Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_13130 and AO353_13135 overlap by 4 nucleotides AO353_13135 and AO353_13140 overlap by 1 nucleotides
AO353_13130: AO353_13130 - N-acetylmuramoyl-L-alanine amidase, at 2,909,180 to 2,910,616
_13130
AO353_13135: AO353_13135 - DNA mismatch repair protein, at 2,910,613 to 2,912,523
_13135
AO353_13140: AO353_13140 - tRNA dimethylallyltransferase, at 2,912,523 to 2,913,494
_13140
Position (kb)
2910
2911
2912
2913 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2910.410 kb on + strand, within AO353_13130 at 2910.410 kb on + strand, within AO353_13130 at 2910.410 kb on + strand, within AO353_13130 at 2910.410 kb on + strand, within AO353_13130 at 2910.410 kb on + strand, within AO353_13130 at 2910.410 kb on + strand, within AO353_13130 at 2910.410 kb on + strand, within AO353_13130 at 2910.411 kb on - strand, within AO353_13130 at 2910.759 kb on + strand at 2910.759 kb on + strand at 2910.759 kb on + strand at 2910.760 kb on - strand at 2911.397 kb on - strand, within AO353_13135 at 2911.459 kb on + strand, within AO353_13135 at 2911.600 kb on + strand, within AO353_13135 at 2911.600 kb on + strand, within AO353_13135 at 2911.600 kb on + strand, within AO353_13135 at 2911.601 kb on - strand, within AO353_13135 at 2911.601 kb on - strand, within AO353_13135 at 2911.601 kb on - strand, within AO353_13135 at 2911.673 kb on + strand, within AO353_13135 at 2911.673 kb on + strand, within AO353_13135 at 2911.776 kb on + strand, within AO353_13135 at 2911.776 kb on + strand, within AO353_13135 at 2911.777 kb on - strand, within AO353_13135 at 2911.777 kb on - strand, within AO353_13135 at 2911.779 kb on + strand, within AO353_13135 at 2911.779 kb on + strand, within AO353_13135 at 2911.779 kb on + strand, within AO353_13135 at 2911.780 kb on - strand, within AO353_13135 at 2911.780 kb on - strand, within AO353_13135 at 2911.816 kb on + strand, within AO353_13135 at 2911.817 kb on - strand, within AO353_13135 at 2911.817 kb on - strand, within AO353_13135 at 2911.822 kb on + strand, within AO353_13135 at 2911.822 kb on + strand, within AO353_13135 at 2911.822 kb on + strand, within AO353_13135 at 2911.822 kb on + strand, within AO353_13135 at 2911.822 kb on + strand, within AO353_13135 at 2911.822 kb on + strand, within AO353_13135 at 2911.823 kb on - strand, within AO353_13135 at 2911.823 kb on - strand, within AO353_13135 at 2911.823 kb on - strand, within AO353_13135 at 2911.823 kb on - strand, within AO353_13135 at 2911.938 kb on + strand, within AO353_13135 at 2911.938 kb on + strand, within AO353_13135 at 2911.981 kb on + strand, within AO353_13135 at 2911.981 kb on + strand, within AO353_13135 at 2911.981 kb on + strand, within AO353_13135 at 2911.981 kb on + strand, within AO353_13135 at 2911.981 kb on + strand, within AO353_13135 at 2911.981 kb on + strand, within AO353_13135 at 2911.981 kb on + strand, within AO353_13135 at 2911.981 kb on + strand, within AO353_13135 at 2911.981 kb on + strand, within AO353_13135 at 2911.982 kb on - strand, within AO353_13135 at 2911.982 kb on - strand, within AO353_13135 at 2911.982 kb on - strand, within AO353_13135 at 2911.982 kb on - strand, within AO353_13135 at 2911.982 kb on - strand, within AO353_13135 at 2911.982 kb on - strand, within AO353_13135 at 2911.982 kb on - strand, within AO353_13135 at 