Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03850 and AO353_03855 are separated by 149 nucleotides AO353_03855 and AO353_03860 are separated by 216 nucleotides
AO353_03850: AO353_03850 - ABC transporter permease, at 822,304 to 823,212
_03850
AO353_03855: AO353_03855 - spermidine/putrescine ABC transporter substrate-binding protein, at 823,362 to 824,465
_03855
AO353_03860: AO353_03860 - aldehyde dehydrogenase, at 824,682 to 826,130
_03860
Position (kb) 823
824
825 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 822.516 kb on - strand, within AO353_03850 at 822.626 kb on + strand, within AO353_03850 at 822.626 kb on + strand, within AO353_03850 at 822.626 kb on + strand, within AO353_03850 at 822.627 kb on - strand, within AO353_03850 at 822.627 kb on - strand, within AO353_03850 at 822.627 kb on - strand, within AO353_03850 at 822.627 kb on - strand, within AO353_03850 at 822.627 kb on - strand, within AO353_03850 at 822.691 kb on + strand, within AO353_03850 at 822.691 kb on + strand, within AO353_03850 at 822.692 kb on - strand, within AO353_03850 at 822.706 kb on + strand, within AO353_03850 at 822.707 kb on - strand, within AO353_03850 at 822.707 kb on - strand, within AO353_03850 at 822.707 kb on - strand, within AO353_03850 at 822.707 kb on - strand, within AO353_03850 at 822.707 kb on - strand, within AO353_03850 at 822.722 kb on + strand, within AO353_03850 at 822.722 kb on + strand, within AO353_03850 at 822.722 kb on + strand, within AO353_03850 at 822.722 kb on + strand, within AO353_03850 at 822.722 kb on + strand, within AO353_03850 at 822.722 kb on + strand, within AO353_03850 at 822.722 kb on + strand, within AO353_03850 at 822.812 kb on + strand, within AO353_03850 at 822.812 kb on + strand, within AO353_03850 at 822.813 kb on - strand, within AO353_03850 at 822.905 kb on + strand, within AO353_03850 at 822.905 kb on + strand, within AO353_03850 at 822.905 kb on + strand, within AO353_03850 at 822.905 kb on + strand, within AO353_03850 at 822.906 kb on - strand, within AO353_03850 at 822.906 kb on - strand, within AO353_03850 at 822.906 kb on - strand, within AO353_03850 at 822.906 kb on - strand, within AO353_03850 at 822.929 kb on - strand, within AO353_03850 at 822.986 kb on + strand, within AO353_03850 at 822.986 kb on + strand, within AO353_03850 at 822.986 kb on + strand, within AO353_03850 at 822.986 kb on + strand, within AO353_03850 at 822.986 kb on + strand, within AO353_03850 at 822.986 kb on + strand, within AO353_03850 at 822.986 kb on + strand, within AO353_03850 at 822.986 kb on + strand, within AO353_03850 at 822.987 kb on - strand, within AO353_03850 at 822.987 kb on - strand, within AO353_03850 at 822.987 kb on - strand, within AO353_03850 at 822.989 kb on + strand, within AO353_03850 at 822.990 kb on - strand, within AO353_03850 at 822.990 kb on - strand, within AO353_03850 at 822.990 kb on - strand, within AO353_03850 at 822.990 kb on - strand, within AO353_03850 at 822.990 kb on - strand, within AO353_03850 at 822.990 kb on - strand, within AO353_03850 at 823.010 kb on + strand, within