Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_06385 and AO353_06390 are separated by 5 nucleotides AO353_06390 and AO353_06395 are separated by 8 nucleotides AO353_06395 and AO353_06400 are separated by 54 nucleotides AO353_06400 and AO353_06405 are separated by 136 nucleotides
AO353_06385: AO353_06385 - rRNA maturation factor, at 1,424,066 to 1,424,560
_06385
AO353_06390: AO353_06390 - magnesium transporter, at 1,424,566 to 1,425,405
_06390
AO353_06395: AO353_06395 - acyltransferase, at 1,425,414 to 1,426,937
_06395
AO353_06400: AO353_06400 - hypothetical protein, at 1,426,992 to 1,427,753
_06400
AO353_06405: AO353_06405 - hypothetical protein, at 1,427,890 to 1,428,213
_06405
Position (kb)
1425
1426
1427 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1424.539 kb on + strand at 1424.539 kb on + strand at 1424.558 kb on + strand at 1424.565 kb on + strand at 1424.753 kb on + strand, within AO353_06390 at 1424.753 kb on + strand, within AO353_06390 at 1424.753 kb on + strand, within AO353_06390 at 1425.157 kb on + strand, within AO353_06390 at 1425.157 kb on + strand, within AO353_06390 at 1425.157 kb on + strand, within AO353_06390 at 1425.157 kb on + strand, within AO353_06390 at 1425.157 kb on + strand, within AO353_06390 at 1425.157 kb on + strand, within AO353_06390 at 1425.157 kb on + strand, within AO353_06390 at 1425.157 kb on + strand, within AO353_06390 at 1425.157 kb on + strand, within AO353_06390 at 1425.157 kb on + strand, within AO353_06390 at 1425.157 kb on + strand, within AO353_06390 at 1425.157 kb on + strand, within AO353_06390 at 1425.157 kb on + strand, within AO353_06390 at 1425.157 kb on + strand, within AO353_06390 at 1425.157 kb on + strand, within AO353_06390 at 1425.157 kb on + strand, within AO353_06390 at 1425.393 kb on + strand at 1425.393 kb on + strand at 1426.885 kb on + strand at 1426.885 kb on + strand at 1426.991 kb on - strand at 1427.012 kb on - strand at 1427.113 kb on - strand, within AO353_06400 at 1427.113 kb on - strand, within AO353_06400 at 1427.142 kb on - strand, within AO353_06400 at 1427.180 kb on + strand, within AO353_06400 at 1427.180 kb on + strand, within AO353_06400 at 1427.180 kb on + strand, within AO353_06400 at 1427.180 kb on + strand, within AO353_06400 at 1427.180 kb on + strand, within AO353_06400 at 1427.181 kb on - strand, within AO353_06400 at 1427.181 kb on - strand, within AO353_06400 at 1427.181 kb on - strand, within AO353_06400 at 1427.181 kb on - strand, within AO353_06400 at 1427.181 kb on - strand, within AO353_06400 at 1427.181 kb on - strand, within AO353_06400 at 1427.181 kb on - strand, within AO353_06400 at 1427.181 kb on - strand, within AO353_06400 at 1427.420 kb on - strand, within AO353_06400 at 1427.732 kb on + strand at 1427.741 kb on - strand at 1427.741 kb on - strand at 1427.781 kb on + strand at 1427.781 kb on + strand at 1427.781 kb on + strand at 1427.781 kb on + strand at 1427.781 kb on + strand at 1427.781 kb on + strand at 1427.782 kb on - strand at 1427.782 kb on - strand at 1427.807 kb on + strand at 1427.807 kb on + strand at 1427.807 kb on + strand at 1427.807 kb on + strand at 1427.807 kb on + strand at 1427.807 kb on + strand at 1427.807 kb on + strand at 1427.807 kb on + strand at 1427.807 kb on + strand at 1427.807 kb on + strand at 1427.807 kb on + strand at 1427.807 kb on + strand at 1427.807 kb on + strand at 1427.807 kb on + strand at 1427.807 kb on + strand at 1427.807 kb on + strand at 1427.807 kb on + strand at 1427.807 kb on + strand at 1427.808 kb on - strand at 1427.808 kb on - strand at 1427.808 kb on - strand at 1427.808 kb on - strand at 1427.808 kb on - strand at 1427.808 kb on - strand at 1427.808 kb on - strand at 1427.808 kb on - strand at 1427.808 kb on - strand at 1427.808 kb on - strand at 1427.891 kb on + strand at 1427.891 kb on + strand at 1427.891 kb on + strand at 1427.891 kb on + strand at 1427.892 kb on - strand at 1427.892 kb on - strand at 1427.892 kb on - strand at 1427.892 kb on - strand at 1427.892 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 1,424,539 + -1.8 1,424,539 + -1.8 1,424,558 + -2.1 1,424,565 + -2.6 1,424,753 + AO353_06390 0.22 +1.5 1,424,753 + AO353_06390 0.22 +3.4 1,424,753 + AO353_06390 0.22 +3.0 1,425,157 + AO353_06390 0.70 -1.4 1,425,157 + AO353_06390 0.70 +3.8 1,425,157 + AO353_06390 0.70 +2.8 1,425,157 + AO353_06390 0.70 +3.3 1,425,157 + AO353_06390 0.70 +4.0 1,425,157 + AO353_06390 0.70 +2.5 1,425,157 + AO353_06390 0.70 +1.2 1,425,157 + AO353_06390 0.70 +0.9 1,425,157 + AO353_06390 0.70 -0.8 1,425,157 + AO353_06390 0.70 +2.8 1,425,157 + AO353_06390 0.70 -1.2 1,425,157 + AO353_06390 0.70 +3.2 1,425,157 + AO353_06390 0.70 +2.9 1,425,157 + AO353_06390 0.70 +2.2 1,425,157 + AO353_06390 0.70 +3.9 1,425,157 + AO353_06390 0.70 +1.9 1,425,393 + -0.8 1,425,393 + +0.5 1,426,885 + -0.5 1,426,885 + +3.4 1,426,991 - +2.2 1,427,012 - -0.8 1,427,113 - AO353_06400 0.16 +0.2 1,427,113 - AO353_06400 0.16 +0.2 1,427,142 - AO353_06400 0.20 +1.5 1,427,180 + AO353_06400 0.25 +1.2 1,427,180 + AO353_06400 0.25 -0.8 1,427,180 + AO353_06400 0.25 +2.9 1,427,180 + AO353_06400 0.25 -0.8 1,427,180 + AO353_06400 0.25 +1.8 1,427,181 - AO353_06400 0.25 +1.8 1,427,181 - AO353_06400 0.25 -1.4 1,427,181 - AO353_06400 0.25 +1.6 1,427,181 - AO353_06400 0.25 -2.8 1,427,181 - AO353_06400 0.25 -2.6 1,427,181 - AO353_06400 0.25 -0.8 1,427,181 - AO353_06400 0.25 +0.7 1,427,181 - AO353_06400 0.25 +0.2 1,427,420 - AO353_06400 0.56 +2.7 1,427,732 + +1.2 1,427,741 - +1.4 1,427,741 - +0.6 1,427,781 + -0.8 1,427,781 + -3.7 1,427,781 + +0.5 1,427,781 + -0.4 1,427,781 + -0.1 1,427,781 + +1.2 1,427,782 - -1.8 1,427,782 - -0.6 1,427,807 + +2.0 1,427,807 + +1.5 1,427,807 + -0.2 1,427,807 + +1.9 1,427,807 + -1.4 1,427,807 + +1.2 1,427,807 + -1.8 1,427,807 + +0.2 1,427,807 + +1.5 1,427,807 + +2.3 1,427,807 + +0.1 1,427,807 + -1.8 1,427,807 + -2.8 1,427,807 + -0.8 1,427,807 + +4.5 1,427,807 + -0.3 1,427,807 + +1.7 1,427,807 + +3.2 1,427,808 - +0.2 1,427,808 - +0.2 1,427,808 - +0.2 1,427,808 - +1.8 1,427,808 - -1.8 1,427,808 - -0.7 1,427,808 - +0.2 1,427,808 - -1.8 1,427,808 - -0.8 1,427,808 - -2.3 1,427,891 + +1.7 1,427,891 + +1.8 1,427,891 + +1.2 1,427,891 + -0.5 1,427,892 - +0.9 1,427,892 - -0.8 1,427,892 - -1.4 1,427,892 - +0.2 1,427,892 - -0.6
Or see this region's nucleotide sequence