Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_04265 and AO353_04270 are separated by 87 nucleotides AO353_04270 and AO353_04275 are separated by 237 nucleotides
AO353_04265: AO353_04265 - 1-pyrroline dehydrogenase, at 917,274 to 918,734
_04265
AO353_04270: AO353_04270 - spermidine/putrescine ABC transporter substrate-binding protein, at 918,822 to 919,973
_04270
AO353_04275: AO353_04275 - polyamine ABC transporter ATP-binding protein, at 920,211 to 921,248
_04275
Position (kb) 918
919
920 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 917.891 kb on + strand, within AO353_04265 at 917.891 kb on + strand, within AO353_04265 at 917.892 kb on - strand, within AO353_04265 at 917.892 kb on - strand, within AO353_04265 at 917.892 kb on - strand, within AO353_04265 at 917.892 kb on - strand, within AO353_04265 at 917.892 kb on - strand, within AO353_04265 at 918.020 kb on + strand, within AO353_04265 at 918.020 kb on + strand, within AO353_04265 at 918.020 kb on + strand, within AO353_04265 at 918.021 kb on - strand, within AO353_04265 at 918.021 kb on - strand, within AO353_04265 at 918.021 kb on - strand, within AO353_04265 at 918.021 kb on - strand, within AO353_04265 at 918.021 kb on - strand, within AO353_04265 at 918.074 kb on + strand, within AO353_04265 at 918.105 kb on + strand, within AO353_04265 at 918.105 kb on + strand, within AO353_04265 at 918.105 kb on + strand, within AO353_04265 at 918.105 kb on + strand, within AO353_04265 at 918.105 kb on + strand, within AO353_04265 at 918.106 kb on - strand, within AO353_04265 at 918.106 kb on - strand, within AO353_04265 at 918.106 kb on - strand, within AO353_04265 at 918.106 kb on - strand at 918.106 kb on - strand, within AO353_04265 at 918.106 kb on - strand, within AO353_04265 at 918.106 kb on - strand, within AO353_04265 at 918.106 kb on - strand, within AO353_04265 at 918.106 kb on - strand, within AO353_04265 at 918.106 kb on - strand, within AO353_04265 at 918.106 kb on - strand, within AO353_04265 at 918.106 kb on - strand, within AO353_04265 at 918.111 kb on + strand, within AO353_04265 at 918.112 kb on - strand, within AO353_04265 at 918.112 kb on - strand, within AO353_04265 at 918.112 kb on - strand, within AO353_04265 at 918.114 kb on + strand, within AO353_04265 at 918.114 kb on + strand, within AO353_04265 at 918.114 kb on + strand, within AO353_04265 at 918.114 kb on + strand, within AO353_04265 at 918.114 kb on + strand, within AO353_04265 at 918.115 kb on - strand, within AO353_04265 at 918.115 kb on - strand, within AO353_04265 at 918.115 kb on - strand, within AO353_04265 at 918.115 kb on - strand, within AO353_04265 at 918.115 kb on - strand, within AO353_04265 at 918.115 kb on - strand, within AO353_04265 at 918.115 kb on - strand, within AO353_04265 at 918.115 kb on - strand, within AO353_04265 at 918.115 kb on - strand, within AO353_04265 at 918.115 kb on - strand, within AO353_04265 at 918.153 kb on + strand, within AO353_04265 at 918.153 kb on + strand, within AO353_04265 at 918.154 kb on - strand, within AO353_04265 at 918.154 kb on - strand, within AO353_04265 at 918.154 kb on - strand, within AO353_04265 at 918.154 kb on - strand, within AO353_04265 at 918.369 kb on + strand, within AO353_04265 at 918.369 kb on + strand, within AO353_04265 at 918.369 kb on + strand, within AO353_04265 at 918.370 kb on - strand, within AO353_04265 at 918.372 kb on + strand, within AO353_04265 at 918.373 kb on - strand, within AO353_04265 at 918.505 kb on - strand, within AO353_04265 at 918.661 kb on + strand at 918.661 kb on + strand at 918.661 kb on + strand at 918.661 kb on + strand at 918.662 kb on - strand at 918.662 kb on - strand at 918.662 kb on - strand at 918.684 kb on + strand at 918.684 kb on + strand at 918.684 kb on + strand at 918.685 kb on - strand at 918.685 kb on - strand at 918.685 kb on - strand at 918.685 kb on - strand at 918.732 kb on + strand at 918.733 kb on - strand at 918.733 kb on - strand at 918.741 kb on + strand at 918.799 kb on + strand at 918.800 kb on - strand at 918.800 kb on - strand at 918.803 kb on + strand at 918.803 kb on + strand at 918.803 kb on + strand at 918.803 kb on + strand at 918.803 kb on + strand at 918.803 kb on + strand at 918.803 kb on + strand at 918.803 kb on + strand at 918.803 kb on + strand at 918.804 kb on - strand at 918.804 kb on - strand at 918.804 kb on - strand at 918.804 kb on - strand at 918.865 kb on + strand at 918.957 kb on + strand, within AO353_04270 at 918.957 kb on + strand, within AO353_04270 at 918.958 kb on - strand, within AO353_04270 at 918.987 kb on + strand, within AO353_04270 at 918.988 kb on - strand, within AO353_04270 at 918.988 kb on - strand, within AO353_04270 at 918.988 kb on - strand, within AO353_04270 at 919.161 kb on - strand, within AO353_04270 at 919.161 kb on - strand, within AO353_04270 at 919.218 kb on + strand, within AO353_04270 at 919.218 kb on + strand, within AO353_04270 at 919.218 kb on + strand, within AO353_04270 at 919.218 kb on + strand, within AO353_04270 at 919.218 kb on + strand, within AO353_04270 at 919.218 kb on + strand, within AO353_04270 at 919.218 kb on + strand, within AO353_04270 at 919.218 kb on + strand, within AO353_04270 at 919.219 kb on - strand, within AO353_04270 at 919.219 kb on - strand, within AO353_04270 at 919.219 kb on - strand, within AO353_04270 at 919.219 kb on - strand, within AO353_04270 at 919.219 kb on - strand, within AO353_04270 at 919.219 kb on - strand, within AO353_04270 at 919.219 kb on - strand, within AO353_04270 at 919.239 kb on + strand, within AO353_04270 at 919.240 kb on - strand, within AO353_04270 at 919.251 kb on + strand, within AO353_04270 at 919.251 kb on + strand, within AO353_04270 at 919.252 kb on - strand, within AO353_04270 at 919.252 kb on - strand, within AO353_04270 at 919.278 kb on + strand, within AO353_04270 at 919.278 kb on + strand, within