Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03375 and AO353_03380 are separated by 105 nucleotides AO353_03380 and AO353_03385 are separated by 3 nucleotides AO353_03385 and AO353_03390 overlap by 8 nucleotides
AO353_03375: AO353_03375 - porin, at 718,163 to 719,509
_03375
AO353_03380: AO353_03380 - sugar ABC transporter ATP-binding protein, at 719,615 to 720,775
_03380
AO353_03385: AO353_03385 - sugar ABC transporter permease, at 720,779 to 721,624
_03385
AO353_03390: AO353_03390 - sugar ABC transporter permease, at 721,617 to 722,525
_03390
Position (kb) 719
720
721 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 718.673 kb on - strand, within AO353_03375 at 718.704 kb on + strand, within AO353_03375 at 718.704 kb on + strand, within AO353_03375 at 718.704 kb on + strand, within AO353_03375 at 718.704 kb on + strand, within AO353_03375 at 718.704 kb on + strand, within AO353_03375 at 718.704 kb on + strand, within AO353_03375 at 718.704 kb on + strand, within AO353_03375 at 718.704 kb on + strand, within AO353_03375 at 718.704 kb on + strand, within AO353_03375 at 718.705 kb on - strand, within AO353_03375 at 718.705 kb on - strand, within AO353_03375 at 718.705 kb on - strand, within AO353_03375 at 718.705 kb on - strand, within AO353_03375 at 718.705 kb on - strand, within AO353_03375 at 718.705 kb on - strand, within AO353_03375 at 718.705 kb on - strand, within AO353_03375 at 718.705 kb on - strand, within AO353_03375 at 718.720 kb on - strand, within AO353_03375 at 718.720 kb on - strand, within AO353_03375 at 718.845 kb on + strand, within AO353_03375 at 718.845 kb on + strand, within AO353_03375 at 718.845 kb on + strand, within AO353_03375 at 718.846 kb on - strand, within AO353_03375 at 718.846 kb on - strand, within AO353_03375 at 718.846 kb on - strand, within AO353_03375 at 718.863 kb on + strand, within AO353_03375 at 718.863 kb on + strand, within AO353_03375 at 718.863 kb on + strand, within AO353_03375 at 718.863 kb on + strand, within AO353_03375 at 718.863 kb on + strand, within AO353_03375 at 718.863 kb on + strand, within AO353_03375 at 718.863 kb on + strand, within AO353_03375 at 718.864 kb on - strand, within AO353_03375 at 718.864 kb on - strand, within AO353_03375 at 718.864 kb on - strand, within AO353_03375 at 718.864 kb on - strand, within AO353_03375 at 718.884 kb on + strand, within AO353_03375 at 718.884 kb on + strand, within AO353_03375 at 718.884 kb on + strand, within AO353_03375 at 718.884 kb on + strand, within AO353_03375 at 718.884 kb on + strand, within AO353_03375 at 718.885 kb on - strand, within AO353_03375 at 718.885 kb on - strand, within AO353_03375 at 718.885 kb on - strand at 718.885 kb on - strand, within AO353_03375 at 718.885 kb on - strand, within AO353_03375 at 718.885 kb on - strand, within AO353_03375 at 718.885 kb on - strand, within AO353_03375 at 718.885 kb on - strand, within AO353_03375 at 718.885 kb on - strand, within AO353_03375 at 718.885 kb on - strand, within AO353_03375 at 718.885 kb on - strand, within AO353_03375 at 718.885 kb