Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_04285 and AO353_04290 are separated by 176 nucleotides AO353_04290 and AO353_04295 are separated by 260 nucleotides
AO353_04285: AO353_04285 - spermidine/putrescine ABC transporter permease, at 922,187 to 923,029
_04285
AO353_04290: AO353_04290 - 1-pyrroline dehydrogenase, at 923,206 to 924,630
_04290
AO353_04295: AO353_04295 - amino acid permease, at 924,891 to 926,378
_04295
Position (kb) 923
924
925 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 922.664 kb on + strand, within AO353_04285 at 922.664 kb on + strand, within AO353_04285 at 922.665 kb on - strand, within AO353_04285 at 922.665 kb on - strand, within AO353_04285 at 922.665 kb on - strand, within AO353_04285 at 922.694 kb on - strand, within AO353_04285 at 922.694 kb on - strand, within AO353_04285 at 922.700 kb on + strand, within AO353_04285 at 922.700 kb on + strand, within AO353_04285 at 922.701 kb on - strand, within AO353_04285 at 922.758 kb on - strand, within AO353_04285 at 922.758 kb on - strand, within AO353_04285 at 922.979 kb on + strand at 922.979 kb on + strand at 922.979 kb on + strand at 922.980 kb on - strand at 922.980 kb on - strand at 922.982 kb on + strand at 922.982 kb on + strand at 922.982 kb on + strand at 922.983 kb on - strand at 922.983 kb on - strand at 922.983 kb on - strand at 923.024 kb on - strand at 923.027 kb on + strand at 923.027 kb on + strand at 923.027 kb on + strand at 923.027 kb on + strand at 923.027 kb on + strand at 923.028 kb on - strand at 923.028 kb on - strand at 923.028 kb on - strand at 923.028 kb on - strand at 923.028 kb on - strand at 923.041 kb on + strand at 923.041 kb on + strand at 923.042 kb on - strand at 923.122 kb on + strand at 923.122 kb on + strand at 923.122 kb on + strand at 923.123 kb on - strand at 923.123 kb on - strand at 923.123 kb on - strand at 923.205 kb on + strand at 923.205 kb on + strand at 923.206 kb on - strand at 923.267 kb on + strand at 923.292 kb on - strand at 923.297 kb on + strand at 923.297 kb on + strand at 923.482 kb on + strand, within AO353_04290 at 923.483 kb on - strand, within AO353_04290 at 923.483 kb on - strand, within AO353_04290 at 923.525 kb on + strand, within AO353_04290 at 923.525 kb on + strand, within AO353_04290 at 923.525 kb on + strand, within AO353_04290 at 923.525 kb on + strand, within AO353_04290 at 923.525 kb on + strand, within AO353_04290 at 923.525 kb on + strand, within AO353_04290 at 923.525 kb on + strand, within AO353_04290 at 923.525 kb on + strand, within AO353_04290 at 923.525 kb on + strand, within AO353_04290 at 923.526 kb on - strand, within AO353_04290 at 923.526 kb on - strand, within AO353_04290 at 923.526 kb on - strand, within AO353_04290 at 923.526 kb on - strand, within AO353_04290 at 923.581 kb on + strand, within AO353_04290 at 923.581 kb on + strand, within AO353_04290 at 923.581 kb on + strand, within AO353_04290 at 923.581 kb on + strand, within AO353_04290 at 923.581 kb on + strand, within AO353_04290 at 923.582 kb on - strand, within AO353_04290 