AO353_04270 at 919.278 kb on + strand, within AO353_04270 at 919.279 kb on - strand, within AO353_04270 at 919.279 kb on - strand, within AO353_04270 at 919.279 kb on - strand, within AO353_04270 at 919.279 kb on - strand, within AO353_04270 at 919.279 kb on - strand, within AO353_04270 at 919.307 kb on + strand, within AO353_04270 at 919.307 kb on + strand, within AO353_04270 at 919.307 kb on + strand, within AO353_04270 at 919.307 kb on + strand, within AO353_04270 at 919.307 kb on + strand, within AO353_04270 at 919.308 kb on - strand, within AO353_04270 at 919.308 kb on - strand, within AO353_04270 at 919.380 kb on + strand, within AO353_04270 at 919.380 kb on + strand, within AO353_04270 at 919.380 kb on + strand, within AO353_04270 at 919.380 kb on + strand, within AO353_04270 at 919.380 kb on + strand, within AO353_04270 at 919.381 kb on - strand, within AO353_04270 at 919.381 kb on - strand, within AO353_04270 at 919.381 kb on - strand, within AO353_04270 at 919.381 kb on - strand, within AO353_04270 at 919.381 kb on - strand, within AO353_04270 at 919.381 kb on - strand, within AO353_04270 at 919.381 kb on - strand, within AO353_04270 at 919.381 kb on - strand, within AO353_04270 at 919.395 kb on + strand, within AO353_04270 at 919.395 kb on + strand, within AO353_04270 at 919.395 kb on + strand, within AO353_04270 at 919.395 kb on + strand, within AO353_04270 at 919.395 kb on + strand, within AO353_04270 at 919.395 kb on + strand, within AO353_04270 at 919.395 kb on + strand, within AO353_04270 at 919.395 kb on + strand, within AO353_04270 at 919.396 kb on - strand, within AO353_04270 at 919.396 kb on - strand, within AO353_04270 at 919.396 kb on - strand, within AO353_04270 at 919.396 kb on - strand, within AO353_04270 at 919.396 kb on - strand, within AO353_04270 at 919.396 kb on - strand, within AO353_04270 at 919.416 kb on + strand, within AO353_04270 at 919.417 kb on - strand, within AO353_04270 at 919.417 kb on - strand, within AO353_04270 at 919.459 kb on - strand, within AO353_04270 at 919.479 kb on + strand, within AO353_04270 at 919.479 kb on + strand, within AO353_04270 at 919.479 kb on + strand, within AO353_04270 at 919.479 kb on + strand, within AO353_04270 at 919.479 kb on + strand, within AO353_04270 at 919.531 kb on - strand, within AO353_04270 at 919.602 kb on + strand, within AO353_04270 at 919.602 kb on + strand, within AO353_04270 at 919.602 kb on + strand, within AO353_04270 at 919.602 kb on + strand, within AO353_04270 at 919.602 kb on + strand, within AO353_04270 at 919.603 kb on - strand, within AO353_04270 at 919.603 kb on - strand, within AO353_04270 at 919.603 kb on - strand, within AO353_04270 at 919.603 kb on - strand, within AO353_04270 at 919.603 kb on - strand, within AO353_04270 at 919.603 kb on - strand, within AO353_04270 at 919.725 kb on + strand, within AO353_04270 at 919.725 kb on + strand, within AO353_04270 at 919.726 kb on - strand, within