on - strand, within AO353_03375 at 718.923 kb on + strand, within AO353_03375 at 718.923 kb on + strand, within AO353_03375 at 718.924 kb on - strand, within AO353_03375 at 718.924 kb on - strand, within AO353_03375 at 718.924 kb on - strand, within AO353_03375 at 719.023 kb on - strand, within AO353_03375 at 719.092 kb on + strand, within AO353_03375 at 719.092 kb on + strand, within AO353_03375 at 719.106 kb on + strand, within AO353_03375 at 719.107 kb on - strand, within AO353_03375 at 719.107 kb on - strand, within AO353_03375 at 719.107 kb on - strand, within AO353_03375 at 719.107 kb on - strand, within AO353_03375 at 719.271 kb on + strand, within AO353_03375 at 719.295 kb on + strand, within AO353_03375 at 719.295 kb on + strand, within AO353_03375 at 719.295 kb on + strand, within AO353_03375 at 719.295 kb on + strand, within AO353_03375 at 719.296 kb on - strand, within AO353_03375 at 719.331 kb on + strand, within AO353_03375 at 719.331 kb on + strand, within AO353_03375 at 719.435 kb on + strand at 719.435 kb on + strand at 719.435 kb on + strand at 719.436 kb on - strand at 719.436 kb on - strand at 719.436 kb on - strand at 719.436 kb on - strand at 719.436 kb on - strand at 719.482 kb on + strand at 719.482 kb on + strand at 719.482 kb on + strand at 719.482 kb on + strand at 719.482 kb on + strand at 719.482 kb on + strand at 719.483 kb on - strand at 719.483 kb on - strand at 719.483 kb on - strand at 719.483 kb on - strand at 719.513 kb on + strand at 719.513 kb on + strand at 719.513 kb on + strand at 719.513 kb on + strand at 719.513 kb on + strand at 719.513 kb on + strand at 719.513 kb on + strand at 719.513 kb on + strand at 719.513 kb on + strand at 719.514 kb on - strand at 719.514 kb on - strand at 719.514 kb on - strand at 719.527 kb on + strand at 719.527 kb on + strand at 719.528 kb on - strand at 719.528 kb on - strand at 719.528 kb on - strand at 719.528 kb on - strand at 719.528 kb on - strand at 719.528 kb on - strand at 719.533 kb on + strand at 719.533 kb on + strand at 719.534 kb on - strand at 719.536 kb on + strand at 719.536 kb on + strand at 719.536 kb on + strand at 719.537 kb on - strand at 719.537 kb on - strand at 719.547 kb on - strand at 719.551 kb on - strand at 719.551 kb on - strand at 719.561 kb on - strand at 720.105 kb on + strand, within AO353_03380 at 720.105 kb on + strand, within AO353_03380 at 720.105 kb on + strand, within AO353_03380 at 720.105 kb on + strand, within AO353_03380 at 720.105 kb on + strand, within AO353_03380 at 720.106 kb on - strand, within AO353_03380 at 720.106 kb on - strand, within AO353_03380 at 720.106 kb on - strand, within AO353_03380 at 720.204 kb on + strand, within AO353_03380 at 720.204 kb on + strand, within AO353_03380 at 720.205 kb on - strand, within AO353_03380 at 720.205 kb on - strand, within AO353_03380 at 720.306 kb on + strand, within AO353_03380 at 720.306 kb on + strand, within AO353_03380 at 720.306 kb on + strand, within AO353_03380 at 720.306 kb on + strand, within AO353_03380 at 720.306 kb on + strand, within