AO353_03850 at 823.010 kb on + strand, within AO353_03850 at 823.010 kb on + strand, within AO353_03850 at 823.011 kb on - strand, within AO353_03850 at 823.011 kb on - strand, within AO353_03850 at 823.126 kb on + strand at 823.127 kb on - strand at 823.212 kb on + strand at 823.212 kb on + strand at 823.212 kb on + strand at 823.287 kb on + strand at 823.293 kb on + strand at 823.293 kb on + strand at 823.293 kb on + strand at 823.293 kb on + strand at 823.293 kb on + strand at 823.294 kb on - strand at 823.294 kb on - strand at 823.294 kb on - strand at 823.294 kb on - strand at 823.309 kb on + strand at 823.309 kb on + strand at 823.309 kb on + strand at 823.474 kb on + strand, within AO353_03855 at 823.474 kb on + strand, within AO353_03855 at 823.474 kb on + strand, within AO353_03855 at 823.474 kb on + strand, within AO353_03855 at 823.474 kb on + strand, within AO353_03855 at 823.475 kb on - strand, within AO353_03855 at 823.475 kb on - strand, within AO353_03855 at 823.475 kb on - strand, within AO353_03855 at 823.475 kb on - strand, within AO353_03855 at 823.475 kb on - strand, within AO353_03855 at 823.475 kb on - strand, within AO353_03855 at 823.531 kb on + strand, within AO353_03855 at 823.531 kb on + strand, within AO353_03855 at 823.531 kb on + strand, within AO353_03855 at 823.531 kb on + strand, within AO353_03855 at 823.531 kb on + strand, within AO353_03855 at 823.531 kb on + strand, within AO353_03855 at 823.531 kb on + strand, within AO353_03855 at 823.531 kb on + strand, within AO353_03855 at 823.531 kb on + strand, within AO353_03855 at 823.531 kb on + strand, within AO353_03855 at 823.531 kb on + strand, within AO353_03855 at 823.531 kb on + strand, within AO353_03855 at 823.532 kb on - strand, within AO353_03855 at 823.532 kb on - strand, within AO353_03855 at 823.532 kb on - strand, within AO353_03855 at 823.532 kb on - strand, within AO353_03855 at 823.532 kb on - strand, within AO353_03855 at 823.532 kb on - strand, within AO353_03855 at 823.532 kb on - strand, within AO353_03855 at 823.532 kb on - strand, within AO353_03855 at 823.532 kb on - strand, within AO353_03855 at 823.532 kb on - strand, within AO353_03855 at 823.532 kb on - strand, within AO353_03855 at 823.532 kb on - strand, within AO353_03855 at 823.532 kb on - strand, within AO353_03855 at 823.532 kb on - strand, within AO353_03855 at 823.532 kb on - strand, within AO353_03855 at 823.591 kb on + strand, within AO353_03855 at 823.591 kb on + strand, within AO353_03855 at 823.651 kb on + strand, within AO353_03855 at 823.651 kb on + strand, within AO353_03855 at 823.651 kb on + strand, within AO353_03855 at 823.652 kb on - strand, within AO353_03855 at 823.690 kb on + strand, within AO353_03855 at 823.690 kb on + strand, within AO353_03855 at 823.690 kb on + strand, within AO353_03855 at 823.690 kb on + strand, within AO353_03855 at 823.691 kb on - strand, within AO353_03855 at 823.691 kb on - strand, within AO353_03855 at 823.691 kb on - strand, within AO353_03855 at 823.732 kb on + strand, within AO353_03855 at 823.732 kb on + strand, within AO353_03855 at 823.732 kb on + strand, within AO353_03855 at 823.732 kb on + strand, within AO353_03855 at 823.732 kb on + strand, within AO353_03855 at 823.732 kb on + strand, within AO353_03855 at 823.732 kb on + strand, within AO353_03855 at 823.732 kb on + strand, within AO353_03855 at 823.733 kb on - strand, within AO353_03855 at 823.733 kb on - strand, within AO353_03855 at 823.733 kb on - strand, within AO353_03855 at 823.733 kb on - strand, within AO353_03855 at 823.733 kb on - strand, within AO353_03855 at 823.969 kb on + strand, within AO353_03855 at 823.969 kb on + strand, within AO353_03855 at 823.969 kb on + strand, within AO353_03855 at 823.970 kb on - strand, within AO353_03855 at 823.970 kb on - strand, within AO353_03855 at 823.970 kb on - strand, within AO353_03855 at 823.970 kb on - strand, within AO353_03855 at 823.970 kb on - strand, within AO353_03855 at 823.970 kb on - strand, within AO353_03855 at 824.005 kb on + strand, within AO353_03855 at 824.006 kb on - strand, within AO353_03855 at 824.033 kb on - strand, within AO353_03855 at 824.066 kb on - strand, within AO353_03855 at 824.176 kb on + strand, within AO353_03855 at 824.176 kb on + strand, within AO353_03855 at 824.177 kb on - strand, within AO353_03855 at 824.177 kb on - strand, within AO353_03855 at 824.225 kb on + strand, within AO353_03855 at 824.226 kb on - strand, within AO353_03855 at 824.226 kb on - strand, within AO353_03855 at 824.226 kb on - strand, within AO353_03855 at 824.226 kb on - strand, within AO353_03855 at 824.226 kb on - strand, within AO353_03855 at 824.421 kb on + strand at 824.422 kb on - strand at 824.479 kb on + strand at 824.479 kb on + strand at 824.479 kb on + strand at 824.479 kb on + strand at 824.480 kb on - strand at 824.480 kb on - strand at 824.480 kb on - strand at 824.480 kb on - strand at 824.480 kb on - strand at 824.480 kb on - strand at 824.480 kb on - strand at 824.487 kb on + strand at 824.487 kb on + strand at 824.487 kb on + strand at 824.487 kb on + strand at 824.487 kb on + strand at 824.488 kb on - strand at 824.488 kb on - strand at 824.488 kb on - strand at 824.488 kb on - strand at 824.488 kb on - strand at 824.491 kb on + strand at 824.491 kb on + strand at 824.491 kb on + strand at 824.491 kb on + strand at 824.491 kb on + strand at 824.491 kb on + strand at 824.491 kb on + strand at 824.491 kb on + strand at 824.491 kb on + strand at 824.491 kb on + strand at 824.491 kb on + strand at 824.492 kb on - strand at 824.492 kb on - strand at 824.492 kb on - strand at 824.492 kb on - strand at 824.492 kb on - strand at 824.498 kb on + strand at 824.499 kb on - strand at 824.548 kb on + strand at 824.549 kb on - strand at 824.549 kb on - strand at 824.549 kb on - strand at 824.549 kb on - strand at 824.706 kb on + strand at 824.706 kb on + strand at 824.706 kb on + strand at 824.706 kb on + strand at 824.707 kb on - strand at 824.707 kb on - strand at 824.707 kb on - strand at 824.707 kb on - strand at 824.707 kb on - strand at 824.767 kb on + strand at 825.034 kb on + strand, within AO353_03860 at 825.034 kb on + strand, within AO353_03860 at 825.034 kb on + strand, within AO353_03860 at 825.128 kb on - strand, within AO353_03860