AO353_04270 at 919.726 kb on - strand, within AO353_04270 at 919.771 kb on + strand, within AO353_04270 at 919.772 kb on - strand, within AO353_04270 at 919.926 kb on + strand at 919.926 kb on + strand at 919.926 kb on + strand at 919.927 kb on - strand at 919.927 kb on - strand at 919.927 kb on - strand at 919.927 kb on - strand at 919.927 kb on - strand at 919.927 kb on - strand at 919.947 kb on + strand at 919.947 kb on + strand at 919.947 kb on + strand at 919.947 kb on + strand at 919.948 kb on - strand at 919.948 kb on - strand at 919.948 kb on - strand at 919.967 kb on + strand at 919.971 kb on + strand at 919.971 kb on + strand at 919.971 kb on + strand at 919.971 kb on + strand at 919.972 kb on - strand at 919.972 kb on - strand at 919.972 kb on - strand at 919.972 kb on - strand at 919.972 kb on - strand at 920.056 kb on + strand at 920.056 kb on + strand at 920.057 kb on - strand at 920.128 kb on + strand at 920.128 kb on + strand at 920.128 kb on + strand at 920.128 kb on + strand at 920.128 kb on + strand at 920.129 kb on - strand at 920.481 kb on - strand, within AO353_04275 at 920.481 kb on - strand, within AO353_04275 at 920.481 kb on - strand, within AO353_04275 at 920.505 kb on + strand, within AO353_04275 at 920.505 kb on + strand, within AO353_04275 at 920.506 kb on - strand, within AO353_04275 at 920.600 kb on + strand, within AO353_04275 at 920.600 kb on + strand, within AO353_04275 at 920.877 kb on + strand, within AO353_04275 at 920.877 kb on + strand, within AO353_04275 at 920.877 kb on + strand, within AO353_04275 at 920.878 kb on - strand, within AO353_04275 at 920.878 kb on - strand, within AO353_04275 at 920.878 kb on - strand, within AO353_04275 at 920.878 kb on - strand, within AO353_04275 at 920.878 kb on - strand, within AO353_04275 at 920.878 kb on - strand, within AO353_04275 at 920.878 kb on - strand, within AO353_04275
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 917,891 + AO353_04265 0.42 +2.7 917,891 + AO353_04265 0.42 -1.5 917,892 - AO353_04265 0.42 -1.1 917,892 - AO353_04265 0.42 +0.1 917,892 - AO353_04265 0.42 +0.1 917,892 - AO353_04265 0.42 +1.1 917,892 - AO353_04265 0.42 -0.9 918,020 + AO353_04265 0.51 +3.5 918,020 + AO353_04265 0.51 +4.7 918,020 + AO353_04265 0.51 -1.5 918,021 - AO353_04265 0.51 +0.1 918,021 - AO353_04265 0.51 +1.4 918,021 - AO353_04265 0.51 +2.1 918,021 - AO353_04265 0.51 -0.6 918,021 - AO353_04265 0.51 +1.7 918,074 + AO353_04265 0.55 -0.9 918,105 + AO353_04265 0.57 -1.1 918,105 + AO353_04265 0.57 -2.5 918,105 + AO353_04265 0.57 -1.9 918,105 + AO353_04265 0.57 -2.5 918,105 + AO353_04265 0.57 -1.5 918,106 - AO353_04265 0.57 -0.2 918,106 - AO353_04265 0.57 -1.5 918,106 - AO353_04265 0.57 -0.5 918,106 - +1.1 918,106 - AO353_04265 0.57 -2.9 918,106 - AO353_04265 0.57 -0.9 918,106 - AO353_04265 0.57 +0.5 918,106 - AO353_04265 0.57 +1.6 918,106 - AO353_04265 0.57 -0.2 918,106 - AO353_04265 0.57 +1.4 918,106 - AO353_04265 0.57 -0.7 