2911.982 kb on - strand, within AO353_13135 at 2911.982 kb on - strand, within AO353_13135 at 2911.982 kb on - strand, within AO353_13135 at 2911.982 kb on - strand, within AO353_13135 at 2911.982 kb on - strand, within AO353_13135 at 2911.982 kb on - strand, within AO353_13135 at 2912.050 kb on + strand, within AO353_13135 at 2912.050 kb on + strand, within AO353_13135 at 2912.050 kb on + strand, within AO353_13135 at 2912.050 kb on + strand, within AO353_13135 at 2912.050 kb on + strand, within AO353_13135 at 2912.050 kb on + strand, within AO353_13135 at 2912.050 kb on + strand, within AO353_13135 at 2912.050 kb on + strand, within AO353_13135 at 2912.050 kb on + strand, within AO353_13135 at 2912.050 kb on + strand, within AO353_13135 at 2912.051 kb on - strand, within AO353_13135 at 2912.051 kb on - strand, within AO353_13135 at 2912.051 kb on - strand, within AO353_13135 at 2912.051 kb on - strand, within AO353_13135 at 2912.051 kb on - strand, within AO353_13135 at 2912.279 kb on + strand, within AO353_13135 at 2912.279 kb on + strand, within AO353_13135 at 2912.279 kb on + strand, within AO353_13135 at 2912.279 kb on + strand, within AO353_13135 at 2912.280 kb on - strand, within AO353_13135 at 2912.280 kb on - strand, within AO353_13135 at 2912.280 kb on - strand, within AO353_13135 at 2912.367 kb on + strand at 2912.545 kb on + strand at 2912.807 kb on + strand, within AO353_13140 at 2912.838 kb on + strand, within AO353_13140 at 2912.839 kb on - strand, within AO353_13140 at 2912.841 kb on + strand, within AO353_13140 at 2912.842 kb on - strand, within AO353_13140 at 2912.842 kb on - strand, within AO353_13140 at 2912.842 kb on - strand, within AO353_13140 at 2912.842 kb on - strand, within AO353_13140 at 2912.842 kb on - strand, within AO353_13140 at 2912.842 kb on - strand, within AO353_13140 at 2913.050 kb on + strand, within AO353_13140 at 2913.125 kb on + strand, within AO353_13140 at 2913.125 kb on + strand, within AO353_13140 at 2913.126 kb on - strand, within AO353_13140 at 2913.126 kb on - strand, within AO353_13140 at 2913.126 kb on - strand, within AO353_13140 at 2913.180 kb on - strand, within AO353_13140 at 2913.183 kb on - strand, within AO353_13140 at 2913.242 kb on + strand, within AO353_13140 at 2913.242 kb on + strand, within AO353_13140 at 2913.242 kb on + strand, within AO353_13140 at 2913.277 kb on + strand, within AO353_13140 at 2913.278 kb on - strand, within AO353_13140 at 2913.286 kb on + strand, within AO353_13140 at 2913.286 kb on + strand, within AO353_13140 at 2913.287 kb on - strand, within AO353_13140 at 2913.415 kb on + strand at 2913.465 kb on + strand at 2913.513 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 2,910,410 + AO353_13130 0.86 +0.1 2,910,410 + AO353_13130 0.86 -2.0 2,910,410 + AO353_13130 0.86 -2.3 2,910,410 + AO353_13130 0.86 +0.3 2,910,410 + AO353_13130 0.86 -0.7 2,910,410 + AO353_13130 0.86 -1.7 2,910,410 + AO353_13130 0.86 -2.7 2,910,411 - AO353_13130 0.86 -0.7 2,910,759 + -2.0 2,910,759 + -2.0 2,910,759 + -2.0 2,910,760 - +1.3 2,911,397 - AO353_13135 0.41 +2.3 2,911,459 + AO353_13135 0.44 +1.5 2,911,600 + AO353_13135 0.52 +1.6 2,911,600 + AO353_13135 0.52 -2.0 2,911,600 + AO353_13135 0.52 +2.1 2,911,601 - AO353_13135 0.52 -1.7 2,911,601 - AO353_13135 0.52 -0.3 2,911,601 - AO353_13135 0.52 +0.0 2,911,673 + AO353_13135 0.55 +1.5 