Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_01310 and AO353_01315 are separated by 140 nucleotides AO353_01315 and AO353_01320 are separated by 79 nucleotides AO353_01320 and AO353_01325 are separated by 238 nucleotides
AO353_01310: AO353_01310 - radical SAM protein, at 284,196 to 285,164
_01310
AO353_01315: AO353_01315 - TetR family transcriptional regulator, at 285,305 to 285,943
_01315
AO353_01320: AO353_01320 - class V aminotransferase, at 286,023 to 287,156
_01320
AO353_01325: AO353_01325 - hydrolase TatD, at 287,395 to 288,183
_01325
Position (kb) 286
287
288 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 285.085 kb on + strand at 285.085 kb on + strand at 285.085 kb on + strand at 285.085 kb on + strand at 285.085 kb on + strand at 285.085 kb on + strand at 285.085 kb on + strand at 285.085 kb on + strand at 285.085 kb on + strand at 285.086 kb on - strand at 285.086 kb on - strand at 285.086 kb on - strand at 285.086 kb on - strand at 285.086 kb on - strand at 285.086 kb on - strand at 285.089 kb on + strand at 285.089 kb on + strand at 285.089 kb on + strand at 285.089 kb on + strand at 285.090 kb on - strand at 285.090 kb on - strand at 285.090 kb on - strand at 285.097 kb on + strand at 285.097 kb on + strand at 285.097 kb on + strand at 285.097 kb on + strand at 285.097 kb on + strand at 285.097 kb on + strand at 285.097 kb on + strand at 285.098 kb on - strand at 285.098 kb on - strand at 285.098 kb on - strand at 285.098 kb on - strand at 285.183 kb on + strand at 285.183 kb on + strand at 285.184 kb on - strand at 285.184 kb on - strand at 285.224 kb on + strand at 285.230 kb on + strand at 285.230 kb on + strand at 285.231 kb on - strand at 285.231 kb on - strand at 285.244 kb on + strand at 285.244 kb on + strand at 285.245 kb on - strand at 285.245 kb on - strand at 285.245 kb on - strand at 285.245 kb on - strand at 285.247 kb on - strand at 285.247 kb on - strand at 285.267 kb on + strand at 285.267 kb on + strand at 285.267 kb on + strand at 285.268 kb on - strand at 285.288 kb on + strand at 285.289 kb on - strand at 285.426 kb on + strand, within AO353_01315 at 285.427 kb on - strand, within AO353_01315 at 285.468 kb on + strand, within AO353_01315 at 285.468 kb on + strand, within AO353_01315 at 285.469 kb on - strand, within AO353_01315 at 285.478 kb on - strand, within AO353_01315 at 285.478 kb on - strand, within AO353_01315 at 285.478 kb on - strand, within AO353_01315 at 285.669 kb on + strand, within AO353_01315 at 285.670 kb on - strand, within AO353_01315 at 285.670 kb on - strand, within AO353_01315 at 285.691 kb on + strand, within AO353_01315 at 285.742 kb on - strand, within AO353_01315 at 285.762 kb on + strand, within AO353_01315 at 285.762 kb on + strand, within AO353_01315 at 285.762 kb on + strand, within AO353_01315 at 285.762 kb on + strand, within AO353_01315 at 285.762 kb on + strand, within AO353_01315 at 285.762 kb on + strand, within AO353_01315 at 285.762 kb on + strand, within AO353_01315 at 285.763 kb on - strand, within AO353_01315 at 285.763 kb on - strand, within AO353_01315 at 285.763 kb on - strand, within AO353_01315 at 285.763 kb on - strand, within AO353_01315 at 285.763 kb on - strand, within