918,106 - AO353_04265 0.57 +0.6 918,111 + AO353_04265 0.57 +1.1 918,112 - AO353_04265 0.57 -0.9 918,112 - AO353_04265 0.57 -0.2 918,112 - AO353_04265 0.57 +0.1 918,114 + AO353_04265 0.57 +0.1 918,114 + AO353_04265 0.57 +1.1 918,114 + AO353_04265 0.57 -2.2 918,114 + AO353_04265 0.57 +1.5 918,114 + AO353_04265 0.57 +0.7 918,115 - AO353_04265 0.58 +1.4 918,115 - AO353_04265 0.58 +0.6 918,115 - AO353_04265 0.58 +0.5 918,115 - AO353_04265 0.58 +1.4 918,115 - AO353_04265 0.58 -2.7 918,115 - AO353_04265 0.58 +1.4 918,115 - AO353_04265 0.58 -1.5 918,115 - AO353_04265 0.58 -0.1 918,115 - AO353_04265 0.58 +0.6 918,115 - AO353_04265 0.58 -2.5 918,153 + AO353_04265 0.60 +2.4 918,153 + AO353_04265 0.60 +0.7 918,154 - AO353_04265 0.60 +0.9 918,154 - AO353_04265 0.60 +1.1 918,154 - AO353_04265 0.60 +2.7 918,154 - AO353_04265 0.60 -0.9 918,369 + AO353_04265 0.75 +0.3 918,369 + AO353_04265 0.75 +2.3 918,369 + AO353_04265 0.75 -1.5 918,370 - AO353_04265 0.75 +1.7 918,372 + AO353_04265 0.75 +1.1 918,373 - AO353_04265 0.75 +0.1 918,505 - AO353_04265 0.84 -1.5 918,661 + -0.1 918,661 + -3.1 918,661 + +0.1 918,661 + -1.5 918,662 - +1.7 918,662 - -2.7 918,662 - -0.9 918,684 + -1.9 918,684 + +0.1 918,684 + +1.9 918,685 - -0.9 918,685 - +0.1 918,685 - -1.5 918,685 - +0.7 918,732 + +1.1 918,733 - +0.7 918,733 - +1.1 918,741 + +1.7 918,799 + -0.9 918,800 - -1.5 918,800 - +1.1 918,803 + -0.2 918,803 + +0.4 918,803 + +2.3 918,803 + -0.9 918,803 + +0.1 918,803 + -0.9 918,803 + +0.1 918,803 + +1.1 918,803 + -1.5 918,804 - +2.1 918,804 - -0.2 918,804 - +3.5 918,804 - -0.9 918,865 + +0.1 918,957 + AO353_04270 0.12 +0.1 918,957 + AO353_04270 0.12 +2.4 918,958 - AO353_04270 0.12 +1.1 918,987 + AO353_04270 0.14 +0.3 918,988 - AO353_04270 0.14 +2.3 918,988 - AO353_04270 0.14 +1.1 918,988 - AO353_04270 0.14 -1.5 919,161 - AO353_04270 0.29 -0.9 919,161 - AO353_04270 0.29 -0.9 919,218 + AO353_04270 0.34 -1.9 919,218 + AO353_04270 0.34 -0.9 919,218 + AO353_04270 0.34 -0.9 919,218 + AO353_04270 0.34 +0.1 919,218 + AO353_04270 0.34 +2.1 919,218 + AO353_04270 0.34 +0.6 919,218 + AO353_04270 0.34 +0.1 919,218 + AO353_04270 0.34 -2.5 919,219 - AO353_04270 0.34 -0.9 919,219 - AO353_04270 0.34 +0.9 919,219 - AO353_04270 0.34 +2.1 919,219 - AO353_04270 0.34 +0.1 919,219 - AO353_04270 0.34 +1.7 919,219 - AO353_04270 0.34 +1.1 919,219 - AO353_04270 0.34 +1.6 919,239 + AO353_04270 0.36 +1.4 919,240 - AO353_04270 0.36 -0.4 919,251 + AO353_04270 0.37 +2.0 919,251 + AO353_04270 0.37 +0.3 919,252 - AO353_04270 0.37 -0.3 919,252 - AO353_04270 0.37 +1.2 919,278 + AO353_04270 0.40 -0.9 919,278 + AO353_04270 0.40 -1.5 919,278 + AO353_04270 0.40 -1.5 919,279 - AO353_04270 0.40 -1.9 919,279 - AO353_04270 0.40 -2.2 919,279 - AO353_04270 0.40 +1.3 919,279 - AO353_04270 0.40 +1.1 919,279 - AO353_04270 0.40 -2.7 919,307 + AO353_04270 0.42 -0.3 919,307 + AO353_04270 0.42 -0.5 919,307 + AO353_04270 0.42 -2.2 919,307 + AO353_04270 0.42 +1.4 919,307 + AO353_04270 