Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_17905 and AO353_17910 are separated by 225 nucleotides AO353_17910 and AO353_17915 are separated by 77 nucleotides AO353_17915 and AO353_17920 are separated by 73 nucleotides
AO353_17905: AO353_17905 - RND transporter, at 3,941,637 to 3,944,870
_17905
AO353_17910: AO353_17910 - hypothetical protein, at 3,945,096 to 3,945,500
_17910
AO353_17915: AO353_17915 - hypothetical protein, at 3,945,578 to 3,945,988
_17915
AO353_17920: AO353_17920 - histidine kinase, at 3,946,062 to 3,947,441
_17920
Position (kb)
3945
3946 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3944.627 kb on + strand at 3944.628 kb on - strand at 3944.628 kb on - strand at 3944.668 kb on + strand at 3944.668 kb on + strand at 3944.668 kb on + strand at 3944.668 kb on + strand at 3944.668 kb on + strand at 3944.668 kb on + strand at 3944.668 kb on + strand at 3944.668 kb on + strand at 3944.668 kb on + strand at 3944.669 kb on - strand at 3944.669 kb on - strand at 3944.669 kb on - strand at 3944.669 kb on - strand at 3944.669 kb on - strand at 3944.669 kb on - strand at 3944.669 kb on - strand at 3944.669 kb on - strand at 3944.669 kb on - strand at 3944.669 kb on - strand at 3944.672 kb on + strand at 3944.672 kb on + strand at 3944.672 kb on + strand at 3944.672 kb on + strand at 3944.672 kb on + strand at 3944.672 kb on + strand at 3944.672 kb on + strand at 3944.672 kb on + strand at 3944.672 kb on + strand at 3944.672 kb on + strand at 3944.673 kb on - strand at 3944.673 kb on - strand at 3944.673 kb on - strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.674 kb on + strand at 3944.675 kb on - strand at 3944.675 kb on - strand at 3944.675 kb on - strand at 3944.675 kb on - strand at 3944.675 kb on - strand at 3944.675 kb on - strand at 3944.675 kb on - strand at 3944.675 kb on - strand at 3944.675 kb on - strand at 3944.675 kb on - strand at 3944.675 kb on - strand at 3944.675 kb on - strand at 3944.675 kb on - strand at 3944.675 kb on - strand at 3944.675 kb on - strand at 3944.675 kb on - strand at 3944.675 kb on - strand at 3944.675 kb on - strand at 3944.675 kb on - strand at 3944.675 kb on - strand at 3944.675 kb on - strand at 3944.675 kb on - strand at 3944.693 kb on + strand at 3944.716 kb on + strand at 3944.716 kb on + strand at 3944.716 kb on + strand at 3944.716 kb on + strand at 3944.717 kb on - strand at 3944.717 kb on - strand at 3944.826 kb on - strand at 3944.834 kb on - strand at 3944.927 kb on + strand at 3944.927 kb on + strand at 3944.928 kb on - strand at 3945.116 kb on - strand at 3945.116 kb on - strand at 3945.273 kb on + strand, within AO353_17910 at 3945.373 kb on - strand, within AO353_17910 at 3945.373 kb on - strand, within AO353_17910 at 3945.400 kb on - strand, within AO353_17910 at 3945.406 kb on + strand, within AO353_17910 at 3945.406 kb on + strand, within AO353_17910 at 3945.406 kb on + strand, within AO353_17910 at 3945.407 kb on - strand, within AO353_17910 at 3945.407 kb on - strand, within AO353_17910 at 3945.407 kb on - strand, within AO353_17910 at 3945.407 kb on - strand, within AO353_17910 at 3945.407 kb on - strand, within AO353_17910 at 3945.410 kb on + strand, within AO353_17910 at 3945.410 kb on + strand, within AO353_17910 at 3945.410 kb on + strand, within AO353_17910 at 3945.410 kb on + strand, within AO353_17910 at 3945.410 kb on + strand, within AO353_17910 at 3945.410 kb on + strand, within AO353_17910 at 3945.410 kb on + strand, within AO353_17910 at 3945.411 kb on - strand, within AO353_17910 at 3945.411 kb on - strand, within AO353_17910 at 3945.411 kb on - strand, within AO353_17910 at 3945.411 kb on - strand, within AO353_17910 at 3945.411 kb on - strand, within AO353_17910 at 3945.411 kb on - strand, within AO353_17910 at 3945.411 kb on - strand, within AO353_17910 at 3945.411 kb on - strand, within AO353_17910 at 3945.411 kb on - strand, within AO353_17910 at 3945.411 kb on - strand, within AO353_17910 at 3945.411 kb on - strand, within AO353_17910 at 3945.411 kb on - strand, within AO353_17910 at 3945.498 kb on + strand at 3945.498 kb on + strand at 3945.498 kb on + strand at 3945.498 kb on + strand at 3945.499 kb on - strand at 3945.557 kb on + strand at 3945.557 kb on + strand at 3945.558 kb on - strand at 3945.558 kb on - strand at 3945.586 kb on + strand at 3945.586 kb on + strand at 3945.586 kb on + strand at 3945.586 kb on + strand at 3945.586 kb on + strand at 3945.586 kb on + strand at 3945.586 kb on + strand at 3945.587 kb on - strand at 3945.587 kb on - strand at 3945.587 kb on - strand at 3945.587 kb on - strand at 3945.587 kb on - strand at 3945.587 kb on - strand at 3945.587 kb on - strand at 3945.587 kb on - strand at 3945.587 kb on - strand at 3945.739 kb on + strand, within AO353_17915 at 3945.740 kb on - strand, within AO353_17915 at 3945.854 kb on + strand, within AO353_17915 at 3945.854 kb on + strand, within AO353_17915 at 3945.881 kb on + strand, within AO353_17915 at 3945.881 kb on + strand, within AO353_17915 at 3945.881 kb on + strand, within AO353_17915 at 3945.881 kb on + strand, within AO353_17915 at 3945.881 kb on + strand, within AO353_17915 at 3945.881 kb on + strand, within AO353_17915 at 3945.881 kb on + strand, within AO353_17915 at 3945.881 kb on + strand, within AO353_17915 at 3945.881 kb on + strand, within AO353_17915 at 3945.882 kb on - strand, within AO353_17915 at 3945.882 kb on - strand, within AO353_17915 at 3945.882 kb on - strand, within AO353_17915 at 3945.882 kb on - strand, within AO353_17915 at 3945.882 kb on - strand, within AO353_17915 at 3945.882 kb on - strand, within AO353_17915 at 3945.970 kb on + strand at 3945.970 kb on + strand at 3945.970 kb on + strand at 3945.971 kb on - strand at 3945.971 kb on - strand at 3945.971 kb on - strand at 3945.971 kb on - strand at 3945.971 kb on - strand at 3946.015 kb on - strand at 3946.040 kb on + strand at 3946.040 kb on + strand at 3946.041 kb on - strand at 3946.041 kb on - strand at 3946.041 kb on - strand