AO353_01315 at 285.763 kb on - strand, within AO353_01315 at 285.763 kb on - strand, within AO353_01315 at 285.792 kb on + strand, within AO353_01315 at 285.792 kb on + strand, within AO353_01315 at 285.792 kb on + strand, within AO353_01315 at 285.792 kb on + strand at 285.793 kb on - strand, within AO353_01315 at 285.793 kb on - strand, within AO353_01315 at 285.793 kb on - strand, within AO353_01315 at 285.793 kb on - strand, within AO353_01315 at 285.793 kb on - strand, within AO353_01315 at 285.793 kb on - strand, within AO353_01315 at 285.793 kb on - strand, within AO353_01315 at 285.925 kb on + strand at 285.925 kb on + strand at 285.937 kb on + strand at 285.937 kb on + strand at 285.938 kb on - strand at 285.938 kb on - strand at 285.943 kb on + strand at 285.944 kb on - strand at 285.958 kb on - strand at 285.969 kb on + strand at 285.969 kb on + strand at 285.970 kb on - strand at 285.981 kb on + strand at 285.985 kb on - strand at 285.985 kb on - strand at 285.991 kb on - strand at 285.991 kb on - strand at 285.991 kb on - strand at 285.991 kb on - strand at 286.028 kb on + strand at 286.029 kb on - strand at 286.048 kb on + strand at 286.049 kb on - strand at 286.147 kb on + strand, within AO353_01320 at 286.147 kb on + strand, within AO353_01320 at 286.147 kb on + strand, within AO353_01320 at 286.164 kb on + strand, within AO353_01320 at 286.221 kb on - strand, within AO353_01320 at 286.259 kb on + strand, within AO353_01320 at 286.260 kb on - strand, within AO353_01320 at 286.605 kb on + strand, within AO353_01320 at 286.605 kb on + strand, within AO353_01320 at 286.605 kb on + strand, within AO353_01320 at 286.606 kb on - strand, within AO353_01320 at 286.606 kb on - strand, within AO353_01320 at 286.606 kb on - strand, within AO353_01320 at 286.606 kb on - strand, within AO353_01320 at 286.606 kb on - strand, within AO353_01320 at 286.606 kb on - strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.674 kb on + strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.675 kb on - strand, within AO353_01320 at 286.678 kb on + strand, within AO353_01320 at 286.678 kb on + strand, within AO353_01320 at 286.678 kb on + strand, within AO353_01320 at 286.678 kb on + strand, within AO353_01320 at 286.678 kb on + strand, within AO353_01320 at 286.679 kb on - strand, within AO353_01320 at 286.679 kb on - strand, within AO353_01320 at 286.679 kb on - strand, within AO353_01320 at 286.749 kb on + strand, within AO353_01320 at 286.749 kb on + strand, within AO353_01320 at 286.750 kb on - strand, within AO353_01320 at 286.750 kb on - strand, within AO353_01320 at 286.942 kb on + strand, within AO353_01320 at 287.023 kb on - strand, within AO353_01320 at 287.023 kb on - strand, within AO353_01320 at 287.095 kb on - strand at 287.095 kb on - strand at 287.110 kb on + strand at 287.111 kb on - strand at 287.111 kb on - strand at 287.111 kb on - strand at 287.177 kb on + strand at 287.178 kb on - strand at 287.178 kb on - strand at 287.178 kb on - strand at 287.178 kb on - strand at 287.227 kb on + strand at 287.228 kb on - strand at 287.228 kb on - strand at 287.237 kb on + strand at 287.237 kb on + strand at 287.237 kb on + strand at 287.238 kb on - strand at 287.238 kb