at 923.653 kb on + strand, within AO353_04290 at 923.653 kb on + strand, within AO353_04290 at 923.654 kb on - strand, within AO353_04290 at 923.654 kb on - strand, within AO353_04290 at 923.654 kb on - strand, within AO353_04290 at 923.706 kb on + strand at 923.765 kb on + strand, within AO353_04290 at 923.765 kb on + strand, within AO353_04290 at 923.766 kb on - strand, within AO353_04290 at 923.792 kb on + strand, within AO353_04290 at 923.793 kb on - strand, within AO353_04290 at 923.820 kb on + strand, within AO353_04290 at 923.821 kb on - strand, within AO353_04290 at 924.006 kb on + strand, within AO353_04290 at 924.007 kb on - strand, within AO353_04290 at 924.007 kb on - strand, within AO353_04290 at 924.025 kb on + strand, within AO353_04290 at 924.026 kb on - strand, within AO353_04290 at 924.026 kb on - strand, within AO353_04290 at 924.026 kb on - strand, within AO353_04290 at 924.026 kb on - strand, within AO353_04290 at 924.064 kb on + strand, within AO353_04290 at 924.064 kb on + strand, within AO353_04290 at 924.065 kb on - strand, within AO353_04290 at 924.065 kb on - strand, within AO353_04290 at 924.082 kb on + strand, within AO353_04290 at 924.082 kb on + strand, within AO353_04290 at 924.083 kb on - strand, within AO353_04290 at 924.083 kb on - strand, within AO353_04290 at 924.083 kb on - strand, within AO353_04290 at 924.130 kb on + strand, within AO353_04290 at 924.130 kb on + strand, within AO353_04290 at 924.131 kb on - strand, within AO353_04290 at 924.131 kb on - strand, within AO353_04290 at 924.131 kb on - strand, within AO353_04290 at 924.131 kb on - strand, within AO353_04290 at 924.131 kb on - strand, within AO353_04290 at 924.485 kb on - strand, within AO353_04290 at 924.485 kb on - strand, within AO353_04290 at 924.504 kb on + strand at 924.560 kb on - strand at 924.580 kb on + strand at 924.580 kb on + strand at 924.580 kb on + strand at 924.580 kb on + strand at 924.580 kb on + strand at 924.580 kb on + strand at 924.580 kb on + strand at 924.581 kb on - strand at 924.581 kb on - strand at 924.595 kb on + strand at 924.595 kb on + strand at 924.595 kb on + strand at 924.595 kb on + strand at 924.595 kb on + strand at 924.595 kb on + strand at 924.596 kb on - strand at 924.596 kb on - strand at 924.596 kb on - strand at 924.596 kb on - strand at 924.596 kb on - strand at 924.596 kb on - strand at 924.596 kb on - strand at 924.596 kb on - strand at 924.629 kb on - strand at 924.642 kb on + strand at 924.642 kb on + strand at 924.642 kb on + strand at 924.642 kb on + strand at 924.643 kb on - strand at 924.643 kb on - strand at 924.643 kb on - strand at 924.643 kb on - strand at 924.643 kb on - strand at 924.643 kb on - strand at 924.643 kb on - strand at 924.643 kb on - strand at 924.728 kb on + strand at 924.728 kb on + strand at 924.728 kb on + strand at 924.728 kb on + strand at 924.728 kb on + strand at 924.729 kb on - strand at 924.729 kb on - strand at 924.729 kb on - strand at 924.729 kb on - strand at 924.729 kb on - strand at 924.729 kb on - strand at 924.788 kb