0.42 +1.2 919,308 - AO353_04270 0.42 -1.5 919,308 - AO353_04270 0.42 -2.2 919,380 + AO353_04270 0.48 +1.4 919,380 + AO353_04270 0.48 -0.3 919,380 + AO353_04270 0.48 +1.4 919,380 + AO353_04270 0.48 -1.9 919,380 + AO353_04270 0.48 +0.8 919,381 - AO353_04270 0.49 +0.8 919,381 - AO353_04270 0.49 +2.1 919,381 - AO353_04270 0.49 +0.5 919,381 - AO353_04270 0.49 -1.5 919,381 - AO353_04270 0.49 -0.9 919,381 - AO353_04270 0.49 -0.9 919,381 - AO353_04270 0.49 -1.5 919,381 - AO353_04270 0.49 +0.1 919,395 + AO353_04270 0.50 -1.9 919,395 + AO353_04270 0.50 -1.1 919,395 + AO353_04270 0.50 +1.1 919,395 + AO353_04270 0.50 -0.9 919,395 + AO353_04270 0.50 +1.5 919,395 + AO353_04270 0.50 -0.9 919,395 + AO353_04270 0.50 +1.9 919,395 + AO353_04270 0.50 -1.5 919,396 - AO353_04270 0.50 -0.9 919,396 - AO353_04270 0.50 +0.7 919,396 - AO353_04270 0.50 +1.1 919,396 - AO353_04270 0.50 +2.4 919,396 - AO353_04270 0.50 +0.9 919,396 - AO353_04270 0.50 +1.5 919,416 + AO353_04270 0.52 +2.5 919,417 - AO353_04270 0.52 +0.7 919,417 - AO353_04270 0.52 -0.9 919,459 - AO353_04270 0.55 -1.9 919,479 + AO353_04270 0.57 -0.9 919,479 + AO353_04270 0.57 -1.9 919,479 + AO353_04270 0.57 +3.1 919,479 + AO353_04270 0.57 +0.1 919,479 + AO353_04270 0.57 +0.1 919,531 - AO353_04270 0.62 -1.2 919,602 + AO353_04270 0.68 +2.3 919,602 + AO353_04270 0.68 +1.0 919,602 + AO353_04270 0.68 -1.5 919,602 + AO353_04270 0.68 +2.1 919,602 + AO353_04270 0.68 +1.8 919,603 - AO353_04270 0.68 +1.8 919,603 - AO353_04270 0.68 +0.1 919,603 - AO353_04270 0.68 -2.2 919,603 - AO353_04270 0.68 -1.5 919,603 - AO353_04270 0.68 +0.1 919,603 - AO353_04270 0.68 -0.3 919,725 + AO353_04270 0.78 -2.6 919,725 + AO353_04270 0.78 +1.4 919,726 - AO353_04270 0.78 +2.5 919,726 - AO353_04270 0.78 -1.9 919,771 + AO353_04270 0.82 -0.2 919,772 - AO353_04270 0.82 +1.7 919,926 + +0.1 919,926 + -0.9 919,926 + -1.6 919,927 - -0.9 919,927 - +0.7 919,927 - -1.5 919,927 - -1.5 919,927 - +0.5 919,927 - -2.2 919,947 + +1.1 919,947 + -1.2 919,947 + -2.5 919,947 + -1.5 919,948 - -1.5 919,948 - +1.5 919,948 - -2.9 919,967 + -0.3 919,971 + -1.2 919,971 + -1.7 919,971 + +0.8 919,971 + +1.3 919,972 - +1.4 919,972 - +0.1 919,972 - +0.1 919,972 - -0.9 919,972 - -1.9 920,056 + +2.7 920,056 + +0.1 920,057 - -1.5 920,128 + +0.1 920,128 + -1.5 920,128 + +1.0 920,128 + +2.5 920,128 + -0.5 920,129 - +1.1 920,481 - AO353_04275 0.26 +1.3 920,481 - AO353_04275 0.26 +1.8 920,481 - AO353_04275 0.26 +0.3 920,505 + AO353_04275 0.28 -0.2 920,505 + AO353_04275 0.28 +0.1 920,506 - AO353_04275 0.28 +1.4 920,600 + AO353_04275 0.37 +1.2 920,600 + AO353_04275 0.37 +0.1 920,877 + AO353_04275 0.64 +0.4 920,877 + AO353_04275 0.64 -2.7 920,877 + AO353_04275 0.64 +0.5 920,878 - AO353_04275 0.64 +1.4 920,878 - AO353_04275 0.64 +2.1 920,878 - AO353_04275 0.64 +2.1 920,878 - AO353_04275 0.64 +1.9 920,878 - AO353_04275 0.64 -2.2 920,878 - AO353_04275 0.64 +0.1 920,878 - AO353_04275 0.64 +1.7
Or see this region's nucleotide sequence