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 822,516 - AO353_03850 0.23 +0.8 822,626 + AO353_03850 0.35 +1.1 822,626 + AO353_03850 0.35 +1.0 822,626 + AO353_03850 0.35 -1.6 822,627 - AO353_03850 0.36 +4.5 822,627 - AO353_03850 0.36 +1.4 822,627 - AO353_03850 0.36 -0.6 822,627 - AO353_03850 0.36 +0.2 822,627 - AO353_03850 0.36 +1.7 822,691 + AO353_03850 0.43 +1.2 822,691 + AO353_03850 0.43 -1.6 822,692 - AO353_03850 0.43 +1.0 822,706 + AO353_03850 0.44 +2.6 822,707 - AO353_03850 0.44 -2.0 822,707 - AO353_03850 0.44 +1.6 822,707 - AO353_03850 0.44 -2.3 822,707 - AO353_03850 0.44 -2.0 822,707 - AO353_03850 0.44 -0.0 822,722 + AO353_03850 0.46 -0.2 822,722 + AO353_03850 0.46 -1.0 822,722 + AO353_03850 0.46 -1.0 822,722 + AO353_03850 0.46 +2.0 822,722 + AO353_03850 0.46 -2.3 822,722 + AO353_03850 0.46 -1.0 822,722 + AO353_03850 0.46 +2.2 822,812 + AO353_03850 0.56 -1.0 822,812 + AO353_03850 0.56 +1.0 822,813 - AO353_03850 0.56 +1.7 822,905 + AO353_03850 0.66 -2.1 822,905 + AO353_03850 0.66 +1.1 822,905 + AO353_03850 0.66 +0.2 822,905 + AO353_03850 0.66 -2.0 822,906 - AO353_03850 0.66 -0.4 822,906 - AO353_03850 0.66 -2.6 822,906 - AO353_03850 0.66 +0.6 822,906 - AO353_03850 0.66 -1.0 822,929 - AO353_03850 0.69 +0.6 822,986 + AO353_03850 0.75 +2.5 822,986 + AO353_03850 0.75 -1.6 822,986 + AO353_03850 0.75 -1.0 822,986 + AO353_03850 0.75 -0.0 822,986 + AO353_03850 0.75 +1.1 822,986 + AO353_03850 0.75 +1.1 822,986 + AO353_03850 0.75 -2.6 822,986 + AO353_03850 0.75 -1.6 822,987 - AO353_03850 0.75 -2.6 822,987 - AO353_03850 0.75 +0.6 822,987 - AO353_03850 0.75 -3.3 822,989 + AO353_03850 0.75 -0.3 822,990 - AO353_03850 0.75 +1.6 822,990 - AO353_03850 0.75 -2.3 822,990 - AO353_03850 0.75 -3.9 822,990 - AO353_03850 0.75 +1.3 822,990 - AO353_03850 0.75 -2.6 822,990 - AO353_03850 0.75 -0.5 823,010 + AO353_03850 0.78 +2.3 823,010 + AO353_03850 0.78 +0.8 823,010 + AO353_03850 0.78 -1.6 823,011 - AO353_03850 0.78 -1.0 823,011 - AO353_03850 0.78 -2.0 823,126 + -2.0 823,127 - +1.6 823,212 + -0.0 823,212 + +3.0 823,212 + +0.7 823,287 + +1.0 823,293 + -1.6 823,293 + +1.7 823,293 + -1.0 823,293 + -0.8 823,293 + -2.3 823,294 - +1.0 823,294 - -2.1 823,294 - +1.3 823,294 - +0.4 823,309 + +0.2 823,309 + -1.0 823,309 + +1.8 823,474 + AO353_03855 0.10 -0.0 823,474 + AO353_03855 0.10 -1.3 823,474 + AO353_03855 0.10 +2.2 823,474 + AO353_03855 0.10 -2.0 823,474 + AO353_03855 0.10 -0.6 823,475 - AO353_03855 0.10 -0.7 823,475 - AO353_03855 0.10 +0.7 823,475 - AO353_03855 0.10 +0.2 823,475 - AO353_03855 0.10 -0.0 823,475 - AO353_03855 0.10 -0.0 823,475 - AO353_03855 0.10 -0.6 823,531 + AO353_03855 0.15 +3.0 823,531 + AO353_03855 0.15 -0.5 823,531 + AO353_03855 0.15 -1.6 823,531 + AO353_03855 0.15 +3.1 823,531 + AO353_03855 0.15 +0.7 823,531 + AO353_03855 0.15 +1.0 823,531 + AO353_03855 0.15 -1.3 823,531 + AO353_03855 0.15 -0.9 823,531 + AO353_03855 0.15 +0.5 823,531 + AO353_03855 0.15 -0.0 823,531 + AO353_03855 0.15 -0.3 