on + strand at 924.788 kb on + strand at 924.789 kb on - strand at 924.806 kb on + strand at 924.807 kb on - strand at 924.807 kb on - strand at 924.807 kb on - strand at 924.901 kb on + strand at 924.901 kb on + strand at 924.901 kb on + strand at 924.901 kb on + strand at 924.901 kb on + strand at 924.902 kb on - strand at 924.946 kb on + strand at 924.946 kb on + strand at 924.946 kb on + strand at 924.946 kb on + strand at 924.947 kb on - strand at 924.960 kb on + strand at 924.960 kb on + strand at 924.961 kb on - strand at 924.991 kb on + strand at 925.020 kb on + strand at 925.020 kb on + strand at 925.021 kb on - strand at 925.021 kb on - strand at 925.021 kb on - strand at 925.021 kb on - strand at 925.021 kb on - strand at 925.021 kb on - strand at 925.021 kb on - strand at 925.021 kb on - strand at 925.037 kb on - strand at 925.044 kb on + strand, within AO353_04295 at 925.044 kb on + strand, within AO353_04295 at 925.044 kb on + strand, within AO353_04295 at 925.044 kb on + strand, within AO353_04295 at 925.044 kb on + strand, within AO353_04295 at 925.044 kb on + strand, within AO353_04295 at 925.045 kb on - strand, within AO353_04295 at 925.045 kb on - strand, within AO353_04295 at 925.045 kb on - strand, within AO353_04295 at 925.046 kb on + strand, within AO353_04295 at 925.046 kb on + strand, within AO353_04295 at 925.046 kb on + strand, within AO353_04295 at 925.046 kb on + strand, within AO353_04295 at 925.046 kb on + strand, within AO353_04295 at 925.047 kb on - strand, within AO353_04295 at 925.047 kb on - strand, within AO353_04295 at 925.098 kb on + strand, within AO353_04295 at 925.098 kb on + strand, within AO353_04295 at 925.098 kb on + strand, within AO353_04295 at 925.239 kb on + strand, within AO353_04295 at 925.239 kb on + strand, within AO353_04295 at 925.239 kb on + strand, within AO353_04295 at 925.239 kb on + strand, within AO353_04295 at 925.239 kb on + strand, within AO353_04295 at 925.239 kb on + strand, within AO353_04295 at 925.239 kb on + strand, within AO353_04295 at 925.240 kb on - strand, within AO353_04295 at 925.240 kb on - strand, within AO353_04295 at 925.240 kb on - strand, within AO353_04295 at 925.293 kb on + strand, within AO353_04295 at 925.464 kb on + strand, within AO353_04295 at 925.464 kb on + strand, within AO353_04295 at 925.464 kb on + strand, within AO353_04295 at 925.464 kb on + strand, within AO353_04295 at 925.465 kb on - strand, within AO353_04295 at 925.465 kb on - strand, within AO353_04295 at 925.465 kb on - strand, within AO353_04295 at 925.520 kb on + strand, within AO353_04295 at 925.539 kb on + strand, within AO353_04295 at 925.540 kb on - strand, within AO353_04295 at 925.540 kb on - strand, within AO353_04295 at 925.540 kb on - strand, within AO353_04295 at 925.540 kb on - strand, within AO353_04295 at 925.584 kb on + strand, within AO353_04295 at 925.584 kb on + strand, within AO353_04295 at 925.584 kb on + strand, within AO353_04295 at 925.584 kb on + strand, within AO353_04295 at 925.584 kb on + strand, within AO353_04295 at 925.584 kb on + strand, within AO353_04295 at 925.585 kb on - strand, within AO353_04295 at 925.585 kb on - strand, within AO353_04295 at 925.585 kb on - strand, within AO353_04295 at 925.588 kb on - strand, within AO353_04295