at 3946.041 kb on - strand at 3946.041 kb on - strand at 3946.064 kb on - strand at 3946.210 kb on + strand, within AO353_17920 at 3946.211 kb on - strand, within AO353_17920 at 3946.224 kb on + strand, within AO353_17920 at 3946.224 kb on + strand, within AO353_17920 at 3946.225 kb on - strand, within AO353_17920 at 3946.225 kb on - strand, within AO353_17920 at 3946.419 kb on + strand, within AO353_17920 at 3946.465 kb on + strand, within AO353_17920 at 3946.465 kb on + strand, within AO353_17920 at 3946.465 kb on + strand, within AO353_17920 at 3946.465 kb on + strand, within AO353_17920 at 3946.465 kb on + strand, within AO353_17920 at 3946.465 kb on + strand, within AO353_17920 at 3946.466 kb on - strand, within AO353_17920 at 3946.466 kb on - strand, within AO353_17920 at 3946.466 kb on - strand, within AO353_17920 at 3946.466 kb on - strand, within AO353_17920 at 3946.466 kb on - strand, within AO353_17920 at 3946.466 kb on - strand, within AO353_17920 at 3946.466 kb on - strand, within AO353_17920 at 3946.584 kb on - strand, within AO353_17920 at 3946.653 kb on - strand, within AO353_17920 at 3946.657 kb on + strand, within AO353_17920 at 3946.657 kb on + strand, within AO353_17920 at 3946.657 kb on + strand, within AO353_17920 at 3946.658 kb on - strand, within AO353_17920 at 3946.658 kb on - strand, within AO353_17920 at 3946.658 kb on - strand, within AO353_17920 at 3946.658 kb on - strand, within AO353_17920 at 3946.658 kb on - strand, within AO353_17920 at 3946.671 kb on + strand, within AO353_17920 at 3946.671 kb on + strand, within AO353_17920 at 3946.671 kb on + strand, within AO353_17920 at 3946.671 kb on + strand, within AO353_17920 at 3946.671 kb on + strand, within AO353_17920 at 3946.671 kb on + strand, within AO353_17920 at 3946.672 kb on - strand, within AO353_17920 at 3946.672 kb on - strand, within AO353_17920 at 3946.672 kb on - strand, within AO353_17920 at 3946.672 kb on - strand, within AO353_17920 at 3946.672 kb on - strand, within AO353_17920 at 3946.672 kb on - strand, within AO353_17920 at 3946.672 kb on - strand, within AO353_17920 at 3946.672 kb on - strand, within AO353_17920 at 3946.672 kb on - strand, within AO353_17920 at 3946.673 kb on + strand, within AO353_17920 at 3946.673 kb on + strand, within AO353_17920 at 3946.674 kb on - strand, within AO353_17920 at 3946.674 kb on - strand, within AO353_17920 at 3946.718 kb on + strand, within AO353_17920 at 3946.719 kb on - strand, within AO353_17920 at 3946.784 kb on + strand, within AO353_17920 at 3946.784 kb on + strand, within AO353_17920 at 3946.784 kb on + strand, within AO353_17920 at 3946.785 kb on - strand, within AO353_17920 at 3946.940 kb on + strand, within AO353_17920 at 3946.941 kb on - strand, within AO353_17920
