 0.27 +0.4 4,386,812 - AO353_19950 0.27 -1.2 4,386,812 - AO353_19950 0.27 +2.4 4,386,812 - AO353_19950 0.27 -1.8 4,386,812 - AO353_19950 0.27 +0.1 4,386,812 - AO353_19950 0.27 +1.7 4,386,812 - AO353_19950 0.27 -2.2 4,386,812 - AO353_19950 0.27 -1.8 4,386,812 - AO353_19950 0.27 +0.8 4,386,812 - AO353_19950 0.27 +0.5 4,386,812 - AO353_19950 0.27 -0.8 4,386,812 - -0.2 4,386,812 - AO353_19950 0.27 +1.4 4,386,812 - AO353_19950 0.27 -0.2 4,386,812 - AO353_19950 0.27 -0.2 4,386,812 - AO353_19950 0.27 -1.2 4,386,812 - AO353_19950 0.27 +1.7 4,387,081 + AO353_19950 0.54 -1.2 4,387,081 + AO353_19950 0.54 -1.2 4,387,081 + AO353_19950 0.54 -2.2 4,387,081 + AO353_19950 0.54 +2.6 4,387,082 - AO353_19950 0.54 +0.4 4,387,147 + AO353_19950 0.61 -1.2 4,387,148 - AO353_19950 0.61 +0.0 4,387,148 - AO353_19950 0.61 +1.8 4,387,149 + AO353_19950 0.61 +1.4 4,387,149 + AO353_19950 0.61 -2.2 4,387,150 - AO353_19950 0.61 +0.2 4,387,150 - AO353_19950 0.61 -0.2 4,387,195 + AO353_19950 0.66 -0.2 4,387,196 - AO353_19950 0.66 +0.8 4,387,196 - AO353_19950 0.66 +0.6 4,387,246 + AO353_19950 0.71 -1.2 4,387,267 + AO353_19950 0.73 -2.2 4,387,307 - AO353_19950 0.77 -2.2 4,387,307 - AO353_19950 0.77 -1.2 4,387,307 - AO353_19950 0.77 -2.2 4,387,356 + AO353_19950 0.82 +0.8 4,387,356 + AO353_19950 0.82 -3.2 4,387,356 + AO353_19950 0.82 +1.6 4,387,356 + AO353_19950 0.82 -1.2 4,387,357 - AO353_19950 0.82 -2.2 4,387,360 + AO353_19950 0.83 -0.2 4,387,360 + AO353_19950 0.83 -0.9 4,387,360 + AO353_19950 0.83 -1.8 4,387,360 + AO353_19950 0.83 -2.5 4,387,360 + AO353_19950 0.83 +4.3 4,387,360 + AO353_19950 0.83 -0.2 4,387,360 + AO353_19950 0.83 +1.0 4,387,361 - AO353_19950 0.83 -1.2 4,387,361 - AO353_19950 0.83 -0.2 4,387,361 - AO353_19950 0.83 -1.5 4,387,361 - AO353_19950 0.83 -0.6 4,387,507 + -2.2 4,387,507 + +1.6 4,387,508 - -0.4 4,387,508 - +1.1 4,387,508 - -1.8 4,387,508 - -1.8 4,387,545 + -0.4 4,387,630 - AO353_19955 0.10 -1.8 4,387,641 + AO353_19955 0.12 +0.4 4,387,641 + AO353_19955 0.12 -2.2 4,387,641 + AO353_19955 0.12 -1.8 4,387,642 - AO353_19955 0.12 -1.2 4,387,642 - AO353_19955 0.12 +2.7 4,387,642 - AO353_19955 0.12 -2.2 4,387,642 - AO353_19955 0.12 -1.2 4,387,642 - AO353_19955 0.12 -0.2 4,387,642 - AO353_19955 0.12 -1.8 4,387,642 - AO353_19955 0.12 -1.8 4,387,642 - AO353_19955 0.12 -0.8 4,387,685 + AO353_19955 0.16 -1.2 4,387,686 - AO353_19955 0.16 -1.4 4,387,765 + AO353_19955 0.24 -0.4 4,387,766 - AO353_19955 0.24 +2.4 4,387,766 - AO353_19955 0.24 -2.5 4,387,838 + AO353_19955 0.32 -1.2 4,387,838 + AO353_19955 0.32 -0.2 4,387,838 + AO353_19955 0.32 +2.1 4,387,838 + AO353_19955 0.32 -0.8 4,387,838 + AO353_19955 0.32 -1.2 4,387,838 + AO353_19955 0.32 +0.1 4,387,838 + AO353_19955 0.32 -2.5 4,387,838 + AO353_19955 0.32 +0.8 4,387,838 + AO353_19955 0.32 +2.0 4,387,838 + AO353_19955 0.32 -0.2 4,387,838 + AO353_19955 0.32 +0.4 4,387,838 + AO353_19955 0.32 +1.4 4,387,839 - AO353_19955 0.32 -1.9 4,387,839 - AO353_19955 0.32 -1.2 4,387,839 - AO353_19955 0.32 -1.8 4,387,839 - AO353_19955 0.32 +0.6 4,387,839 - AO353_19955 0.32 -2.2 4,387,839 - AO353_19955 0.32 -1.2 4,387,839 - AO353_19955 0.32 +1.1 4,387,839 - AO353_19955 0.32 -0.4 4,387,839 - AO353_19955 0.32 +0.0 4,387,839 - AO353_19955 0.32 -0.2 4,387,839 - AO353_19955 0.32 -1.2 4,387,938 + AO353_19955 0.42 -0.2 4,388,058 + AO353_19955 0.54 -3.0 4,388,058 + AO353_19955 0.54 +2.3 4,388,058 + AO353_19955 0.54 -1.2
Or see this region's nucleotide sequence