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 922,664 + AO353_04285 0.57 +1.4 922,664 + AO353_04285 0.57 -2.2 922,665 - AO353_04285 0.57 +0.1 922,665 - AO353_04285 0.57 +0.1 922,665 - AO353_04285 0.57 +0.4 922,694 - AO353_04285 0.60 +1.3 922,694 - AO353_04285 0.60 -0.9 922,700 + AO353_04285 0.61 -0.5 922,700 + AO353_04285 0.61 +1.3 922,701 - AO353_04285 0.61 -0.9 922,758 - AO353_04285 0.68 -1.5 922,758 - AO353_04285 0.68 +1.6 922,979 + +0.9 922,979 + +1.3 922,979 + +0.9 922,980 - +0.1 922,980 - +1.3 922,982 + -0.9 922,982 + -0.7 922,982 + +2.5 922,983 - -0.9 922,983 - -0.4 922,983 - +0.2 923,024 - +0.1 923,027 + +3.0 923,027 + -1.5 923,027 + +1.1 923,027 + +1.1 923,027 + +1.9 923,028 - +0.4 923,028 - -0.9 923,028 - -1.5 923,028 - -0.9 923,028 - +0.1 923,041 + -1.5 923,041 + +2.1 923,042 - +1.8 923,122 + -1.5 923,122 + -0.9 923,122 + -3.2 923,123 - -1.0 923,123 - -2.5 923,123 - -0.9 923,205 + -1.9 923,205 + -2.7 923,206 - +0.3 923,267 + +0.8 923,292 - -1.9 923,297 + +0.4 923,297 + +0.1 923,482 + AO353_04290 0.19 -1.2 923,483 - AO353_04290 0.19 -1.2 923,483 - AO353_04290 0.19 -1.5 923,525 + AO353_04290 0.22 -0.5 923,525 + AO353_04290 0.22 -0.8 923,525 + AO353_04290 0.22 -0.9 923,525 + AO353_04290 0.22 +0.1 923,525 + AO353_04290 0.22 -1.5 923,525 + AO353_04290 0.22 +1.2 923,525 + AO353_04290 0.22 -1.5 923,525 + AO353_04290 0.22 +1.0 923,525 + AO353_04290 0.22 -1.5 923,526 - AO353_04290 0.22 -0.2 923,526 - AO353_04290 0.22 +1.4 923,526 - AO353_04290 0.22 -2.2 923,526 - AO353_04290 0.22 +2.4 923,581 + AO353_04290 0.26 -1.9 923,581 + AO353_04290 0.26 -2.5 923,581 + AO353_04290 0.26 -1.7 923,581 + AO353_04290 0.26 -0.3 923,581 + AO353_04290 0.26 -1.5 923,582 - AO353_04290 0.26 -1.9 923,653 + AO353_04290 0.31 +1.1 923,653 + AO353_04290 0.31 +0.7 923,654 - AO353_04290 0.31 +1.9 923,654 - AO353_04290 0.31 +0.1 923,654 - AO353_04290 0.31 +0.7 923,706 + -0.9 923,765 + AO353_04290 0.39 -0.2 923,765 + AO353_04290 0.39 -1.9 923,766 - AO353_04290 0.39 +0.2 923,792 + AO353_04290 0.41 -1.9 923,793 - AO353_04290 0.41 -2.2 923,820 + AO353_04290 0.43 -0.9 923,821 - AO353_04290 0.43 +1.9 924,006 + AO353_04290 0.56 +1.6 924,007 - AO353_04290 0.56 +1.8 924,007 - AO353_04290 0.56 +2.0 924,025 + AO353_04290 0.57 -1.5 924,026 - AO353_04290 0.58 -0.9 924,026 - AO353_04290 0.58 +0.4 924,026 - AO353_04290 0.58 -0.9 924,026 - AO353_04290 0.58 -1.9 924,064 + AO353_04290 0.60 -0.9 924,064 + AO353_04290 0.60 -1.7 924,065 - AO353_04290 0.60 -0.9 924,065 - AO353_04290 0.60 +1.5 924,082 + AO353_04290 0.61 -1.9 924,082 + AO353_04290 0.61 +2.5 924,083 - AO353_04290 0.62 -0.6 924,083 - AO353_04290 0.62 +1.1 924,083 - AO353_04290 0.62 -0.9 924,130 + AO353_04290 0.65 -3.1 924,130 + AO353_04290 0.65 -1.9 924,131 - AO353_04290 0.65 +1.1 924,131 - AO353_04290 0.65 -1.5 924,131 - AO353_04290 0.65 -2.2 924,131 - AO353_04290 0.65 +0.8 