2,911,673 + AO353_13135 0.55 +0.7 2,911,776 + AO353_13135 0.61 +1.3 2,911,776 + AO353_13135 0.61 -0.1 2,911,777 - AO353_13135 0.61 +1.9 2,911,777 - AO353_13135 0.61 +1.9 2,911,779 + AO353_13135 0.61 +4.0 2,911,779 + AO353_13135 0.61 -0.3 2,911,779 + AO353_13135 0.61 +0.1 2,911,780 - AO353_13135 0.61 +3.6 2,911,780 - AO353_13135 0.61 +0.9 2,911,816 + AO353_13135 0.63 +0.3 2,911,817 - AO353_13135 0.63 +1.2 2,911,817 - AO353_13135 0.63 -0.4 2,911,822 + AO353_13135 0.63 -2.3 2,911,822 + AO353_13135 0.63 +1.8 2,911,822 + AO353_13135 0.63 -3.4 2,911,822 + AO353_13135 0.63 +0.9 2,911,822 + AO353_13135 0.63 -0.2 2,911,822 + AO353_13135 0.63 -0.1 2,911,823 - AO353_13135 0.63 +1.2 2,911,823 - AO353_13135 0.63 +2.6 2,911,823 - AO353_13135 0.63 -0.7 2,911,823 - AO353_13135 0.63 +2.3 2,911,938 + AO353_13135 0.69 -0.1 2,911,938 + AO353_13135 0.69 +0.5 2,911,981 + AO353_13135 0.72 -1.3 2,911,981 + AO353_13135 0.72 -1.7 2,911,981 + AO353_13135 0.72 +0.4 2,911,981 + AO353_13135 0.72 +1.0 2,911,981 + AO353_13135 0.72 +1.3 2,911,981 + AO353_13135 0.72 +3.1 2,911,981 + AO353_13135 0.72 +1.2 2,911,981 + AO353_13135 0.72 +1.4 2,911,981 + AO353_13135 0.72 +0.3 2,911,982 - AO353_13135 0.72 +0.3 2,911,982 - AO353_13135 0.72 +2.1 2,911,982 - AO353_13135 0.72 +2.2 2,911,982 - AO353_13135 0.72 -1.0 2,911,982 - AO353_13135 0.72 +1.2 2,911,982 - AO353_13135 0.72 -2.7 2,911,982 - AO353_13135 0.72 +0.9 2,911,982 - AO353_13135 0.72 +0.8 2,911,982 - AO353_13135 0.72 +1.9 2,911,982 - AO353_13135 0.72 +0.3 2,911,982 - AO353_13135 0.72 +1.6 2,911,982 - AO353_13135 0.72 +0.9 2,911,982 - AO353_13135 0.72 -1.3 2,912,050 + AO353_13135 0.75 -1.7 2,912,050 + AO353_13135 0.75 +0.3 2,912,050 + AO353_13135 0.75 -3.0 2,912,050 + AO353_13135 0.75 +0.3 2,912,050 + AO353_13135 0.75 -2.3 2,912,050 + AO353_13135 0.75 +2.7 2,912,050 + AO353_13135 0.75 +0.0 2,912,050 + AO353_13135 0.75 -1.3 2,912,050 + AO353_13135 0.75 -1.3 2,912,050 + AO353_13135 0.75 +1.3 2,912,051 - AO353_13135 0.75 -0.7 2,912,051 - AO353_13135 0.75 -0.7 2,912,051 - AO353_13135 0.75 -1.3 2,912,051 - AO353_13135 0.75 +2.6 2,912,051 - AO353_13135 0.75 -0.7 2,912,279 + AO353_13135 0.87 +1.1 2,912,279 + AO353_13135 0.87 +1.0 2,912,279 + AO353_13135 0.87 -0.2 2,912,279 + AO353_13135 0.87 +0.5 2,912,280 - AO353_13135 0.87 -1.7 2,912,280 - AO353_13135 0.87 +2.6 2,912,280 - AO353_13135 0.87 -0.1 2,912,367 + -1.3 2,912,545 + +4.0 2,912,807 + AO353_13140 0.29 +1.2 2,912,838 + AO353_13140 0.32 -1.5 2,912,839 - AO353_13140 0.33 -2.0 2,912,841 + AO353_13140 0.33 +0.3 2,912,842 - AO353_13140 0.33 -0.7 2,912,842 - AO353_13140 0.33 +1.7 2,912,842 - AO353_13140 0.33 -1.7 2,912,842 - AO353_13140 0.33 +0.6 2,912,842 - AO353_13140 0.33 -1.7 2,912,842 - AO353_13140 0.33 -1.3 2,913,050 + AO353_13140 0.54 +3.0 2,913,125 + AO353_13140 0.62 +1.1 2,913,125 + AO353_13140 0.62 +0.5 2,913,126 - AO353_13140 0.62 -2.0 2,913,126 - AO353_13140 0.62 -1.7 2,913,126 - AO353_13140 0.62 +1.1 2,913,180 - AO353_13140 0.68 +1.3 2,913,183 - AO353_13140 0.68 -2.3 2,913,242 + AO353_13140 0.74 +2.0 2,913,242 + AO353_13140 0.74 +1.0 2,913,242 + AO353_13140 0.74 +1.5 2,913,277 + AO353_13140 0.78 +4.0 2,913,278 - AO353_13140 0.78 -2.3 2,913,286 + AO353_13140 0.78 +3.1 2,913,286 + AO353_13140 0.78 +0.3 2,913,287 - AO353_13140 0.79 +0.3 2,913,415 + +3.0 2,913,465 + +2.0 2,913,513 + +2.6
Or see this region's nucleotide sequence