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 3,944,627 + -0.1 3,944,628 - -1.1 3,944,628 - -2.1 3,944,668 + -2.1 3,944,668 + -2.4 3,944,668 + -0.1 3,944,668 + +1.9 3,944,668 + -1.1 3,944,668 + -1.9 3,944,668 + +0.7 3,944,668 + +1.9 3,944,668 + +1.9 3,944,669 - +1.5 3,944,669 - -1.1 3,944,669 - +0.3 3,944,669 - -1.1 3,944,669 - +1.5 3,944,669 - +1.3 3,944,669 - -1.1 3,944,669 - +0.9 3,944,669 - -0.1 3,944,669 - +1.0 3,944,672 + -0.1 3,944,672 + -2.4 3,944,672 + -1.1 3,944,672 + -2.1 3,944,672 + -0.9 3,944,672 + -0.1 3,944,672 + +1.5 3,944,672 + -0.1 3,944,672 + +0.4 3,944,672 + -2.1 3,944,673 - -0.6 3,944,673 - +1.3 3,944,673 - -1.1 3,944,674 + -0.1 3,944,674 + -2.4 3,944,674 + +1.5 3,944,674 + +0.9 3,944,674 + +3.3 3,944,674 + +0.5 3,944,674 + +0.8 3,944,674 + +0.7 3,944,674 + +0.4 3,944,674 + +0.3 3,944,674 + -0.1 3,944,674 + +0.8 3,944,674 + +0.5 3,944,674 + -2.1 3,944,674 + -1.6 3,944,674 + -1.1 3,944,674 + +3.3 3,944,674 + +0.7 3,944,674 + +2.9 3,944,674 + -1.6 3,944,674 + +1.8 3,944,674 + -3.2 3,944,674 + +0.3 3,944,674 + -1.6 3,944,674 + +1.7 3,944,674 + -2.1 3,944,674 + +1.6 3,944,674 + -1.6 3,944,674 + -2.4 3,944,674 + -1.1 3,944,674 + +1.8 3,944,674 + -0.1 3,944,674 + +0.2 3,944,674 + -1.1 3,944,674 + -0.1 3,944,675 - +2.3 3,944,675 - +0.3 3,944,675 - +1.3 3,944,675 - -1.6 3,944,675 - +2.0 3,944,675 - +0.7 3,944,675 - -0.1 3,944,675 - -1.1 3,944,675 - -2.6 3,944,675 - -0.5 3,944,675 - -2.1 3,944,675 - +2.1 3,944,675 - -2.1 3,944,675 - -0.1 3,944,675 - +0.9 3,944,675 - -0.5 3,944,675 - +1.3 3,944,675 - -1.6 3,944,675 - +1.3 3,944,675 - -1.6 3,944,675 - +0.5 3,944,675 - -0.4 3,944,693 + +0.2 3,944,716 + -1.6 3,944,716 + -1.6 3,944,716 + -0.1 3,944,716 + -2.1 3,944,717 - +0.5 3,944,717 - +0.3 3,944,826 - +1.4 3,944,834 - -1.1 3,944,927 + +0.5 3,944,927 + -2.4 3,944,928 - +0.5 3,945,116 - -0.1 3,945,116 - +0.4 3,945,273 + AO353_17910 0.44 +1.7 3,945,373 - AO353_17910 0.68 -1.1 3,945,373 - AO353_17910 0.68 -2.4 3,945,400 - AO353_17910 0.75 +1.2 3,945,406 + AO353_17910 0.77 -2.9 3,945,406 + AO353_17910 0.77 -2.1 3,945,406 + AO353_17910 0.77 +0.7 3,945,407 - AO353_17910 0.77 +1.1 3,945,407 - AO353_17910 0.77 +2.5 3,945,407 - AO353_17910 0.77 -0.6 3,945,407 - AO353_17910 0.77 -1.1 3,945,407 - AO353_17910 0.77 -1.1 3,945,410 + AO353_17910 0.78 +0.4 3,945,410 + AO353_17910 0.78 -2.1 3,945,410 + AO353_17910 0.78 +1.6 3,945,410 + AO353_17910 0.78 -0.3 3,945,410 + AO353_17910 0.78 +0.5 3,945,410 + AO353_17910 0.78 +1.8 3,945,410 + AO353_17910 0.78 -0.2 3,945,411 - AO353_17910 0.78 -2.1 3,945,411 - AO353_17910 0.78 -0.6 3,945,411 - AO353_17910 0.78 -0.1 3,945,411 - AO353_17910 0.78 -1.1 3,945,411 - AO353_17910 0.78 -3.4 3,945,411 - AO353_17910 0.78 +0.8 3,945,411 - AO353_17910 0.78 -0.1 3,945,411 - AO353_17910 0.78 +0.8 3,945,411 - AO353_17910 0.78 -3.1 3,945,411 - AO353_17910 0.78 +3.3 3,945,411 - AO353_17910 0.78 +0.5 3,945,411 - AO353_17910 0.78 +1.8 3,945,498 + -1.1 3,945,498 + -1.1 3,945,498 + -0.1 3,945,498 + -2.1 3,945,499 - -0.1 3,945,557 + -0.3 3,945,557 + -0.3 3,945,558 - +1.9 3,945,558 - -1.1 3,945,586 + +1.4 3,945,586 + -1.1 3,945,586 + +1.3 3,945,586 + +0.1 3,945,586 + +2.2 3,945,586 + +1.7 3,945,586 + +1.2 3,945,587 - +0.9 3,945,587 - +0.5 3,945,587 - +0.6 3,945,587 - +2.3 3,945,587 - -1.1 3,945,587 - +0.3 3,945,587 - -1.6 3,945,587 - +0.5 3,945,587 - +0.9 3,945,739 + AO353_17915 0.39 -1.4 3,945,740 - AO353_17915 0.39 -2.1 3,945,854 + AO353_17915 0.67 -1.1 3,945,854 + AO353_17915 0.67 +0.8 3,945,881 + AO353_17915 0.74 -1.1 3,945,881 + AO353_17915 0.74 -1.9 3,945,881 + AO353_17915 0.74 -1.6 3,945,881 + AO353_17915 0.74 -1.6 3,945,881 + AO353_17915 0.74 +2.9 3,945,881 + AO353_17915 0.74 -0.1 3,945,881 + AO353_17915 0.74 -2.1 3,945,881 + AO353_17915 0.74 -0.8 3,945,881 + AO353_17915 0.74 -1.1 3,945,882 - AO353_17915 0.74 -2.4 3,945,882 - AO353_17915 0.74 -2.4 3,945,882 - AO353_17915 0.74 -2.1 3,945,882 - AO353_17915 0.74 -0.1 3,945,882 - AO353_17915 0.74 -2.9 3,945,882 - AO353_17915 0.74 -1.6 3,945,970 + -2.1 3,945,970 + -0.1 3,945,970 + +0.1 3,945,971 - -2.4 3,945,971 - -2.6 3,945,971 - +3.5 3,945,971 - -1.6 3,945,971 - -0.4 3,946,015 - -0.3 3,946,040 + -2.4 3,946,040 + -0.1 3,946,041 - -2.4 3,946,041 - +2.3 3,946,041 - +2.4 3,946,041 - +0.9 3,946,041 - +0.3 3,946,064 - +1.1 3,946,210 + AO353_17920 0.11 -0.1 3,946,211 - AO353_17920 0.11 -2.4 3,946,224 + AO353_17920 0.12 +0.7 3,946,224 + AO353_17920 0.12 -0.1 3,946,225 - AO353_17920 0.12 -1.1 3,946,225 - AO353_17920 0.12 -0.4 3,946,419 + AO353_17920 0.26 +0.9 3,946,465 + AO353_17920 0.29 -0.1 3,946,465 + AO353_17920 0.29 +1.1 3,946,465 + AO353_17920 0.29 -1.1 3,946,465 + AO353_17920 0.29 +0.8 3,946,465 + AO353_17920 0.29 +0.9 3,946,465 + AO353_17920 0.29 +0.4 3,946,466 - AO353_17920 0.29 -0.6 3,946,466 - AO353_17920 0.29 +0.2 3,946,466 - AO353_17920 0.29 +1.9 3,946,466 - AO353_17920 0.29 +0.8 3,946,466 - AO353_17920 0.29 -0.1 3,946,466 - AO353_17920 0.29 +1.4 3,946,466 - AO353_17920 0.29 +0.2 3,946,584 - AO353_17920 0.38 +1.8 3,946,653 - AO353_17920 0.43 +1.5 3,946,657 + AO353_17920 0.43 -0.1 3,946,657 + AO353_17920 0.43 +1.5 3,946,657 + AO353_17920 0.43 -0.6 3,946,658 - AO353_17920 0.43 +0.9 3,946,658 - AO353_17920 0.43 -1.9 3,946,658 - AO353_17920 0.43 -1.6 3,946,658 - AO353_17920 0.43 -1.6 3,946,658 - AO353_17920 0.43 +0.9 3,946,671 + AO353_17920 0.44 +1.8 3,946,671 + AO353_17920 0.44 -2.6 3,946,671 + AO353_17920 0.44 -2.2 3,946,671 + AO353_17920 0.44 -1.6 3,946,671 + AO353_17920 0.44 +0.6 3,946,671 + AO353_17920 0.44 -1.1 3,946,672 - AO353_17920 0.44 -1.1 3,946,672 - AO353_17920 0.44 -2.1 3,946,672 - AO353_17920 0.44 -1.1 3,946,672 - AO353_17920 0.44 -0.1 3,946,672 - AO353_17920 0.44 +1.4 3,946,672 - AO353_17920 0.44 +2.5 3,946,672 - AO353_17920 0.44 -0.5 3,946,672 - AO353_17920 0.44 -2.1 3,946,672 - AO353_17920 0.44 -2.4 3,946,673 + AO353_17920 0.44 +0.4 3,946,673 + AO353_17920 0.44 +3.5 3,946,674 - AO353_17920 0.44 -1.1 3,946,674 - AO353_17920 0.44 -1.6 3,946,718 + AO353_17920 0.48 -2.1 3,946,719 - AO353_17920 0.48 -1.6 3,946,784 + AO353_17920 0.52 -0.1 3,946,784 + AO353_17920 0.52 +0.2 3,946,784 + AO353_17920 0.52 +2.1 3,946,785 - AO353_17920 0.52 +0.8 3,946,940 + AO353_17920 0.64 +3.6 3,946,941 - AO353_17920 0.64 +1.9
Or see this region's nucleotide sequence