924,131 - AO353_04290 0.65 +2.2 924,485 - AO353_04290 0.90 -3.2 924,485 - AO353_04290 0.90 -0.9 924,504 + -0.9 924,560 - -1.5 924,580 + -2.5 924,580 + -1.5 924,580 + -1.9 924,580 + +2.0 924,580 + -1.5 924,580 + -2.5 924,580 + +0.4 924,581 - -0.9 924,581 - +0.8 924,595 + +0.1 924,595 + -1.9 924,595 + -0.9 924,595 + +1.9 924,595 + -0.9 924,595 + +0.1 924,596 - -1.9 924,596 - -0.9 924,596 - -0.8 924,596 - -1.5 924,596 - -1.9 924,596 - -2.2 924,596 - +2.4 924,596 - +0.1 924,629 - -2.0 924,642 + +0.1 924,642 + +0.5 924,642 + +2.9 924,642 + +2.4 924,643 - +0.6 924,643 - -0.9 924,643 - -1.5 924,643 - -1.4 924,643 - +1.3 924,643 - +1.7 924,643 - +0.1 924,643 - -0.0 924,728 + -2.2 924,728 + -1.5 924,728 + -1.5 924,728 + +1.8 924,728 + -0.3 924,729 - -0.9 924,729 - +1.3 924,729 - -2.7 924,729 - +1.4 924,729 - -2.2 924,729 - +0.7 924,788 + -2.5 924,788 + -2.9 924,789 - +0.1 924,806 + +0.1 924,807 - -0.1 924,807 - +1.7 924,807 - +0.1 924,901 + +2.1 924,901 + +0.1 924,901 + +1.7 924,901 + -1.4 924,901 + -1.5 924,902 - -1.5 924,946 + -1.9 924,946 + +3.5 924,946 + +0.4 924,946 + -0.9 924,947 - +3.4 924,960 + +0.1 924,960 + -1.9 924,961 - -1.5 924,991 + -0.9 925,020 + -0.3 925,020 + +1.3 925,021 - -2.5 925,021 - -0.4 925,021 - +0.1 925,021 - -0.3 925,021 - -2.2 925,021 - +1.4 925,021 - +1.6 925,021 - +0.9 925,037 - +1.1 925,044 + AO353_04295 0.10 +0.1 925,044 + AO353_04295 0.10 -1.5 925,044 + AO353_04295 0.10 -0.0 925,044 + AO353_04295 0.10 +1.9 925,044 + AO353_04295 0.10 +0.1 925,044 + AO353_04295 0.10 -0.9 925,045 - AO353_04295 0.10 -0.5 925,045 - AO353_04295 0.10 +2.3 925,045 - AO353_04295 0.10 -1.5 925,046 + AO353_04295 0.10 +1.1 925,046 + AO353_04295 0.10 +2.5 925,046 + AO353_04295 0.10 +1.2 925,046 + AO353_04295 0.10 +0.3 925,046 + AO353_04295 0.10 -1.9 925,047 - AO353_04295 0.10 +0.9 925,047 - AO353_04295 0.10 +1.9 925,098 + AO353_04295 0.14 +0.7 925,098 + AO353_04295 0.14 +1.8 925,098 + AO353_04295 0.14 -0.9 925,239 + AO353_04295 0.23 -2.7 925,239 + AO353_04295 0.23 -1.7 925,239 + AO353_04295 0.23 +2.4 925,239 + AO353_04295 0.23 +0.9 925,239 + AO353_04295 0.23 +0.1 925,239 + AO353_04295 0.23 -2.5 925,239 + AO353_04295 0.23 +4.0 925,240 - AO353_04295 0.23 -1.3 925,240 - AO353_04295 0.23 -1.9 925,240 - AO353_04295 0.23 -1.9 925,293 + AO353_04295 0.27 -2.2 925,464 + AO353_04295 0.39 -2.2 925,464 + AO353_04295 0.39 +0.1 925,464 + AO353_04295 0.39 +2.0 925,464 + AO353_04295 0.39 +0.1 925,465 - AO353_04295 0.39 +0.7 925,465 - AO353_04295 0.39 +0.8 925,465 - AO353_04295 0.39 +1.1 925,520 + AO353_04295 0.42 +1.7 925,539 + AO353_04295 0.44 -0.9 925,540 - AO353_04295 0.44 -0.2 925,540 - AO353_04295 0.44 +0.1 925,540 - AO353_04295 0.44 -0.9 925,540 - AO353_04295 0.44 +0.7 925,584 + AO353_04295 0.47 +0.1 925,584 + AO353_04295 0.47 -1.5 925,584 + AO353_04295 0.47 -1.5 925,584 + AO353_04295 0.47 -1.5 925,584 + AO353_04295 0.47 -1.5 925,584 + AO353_04295 0.47 -2.9 925,585 - AO353_04295 0.47 -0.7 925,585 - AO353_04295 0.47 +2.3 925,585 - AO353_04295 0.47 +0.1 925,588 - AO353_04295 0.47 -0.4
Or see this region's nucleotide sequence