823,531 + AO353_03855 0.15 -1.6 823,532 - AO353_03855 0.15 +1.7 823,532 - AO353_03855 0.15 -2.0 823,532 - AO353_03855 0.15 -0.5 823,532 - AO353_03855 0.15 -1.0 823,532 - AO353_03855 0.15 -1.0 823,532 - AO353_03855 0.15 +1.7 823,532 - AO353_03855 0.15 -2.0 823,532 - AO353_03855 0.15 -2.0 823,532 - AO353_03855 0.15 +0.6 823,532 - AO353_03855 0.15 +1.0 823,532 - AO353_03855 0.15 -1.6 823,532 - AO353_03855 0.15 +1.6 823,532 - AO353_03855 0.15 +1.6 823,532 - AO353_03855 0.15 -1.0 823,532 - AO353_03855 0.15 +1.6 823,591 + AO353_03855 0.21 -0.3 823,591 + AO353_03855 0.21 -1.0 823,651 + AO353_03855 0.26 -1.0 823,651 + AO353_03855 0.26 -2.3 823,651 + AO353_03855 0.26 -1.6 823,652 - AO353_03855 0.26 +0.3 823,690 + AO353_03855 0.30 -3.0 823,690 + AO353_03855 0.30 -0.0 823,690 + AO353_03855 0.30 +1.0 823,690 + AO353_03855 0.30 +0.7 823,691 - AO353_03855 0.30 +0.6 823,691 - AO353_03855 0.30 -0.0 823,691 - AO353_03855 0.30 -2.3 823,732 + AO353_03855 0.34 +0.8 823,732 + AO353_03855 0.34 -0.4 823,732 + AO353_03855 0.34 +0.5 823,732 + AO353_03855 0.34 +0.7 823,732 + AO353_03855 0.34 +1.0 823,732 + AO353_03855 0.34 -0.0 823,732 + AO353_03855 0.34 -1.0 823,732 + AO353_03855 0.34 +0.6 823,733 - AO353_03855 0.34 -0.2 823,733 - AO353_03855 0.34 +1.1 823,733 - AO353_03855 0.34 -2.0 823,733 - AO353_03855 0.34 -2.0 823,733 - AO353_03855 0.34 -1.4 823,969 + AO353_03855 0.55 -0.0 823,969 + AO353_03855 0.55 -0.0 823,969 + AO353_03855 0.55 -2.3 823,970 - AO353_03855 0.55 +1.5 823,970 - AO353_03855 0.55 -1.6 823,970 - AO353_03855 0.55 +0.3 823,970 - AO353_03855 0.55 -2.0 823,970 - AO353_03855 0.55 -2.0 823,970 - AO353_03855 0.55 -1.8 824,005 + AO353_03855 0.58 +1.6 824,006 - AO353_03855 0.58 -0.0 824,033 - AO353_03855 0.61 -2.6 824,066 - AO353_03855 0.64 +3.9 824,176 + AO353_03855 0.74 -0.0 824,176 + AO353_03855 0.74 -2.8 824,177 - AO353_03855 0.74 +2.0 824,177 - AO353_03855 0.74 -2.0 824,225 + AO353_03855 0.78 +0.5 824,226 - AO353_03855 0.78 -0.0 824,226 - AO353_03855 0.78 +0.4 824,226 - AO353_03855 0.78 -2.0 824,226 - AO353_03855 0.78 -2.8 824,226 - AO353_03855 0.78 +0.4 824,421 + -2.8 824,422 - -0.4 824,479 + +1.0 824,479 + -1.6 824,479 + -1.0 824,479 + -0.0 824,480 - +2.2 824,480 - -0.0 824,480 - -3.3 824,480 - +0.5 824,480 - +1.6 824,480 - +0.5 824,480 - -1.0 824,487 + -0.5 824,487 + +0.7 824,487 + -0.4 824,487 + +2.6 824,487 + -0.2 824,488 - +0.4 824,488 - -0.0 824,488 - +2.7 824,488 - +0.7 824,488 - -2.3 824,491 + +0.2 824,491 + -2.0 824,491 + -2.0 824,491 + -2.0 824,491 + -0.0 824,491 + -2.0 824,491 + -0.3 824,491 + -2.3 824,491 + -1.6 824,491 + -0.3 824,491 + +0.7 824,492 - -1.6 824,492 - +0.5 824,492 - -3.3 824,492 - -0.8 824,492 - -2.8 824,498 + -1.0 824,499 - -0.0 824,548 + -1.0 824,549 - -0.3 824,549 - -2.0 824,549 - -2.0 824,549 - -1.6 824,706 + -1.0 824,706 + -2.0 824,706 + -2.3 824,706 + -0.2 824,707 - +1.1 824,707 - +1.2 824,707 - -0.0 824,707 - +0.4 824,707 - +1.4 824,767 + +0.6 825,034 + AO353_03860 0.24 +2.6 825,034 + AO353_03860 0.24 -1.0 825,034 + AO353_03860 0.24 +0.7 825,128 - AO353_03860 0.31 -1.0
Or see this region's nucleotide sequence