Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03915 and AO353_03920 are separated by 96 nucleotides AO353_03920 and AO353_03925 are separated by 5 nucleotides AO353_03925 and AO353_03930 are separated by 174 nucleotides AO353_03930 and AO353_03935 are separated by 58 nucleotides
AO353_03915: AO353_03915 - LysR family transcriptional regulator, at 837,965 to 838,858
_03915
AO353_03920: AO353_03920 - acetyltransferase, at 838,955 to 839,356
_03920
AO353_03925: AO353_03925 - lysine transporter LysE, at 839,362 to 839,964
_03925
AO353_03930: AO353_03930 - superoxide dismutase, at 840,139 to 840,735
_03930
AO353_03935: AO353_03935 - fructose-bisphosphate aldolase, at 840,794 to 841,087
_03935
Position (kb) 839
840 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 838.499 kb on + strand, within AO353_03915 at 838.499 kb on + strand, within AO353_03915 at 838.499 kb on + strand, within AO353_03915 at 838.499 kb on + strand, within AO353_03915 at 838.499 kb on + strand, within AO353_03915 at 838.499 kb on + strand, within AO353_03915 at 838.499 kb on + strand, within AO353_03915 at 838.499 kb on + strand, within AO353_03915 at 838.499 kb on + strand, within AO353_03915 at 838.500 kb on - strand, within AO353_03915 at 838.500 kb on - strand, within AO353_03915 at 838.500 kb on - strand, within AO353_03915 at 838.500 kb on - strand, within AO353_03915 at 838.500 kb on - strand, within AO353_03915 at 838.500 kb on - strand, within AO353_03915 at 838.500 kb on - strand, within AO353_03915 at 838.500 kb on - strand, within AO353_03915 at 838.500 kb on - strand at 838.500 kb on - strand, within AO353_03915 at 838.500 kb on - strand, within AO353_03915 at 838.500 kb on - strand, within AO353_03915 at 838.500 kb on - strand, within AO353_03915 at 838.500 kb on - strand, within AO353_03915 at 838.500 kb on - strand, within AO353_03915 at 838.500 kb on - strand, within AO353_03915 at 838.500 kb on - strand, within AO353_03915 at 838.846 kb on + strand at 838.846 kb on + strand at 838.847 kb on - strand at 839.021 kb on + strand, within AO353_03920 at 839.022 kb on - strand, within AO353_03920 at 839.022 kb on - strand, within AO353_03920 at 839.022 kb on - strand, within AO353_03920 at 839.033 kb on - strand, within AO353_03920 at 839.153 kb on + strand, within AO353_03920 at 839.153 kb on + strand, within AO353_03920 at 839.153 kb on + strand, within AO353_03920 at 839.154 kb on - strand, within AO353_03920 at 839.154 kb on - strand, within AO353_03920 at 839.273 kb on + strand, within AO353_03920 at 839.274 kb on - strand, within AO353_03920 at 839.355 kb on - strand at 839.355 kb on - strand at 839.355 kb on - strand at 839.355 kb on - strand at 839.355 kb on - strand at 839.361 kb on + strand at 839.361 kb on + strand at 839.361 kb on + strand at 839.361 kb on + strand at 839.362 kb on - strand at 839.362 kb on - strand at 839.362 kb on - strand at 839.362 kb on - strand at 839.362 kb on - strand at 839.362 kb on - strand at 839.362 kb on - strand at 839.362 kb on - strand at 839.362 kb on - strand at 839.374 kb on + strand at 839.375 kb on - strand at 839.375 kb on - strand at 839.375 kb on - strand at 839.375 kb on - strand at 839.375 kb on - strand at 839.737 kb on + strand, within AO353_03925 at 839.737 kb on + strand, within AO353_03925 at 839.737 kb on + strand, within AO353_03925 at 839.737 kb on + strand, within AO353_03925 at 839.738 kb on - strand, within AO353_03925 at 839.738 kb on - strand, within AO353_03925 at 839.738 kb on - strand, within AO353_03925 at 839.738 kb on - strand, within AO353_03925 at 839.738 kb on - strand, within AO353_03925 at 839.738 kb on - strand, within AO353_03925 at 839.797 kb on + strand, within AO353_03925 at 839.797 kb on + strand, within AO353_03925 at 839.797 kb on + strand, within AO353_03925 at 839.797 kb on + strand, within AO353_03925 at 839.797 kb on + strand, within AO353_03925 at 839.798 kb on - strand, within AO353_03925 at 839.798 kb on - strand, within AO353_03925 at 839.798 kb on - strand, within AO353_03925 at 839.798 kb on - strand, within AO353_03925 at 839.798 kb on - strand, within AO353_03925 at 839.798 kb on - strand, within AO353_03925 at 839.798 kb on - strand, within AO353_03925 at 839.798 kb on - strand, within AO353_03925 at 839.801 kb on + strand, within AO353_03925 at 839.801 kb on + strand, within AO353_03925 at 839.801 kb on + strand, within AO353_03925 at 839.801 kb on + strand, within AO353_03925 at 839.801 kb on + strand, within AO353_03925 at 839.802 kb on - strand, within AO353_03925 at 839.802 kb on - strand, within AO353_03925 at 839.802 kb on - strand, within AO353_03925 at 839.966 kb on + strand at 839.966 kb on + strand at 839.970 kb on - strand at 839.970 kb on - strand at 839.970 kb on - strand at 839.970 kb on - strand at 839.970 kb on - strand at 839.990 kb on + strand at 839.990 kb on + strand at 839.991 kb on - strand at 839.991 kb on - strand at 840.015 kb on - strand at 840.033 kb on + strand at 840.033 kb on + strand at 840.033 kb on + strand at 840.033 kb on + strand at 840.034 kb on - strand at 840.034 kb on - strand at 840.034 kb on - strand at 840.061 kb on + strand at 840.733 kb on + strand at 840.733 kb on + strand at 840.733 kb on + strand at 840.733 kb on + strand at 840.734 kb on - strand at 840.734 kb on - strand at 840.734 kb on - strand at 840.778 kb on + strand at 840.909 kb on + strand, within AO353_03935 at 840.945 kb on + strand, within AO353_03935 at 840.945 kb on + strand, within AO353_03935 at 840.945 kb on + strand, within AO353_03935 at 840.945 kb on + strand, within AO353_03935 at 840.945 kb on + strand at 840.945 kb on + strand, within AO353_03935 at 840.946 kb on - strand, within AO353_03935 at 840.946 kb on - strand, within AO353_03935 at 840.946 kb on - strand, within AO353_03935 at 840.962 kb on - strand, within AO353_03935