AO353_03380 at 720.306 kb on + strand, within AO353_03380 at 720.307 kb on - strand, within AO353_03380 at 720.307 kb on - strand, within AO353_03380 at 720.520 kb on - strand, within AO353_03380 at 720.520 kb on - strand, within AO353_03380 at 720.758 kb on + strand at 720.759 kb on - strand at 720.759 kb on - strand at 720.759 kb on - strand at 720.759 kb on - strand at 720.780 kb on + strand at 720.781 kb on - strand at 720.819 kb on + strand at 720.819 kb on + strand at 720.819 kb on + strand at 720.819 kb on + strand at 720.819 kb on + strand at 720.819 kb on + strand at 720.819 kb on + strand at 720.820 kb on - strand at 720.820 kb on - strand at 720.820 kb on - strand at 720.820 kb on - strand at 720.833 kb on + strand at 720.833 kb on + strand at 720.833 kb on + strand at 720.833 kb on + strand at 720.833 kb on + strand at 720.833 kb on + strand at 720.833 kb on + strand at 720.833 kb on + strand at 720.833 kb on + strand at 720.834 kb on - strand at 720.834 kb on - strand at 720.834 kb on - strand at 720.834 kb on - strand at 720.834 kb on - strand at 720.834 kb on - strand at 720.837 kb on + strand at 720.837 kb on + strand at 720.837 kb on + strand at 720.837 kb on + strand at 720.838 kb on - strand at 720.838 kb on - strand at 720.838 kb on - strand at 720.838 kb on - strand at 720.838 kb on - strand at 720.838 kb on - strand at 720.838 kb on - strand at 720.838 kb on - strand at 720.891 kb on + strand, within AO353_03385 at 720.891 kb on + strand, within AO353_03385 at 720.891 kb on + strand, within AO353_03385 at 720.891 kb on + strand, within AO353_03385 at 720.891 kb on + strand, within AO353_03385 at 720.891 kb on + strand, within AO353_03385 at 720.891 kb on + strand, within AO353_03385 at 720.892 kb on - strand, within AO353_03385 at 720.892 kb on - strand, within AO353_03385 at 720.892 kb on - strand, within AO353_03385 at 721.131 kb on + strand, within AO353_03385 at 721.131 kb on + strand, within AO353_03385 at 721.131 kb on + strand, within AO353_03385 at 721.132 kb on - strand, within AO353_03385 at 721.132 kb on - strand, within AO353_03385 at 721.132 kb on - strand, within AO353_03385 at 721.132 kb on - strand, within AO353_03385 at 721.134 kb on + strand, within AO353_03385 at 721.134 kb on + strand, within AO353_03385 at 721.134 kb on + strand, within AO353_03385 at 721.134 kb on + strand, within AO353_03385 at 721.134 kb on + strand, within AO353_03385 at 721.134 kb on + strand, within AO353_03385 at 721.134 kb on + strand, within AO353_03385 at 721.134 kb on + strand, within AO353_03385 at 721.134 kb on + strand, within AO353_03385 at 721.134 kb on + strand, within AO353_03385 at 721.135 kb on - strand, within AO353_03385 at 721.135 kb on - strand, within AO353_03385 at 721.135 kb on - strand, within AO353_03385 at 721.135 kb on - strand, within AO353_03385 at 721.135 kb on - strand, within AO353_03385 at 721.135 kb on - strand, within AO353_03385 at 721.135 kb on - strand, within AO353_03385 at 721.135 kb on - strand, within AO353_03385 at 721.135 kb on - strand, within AO353_03385 