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 838,499 + AO353_03915 0.60 +0.0 838,499 + AO353_03915 0.60 -2.3 838,499 + AO353_03915 0.60 +3.7 838,499 + AO353_03915 0.60 -1.6 838,499 + AO353_03915 0.60 -1.6 838,499 + AO353_03915 0.60 +1.0 838,499 + AO353_03915 0.60 -2.9 838,499 + AO353_03915 0.60 -0.6 838,499 + AO353_03915 0.60 -0.4 838,500 - AO353_03915 0.60 +2.8 838,500 - AO353_03915 0.60 +1.4 838,500 - AO353_03915 0.60 +0.0 838,500 - AO353_03915 0.60 -1.0 838,500 - AO353_03915 0.60 +0.0 838,500 - AO353_03915 0.60 +0.7 838,500 - AO353_03915 0.60 -0.6 838,500 - AO353_03915 0.60 -1.6 838,500 - +0.0 838,500 - AO353_03915 0.60 +0.8 838,500 - AO353_03915 0.60 -1.0 838,500 - AO353_03915 0.60 -1.0 838,500 - AO353_03915 0.60 -1.6 838,500 - AO353_03915 0.60 +1.7 838,500 - AO353_03915 0.60 -3.2 838,500 - AO353_03915 0.60 +0.4 838,500 - AO353_03915 0.60 +2.2 838,846 + -1.6 838,846 + +0.0 838,847 - +1.6 839,021 + AO353_03920 0.16 +0.6 839,022 - AO353_03920 0.17 -1.0 839,022 - AO353_03920 0.17 +3.2 839,022 - AO353_03920 0.17 +1.3 839,033 - AO353_03920 0.19 +0.6 839,153 + AO353_03920 0.49 -2.3 839,153 + AO353_03920 0.49 +2.0 839,153 + AO353_03920 0.49 -1.6 839,154 - AO353_03920 0.50 +0.4 839,154 - AO353_03920 0.50 -1.6 839,273 + AO353_03920 0.79 +0.0 839,274 - AO353_03920 0.79 -0.1 839,355 - +0.0 839,355 - -1.0 839,355 - -0.5 839,355 - +1.4 839,355 - -2.3 839,361 + -1.3 839,361 + +0.0 839,361 + +0.7 839,361 + +0.3 839,362 - +0.0 839,362 - +0.0 839,362 - -1.2 839,362 - -1.0 839,362 - +0.0 839,362 - +0.0 839,362 - +1.2 839,362 - +0.8 839,362 - +1.0 839,374 + -2.8 839,375 - -3.0 839,375 - -0.6 839,375 - -1.0 839,375 - +1.2 839,375 - -1.6 839,737 + AO353_03925 0.62 -3.0 839,737 + AO353_03925 0.62 +0.0 839,737 + AO353_03925 0.62 -1.0 839,737 + AO353_03925 0.62 -1.6 839,738 - AO353_03925 0.62 -1.0 839,738 - AO353_03925 0.62 +0.0 839,738 - AO353_03925 0.62 -1.6 839,738 - AO353_03925 0.62 +0.0 839,738 - AO353_03925 0.62 +0.0 839,738 - AO353_03925 0.62 -1.6 839,797 + AO353_03925 0.72 +0.2 839,797 + AO353_03925 0.72 +0.8 839,797 + AO353_03925 0.72 +0.0 839,797 + AO353_03925 0.72 +1.3 839,797 + AO353_03925 0.72 +2.0 839,798 - AO353_03925 0.72 -1.1 839,798 - AO353_03925 0.72 -2.6 839,798 - AO353_03925 0.72 -3.3 839,798 - AO353_03925 0.72 +0.2 839,798 - AO353_03925 0.72 -2.6 839,798 - AO353_03925 0.72 -2.0 839,798 - AO353_03925 0.72 -1.0 839,798 - AO353_03925 0.72 +0.0 839,801 + AO353_03925 0.73 +1.0 839,801 + AO353_03925 0.73 -2.0 839,801 + AO353_03925 0.73 -0.6 839,801 + AO353_03925 0.73 +0.8 839,801 + AO353_03925 0.73 -3.0 839,802 - AO353_03925 0.73 +1.3 839,802 - AO353_03925 0.73 +0.6 839,802 - AO353_03925 0.73 -2.8 839,966 + +4.1 839,966 + -1.6 839,970 - +1.5 839,970 - -2.3 839,970 - -1.0 839,970 - +2.4 839,970 - -1.6 839,990 + +1.2 839,990 + +4.1 839,991 - +1.5 839,991 - +0.7 840,015 - +1.4 840,033 + -1.0 840,033 + +3.8 840,033 + +1.3 840,033 + -2.4 840,034 - -1.6 840,034 - -1.3 840,034 - -2.0 840,061 + +2.5 840,733 + -1.0 840,733 + -1.0 840,733 + -2.1 840,733 + +0.4 840,734 - +2.2 840,734 - +2.8 840,734 - -1.0 840,778 + +1.0 840,909 + AO353_03935 0.39 -2.0 840,945 + AO353_03935 0.51 -1.6 840,945 + AO353_03935 0.51 +1.2 840,945 + AO353_03935 0.51 -2.0 840,945 + AO353_03935 0.51 -1.0 840,945 + -1.0 840,945 + AO353_03935 0.51 -1.1 840,946 - AO353_03935 0.52 +2.0 840,946 - AO353_03935 0.52 +2.3 840,946 - AO353_03935 0.52 -1.9 840,962 - AO353_03935 0.57 +1.8
Or see this region's nucleotide sequence