at 721.135 kb on - strand, within AO353_03385 at 721.135 kb on - strand, within AO353_03385 at 721.135 kb on - strand, within AO353_03385 at 721.135 kb on - strand, within AO353_03385 at 721.170 kb on + strand, within AO353_03385 at 721.335 kb on + strand, within AO353_03385 at 721.335 kb on + strand, within AO353_03385 at 721.336 kb on - strand, within AO353_03385 at 721.336 kb on - strand, within AO353_03385 at 721.336 kb on - strand, within AO353_03385 at 721.407 kb on + strand, within AO353_03385 at 721.407 kb on + strand, within AO353_03385 at 721.415 kb on + strand, within AO353_03385 at 721.542 kb on + strand at 721.542 kb on + strand at 721.542 kb on + strand at 721.543 kb on - strand at 721.572 kb on + strand at 721.572 kb on + strand at 721.572 kb on + strand at 721.573 kb on - strand at 721.573 kb on - strand at 721.573 kb on - strand at 721.573 kb on - strand at 721.618 kb on + strand at 721.618 kb on + strand at 721.619 kb on - strand at 721.619 kb on - strand at 721.648 kb on + strand at 721.649 kb on - strand at 721.649 kb on - strand at 721.655 kb on - strand at 721.655 kb on - strand at 721.655 kb on - strand at 721.744 kb on + strand, within AO353_03390 at 721.744 kb on + strand, within AO353_03390 at 721.744 kb on + strand, within AO353_03390 at 721.744 kb on + strand, within AO353_03390 at 721.744 kb on + strand, within AO353_03390 at 721.744 kb on + strand, within AO353_03390 at 721.744 kb on + strand, within AO353_03390 at 721.744 kb on + strand, within AO353_03390 at 721.744 kb on + strand, within AO353_03390 at 721.745 kb on - strand, within AO353_03390 at 721.745 kb on - strand, within AO353_03390 at 721.745 kb on - strand, within AO353_03390 at 721.745 kb on - strand, within AO353_03390 at 721.745 kb on - strand, within AO353_03390 at 721.745 kb on - strand, within AO353_03390 at 721.745 kb on - strand, within AO353_03390 at 721.745 kb on - strand, within AO353_03390 at 721.774 kb on + strand, within AO353_03390 at 721.775 kb on - strand, within AO353_03390 at 721.775 kb on - strand, within AO353_03390
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 718,673 - AO353_03375 0.38 -0.5 718,704 + AO353_03375 0.40 +2.9 718,704 + AO353_03375 0.40 -3.5 718,704 + AO353_03375 0.40 -0.6 718,704 + AO353_03375 0.40 +0.5 718,704 + AO353_03375 0.40 -0.1 718,704 + AO353_03375 0.40 -1.1 718,704 + AO353_03375 0.40 -2.1 718,704 + AO353_03375 0.40 -0.1 718,704 + AO353_03375 0.40 +1.9 718,705 - AO353_03375 0.40 +1.1 718,705 - AO353_03375 0.40 -0.1 718,705 - AO353_03375 0.40 +1.4 718,705 - AO353_03375 0.40 -2.9 718,705 - AO353_03375 0.40 -0.1 718,705 - AO353_03375 0.40 +0.3 718,705 - AO353_03375 0.40 -1.6 718,705 - AO353_03375 0.40 -1.6 718,720 - AO353_03375 0.41 -2.4 718,720 - AO353_03375 0.41 +0.8 718,845 + AO353_03375 0.51 -2.1 718,845 + AO353_03375 0.51 -0.1 718,845 + AO353_03375 0.51 -1.1 718,846 - AO353_03375 0.51 -0.1 718,846 - AO353_03375 0.51 +0.3 718,846 - AO353_03375 0.51 -0.1 718,863 + AO353_03375 0.52 -2.6 718,863 + AO353_03375 0.52 +0.3 718,863 + AO353_03375 0.52 -2.1 718,863 + AO353_03375 0.52 +0.2 718,863 + AO353_03375 0.52 +1.3 718,863 + AO353_03375 0.52 -0.4 718,863 + AO353_03375 0.52 -0.1 718,864 - AO353_03375 0.52 +0.6 718,864 - AO353_03375 0.52 -2.1 718,864 - AO353_03375 0.52 +0.3 718,864 - AO353_03375 0.52 +0.8 718,884 + AO353_03375 0.54 -1.4 718,884 + AO353_03375 0.54 -2.1 718,884 + AO353_03375 0.54 +1.4 718,884 + AO353_03375 0.54 -2.1 718,884 + AO353_03375 0.54 -0.6 718,885 - AO353_03375 0.54 -2.4 718,885 - AO353_03375 0.54 +0.8 718,885 - -0.1 718,885 - AO353_03375 0.54 +0.9 718,885 - AO353_03375 0.54 +1.4 718,885 - AO353_03375 0.54 -0.1 718,885 - AO353_03375 0.54 +0.6 718,885 - AO353_03375 0.54 +0.5 718,885 - AO353_03375 0.54 -2.6 718,885 - AO353_03375 0.54 -0.1 718,885 - AO353_03375 0.54 -0.1 718,885 - AO353_03375 0.54 -0.4 718,923 + AO353_03375 0.56 -1.6 718,923 + AO353_03375 0.56 +0.4 718,924 - AO353_03375 0.56 +0.9 718,924 - AO353_03375 0.56 +0.4 718,924 - AO353_03375 0.56 +3.3 719,023 - AO353_03375 0.64 -1.6 719,092 + AO353_03375 0.69 +3.0 719,092 + AO353_03375 0.69 -0.1 719,106 + AO353_03375 0.70 -2.1 719,107 - AO353_03375 0.70 -1.6 719,107 - AO353_03375 0.70 -0.1 719,107 - AO353_03375 0.70 +2.9 719,107 - AO353_03375 0.70 -2.4 719,271 + AO353_03375 0.82 -0.1 719,295 + AO353_03375 0.84 +0.5 719,295 + AO353_03375 0.84 -2.1 719,295 + AO353_03375 0.84 +0.9 719,295 + AO353_03375 0.84 -2.4 719,296 - AO353_03375 0.84 +4.0 719,331 + AO353_03375 0.87 -1.6 719,331 + AO353_03375 0.87 -3.1 719,435 + -1.6 719,435 + -1.6 719,435 + -0.3 719,436 - -0.1 719,436 - -1.6 719,436 - -0.1 719,436 - +0.6 719,436 - +1.9 719,482 + +0.7 719,482 + -1.1 719,482 + +1.8 719,482 + -1.1 719,482 + -0.1 719,482 + -3.4 719,483 - +0.8 719,483 - +0.2 719,483 - +2.3 719,483 - +2.1 719,513 + -2.1 719,513 + -2.1 719,513 + -2.4 719,513 + -0.1 719,513 + +1.5 719,513 + -1.6 719,513 + -0.9 719,513 + -0.1 719,513 + -0.1 719,514 - -3.1 719,514 - -1.6 719,514 - -0.4 719,527 + +0.5 719,527 + -0.1 719,528 - +0.9 719,528 - +0.5 719,528 - -1.1 719,528 - +0.4 719,528 - -3.2 719,528 - -0.6 719,533 + -1.6 719,533 + +0.9 719,534 - -1.2 719,536 + -0.1 719,536 + +1.6 719,536 + -2.6 719,537 - +1.5 719,537 - -1.1 719,547 - +0.4 719,551 - +2.4 719,551 - -0.9 719,561 - +1.3 720,105 + AO353_03380 0.42 -0.1 720,105 + AO353_03380 0.42 +0.9 720,105 + AO353_03380 0.42 +1.4 720,105 + AO353_03380 0.42 +1.5 720,105 + AO353_03380 0.42 +1.9 720,106 - AO353_03380 0.42 +1.1 720,106 - AO353_03380 0.42 -1.1 720,106 - AO353_03380 0.42 +2.0 720,204 + AO353_03380 0.51 -1.4 720,204 + AO353_03380 0.51 -0.3 720,205 - AO353_03380 0.51 -1.3 720,205 - AO353_03380 0.51 +1.4 720,306 + AO353_03380 0.60 -1.1 720,306 + AO353_03380 0.60 +1.7 720,306 + AO353_03380 0.60 +1.2 720,306 + AO353_03380 0.60 +0.9 720,306 + AO353_03380 0.60 +1.3 720,306 + AO353_03380 0.60 -1.6 720,307 - AO353_03380 0.60 +0.5 720,307 - AO353_03380 0.60 -1.1 720,520 - AO353_03380 0.78 -2.4 720,520 - AO353_03380 0.78 +0.4 720,758 + +0.8 720,759 - -0.0 720,759 - -0.3 720,759 - -0.0 720,759 - -0.0 720,780 + -1.0 720,781 - +2.0 720,819 + +0.3 720,819 + -1.0 720,819 + -0.0 720,819 + -0.0 720,819 + +2.3 720,819 + +1.8 720,819 + -1.0 720,820 - -1.0 720,820 - -1.6 720,820 - -1.0 720,820 - -1.0 720,833 + +0.5 720,833 + -1.5 720,833 + -1.0 720,833 + +0.2 720,833 + -0.0 720,833 + +0.4 720,833 + -1.0 720,833 + -1.0 720,833 + +1.0 720,834 - +3.0 720,834 - -1.0 720,834 - +1.2 720,834 - +1.5 720,834 - +3.0 720,834 - +0.5 720,837 + +1.6 720,837 + -1.6 720,837 + +3.8 720,837 + -3.4 720,838 - -0.0 720,838 - +0.5 720,838 - +1.3 720,838 - +1.3 720,838 - +1.4 720,838 - -0.0 720,838 - -0.4 720,838 - -0.2 720,891 + AO353_03385 0.13 +2.1 720,891 + AO353_03385 0.13 -2.9 720,891 + AO353_03385 0.13 -1.3 720,891 + AO353_03385 0.13 +0.5 720,891 + AO353_03385 0.13 -1.0 720,891 + AO353_03385 0.13 -1.6 720,891 + AO353_03385 0.13 +2.8 720,892 - AO353_03385 0.13 +2.2 720,892 - AO353_03385 0.13 -2.6 720,892 - AO353_03385 0.13 -1.0 721,131 + AO353_03385 0.42 -1.6 721,131 + AO353_03385 0.42 -0.0 721,131 + AO353_03385 0.42 +3.2 721,132 - AO353_03385 0.42 -2.4 721,132 - AO353_03385 0.42 -1.2 721,132 - AO353_03385 0.42 -1.0 721,132 - AO353_03385 0.42 +1.5 721,134 + AO353_03385 0.42 -0.6 721,134 + AO353_03385 0.42 +0.4 721,134 + AO353_03385 0.42 -1.5 721,134 + AO353_03385 0.42 -0.3 721,134 + AO353_03385 0.42 +1.5 721,134 + AO353_03385 0.42 +1.3 721,134 + AO353_03385 0.42 -0.3 721,134 + AO353_03385 0.42 +0.8 721,134 + AO353_03385 0.42 +2.4 721,134 + AO353_03385 0.42 +0.3 721,135 - AO353_03385 0.42 -1.0 721,135 - AO353_03385 0.42 +0.6 721,135 - AO353_03385 0.42 +1.2 721,135 - AO353_03385 0.42 -1.6 721,135 - AO353_03385 0.42 +1.0 721,135 - AO353_03385 0.42 +1.8 721,135 - AO353_03385 0.42 +0.9 721,135 - AO353_03385 0.42 -1.6 721,135 - AO353_03385 0.42 +1.5 721,135 - AO353_03385 0.42 -3.0 721,135 - AO353_03385 0.42 -0.3 721,135 - AO353_03385 0.42 -1.0 721,135 - AO353_03385 0.42 +0.1 721,170 + AO353_03385 0.46 -1.6 721,335 + AO353_03385 0.66 +1.0 721,335 + AO353_03385 0.66 -0.3 721,336 - AO353_03385 0.66 -1.0 721,336 - AO353_03385 0.66 +2.3 721,336 - AO353_03385 0.66 -0.0 721,407 + AO353_03385 0.74 +0.4 721,407 + AO353_03385 0.74 -2.0 721,415 + AO353_03385 0.75 +1.0 721,542 + -1.6 721,542 + -2.4 721,542 + -3.9 721,543 - -0.0 721,572 + +1.2 721,572 + -0.0 721,572 + +3.3 721,573 - +1.5 721,573 - -1.6 721,573 - +0.5 721,573 - +0.2 721,618 + -0.6 721,618 + +1.1 721,619 - -3.4 721,619 - -1.0 721,648 + +2.1 721,649 - -2.4 721,649 - -2.4 721,655 - -1.0 721,655 - +0.4 721,655 - +0.5 721,744 + AO353_03390 0.14 +3.3 721,744 + AO353_03390 0.14 -0.6 721,744 + AO353_03390 0.14 -0.6 721,744 + AO353_03390 0.14 -1.0 721,744 + AO353_03390 0.14 -1.0 721,744 + AO353_03390 0.14 +3.0 721,744 + AO353_03390 0.14 +1.2 721,744 + AO353_03390 0.14 +0.8 721,744 + AO353_03390 0.14 -0.6 721,745 - AO353_03390 0.14 -1.4 721,745 - AO353_03390 0.14 +0.5 721,745 - AO353_03390 0.14 +1.5 721,745 - AO353_03390 0.14 -1.9 721,745 - AO353_03390 0.14 +1.1 721,745 - AO353_03390 0.14 +2.0 721,745 - AO353_03390 0.14 -1.0 721,745 - AO353_03390 0.14 -0.4 721,774 + AO353_03390 0.17 +2.3 721,775 - AO353_03390 0.17 +0.2 721,775 - AO353_03390 0.17 -1.0
Or see this region's nucleotide sequence