on - strand at 287.238 kb on - strand at 287.238 kb on - strand at 287.287 kb on + strand at 287.287 kb on + strand at 287.288 kb on - strand at 287.302 kb on + strand at 287.303 kb on - strand at 287.313 kb on + strand at 287.313 kb on + strand at 287.313 kb on + strand at 287.314 kb on - strand at 287.319 kb on + strand at 287.319 kb on + strand at 287.319 kb on + strand at 287.320 kb on - strand at 287.320 kb on - strand at 287.445 kb on + strand at 287.446 kb on - strand at 287.469 kb on - strand at 287.469 kb on - strand at 287.516 kb on + strand, within AO353_01325 at 287.517 kb on - strand, within AO353_01325 at 287.562 kb on - strand, within AO353_01325 at 287.562 kb on - strand, within AO353_01325 at 287.664 kb on + strand, within AO353_01325 at 287.664 kb on + strand, within AO353_01325 at 287.665 kb on - strand, within AO353_01325 at 287.666 kb on + strand, within AO353_01325 at 287.667 kb on - strand, within AO353_01325 at 287.667 kb on - strand, within AO353_01325 at 287.769 kb on + strand, within AO353_01325 at 287.879 kb on + strand, within AO353_01325 at 287.879 kb on + strand, within AO353_01325 at 287.885 kb on + strand, within AO353_01325 at 287.886 kb on - strand, within AO353_01325 at 288.018 kb on - strand, within AO353_01325
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 285,085 + +3.6 285,085 + -1.2 285,085 + -2.5 285,085 + -0.1 285,085 + -1.8 285,085 + +0.4 285,085 + -0.2 285,085 + -0.2 285,085 + -2.5 285,086 - +0.8 285,086 - -3.2 285,086 - -0.2 285,086 - +1.6 285,086 - +0.4 285,086 - -0.8 285,089 + +1.7 285,089 + +0.8 285,089 + -2.2 285,089 + -0.2 285,090 - -1.2 285,090 - +0.6 285,090 - -1.8 285,097 + +0.6 285,097 + -1.6 285,097 + -3.0 285,097 + -1.8 285,097 + +0.8 285,097 + +0.7 285,097 + +0.8 285,098 - -1.2 285,098 - -1.5 285,098 - +3.4 285,098 - -2.5 285,183 + -1.2 285,183 + +0.4 285,184 - -2.2 285,184 - -2.5 285,224 + +0.7 285,230 + -1.2 285,230 + -0.2 285,231 - -1.2 285,231 - -1.8 285,244 + +1.6 285,244 + +1.2 285,245 - -2.0 285,245 - -2.2 285,245 - +2.2 285,245 - +0.0 285,247 - +1.0 285,247 - +1.2 285,267 + -0.9 285,267 + -0.2 285,267 + -3.0 285,268 - -1.8 285,288 + -1.8 285,289 - -1.8 285,426 + AO353_01315 0.19 -0.2 285,427 - AO353_01315 0.19 +0.4 285,468 + AO353_01315 0.26 +1.4 285,468 + AO353_01315 0.26 -1.8 285,469 - AO353_01315 0.26 -1.4 285,478 - AO353_01315 0.27 +1.6 285,478 - AO353_01315 0.27 -1.2 285,478 - AO353_01315 0.27 -0.2 285,669 + AO353_01315 0.57 -1.2 285,670 - AO353_01315 0.57 +1.6 285,670 - AO353_01315 0.57 -0.8 285,691 + AO353_01315 0.60 -1.4 285,742 - AO353_01315 0.68 -0.2 285,762 + AO353_01315 0.72 +0.8 285,762 + AO353_01315 0.72 +2.4 285,762 + AO353_01315 0.72 -1.2 285,762 + AO353_01315 0.72 +0.3 285,762 + AO353_01315 0.72 -2.2 285,762 + AO353_01315 0.72 -1.2 285,762 + AO353_01315 0.72 -1.8 285,763 - AO353_01315 0.72 -0.2 285,763 - AO353_01315 0.72 +2.4 285,763 - AO353_01315 0.72 +2.8 285,763 - AO353_01315 0.72 -0.2 285,763 - AO353_01315 0.72 +2.2 285,763 - AO353_01315 0.72 -3.0 285,763 - AO353_01315 0.72 -1.8 285,792 + AO353_01315 0.76 +2.2 285,792 + AO353_01315 0.76 +1.2 285,792 + AO353_01315 0.76 -0.2 285,792 + -1.2 285,793 - AO353_01315 0.76 -3.3 285,793 - AO353_01315 0.76 +0.0 285,793 - AO353_01315 0.76 +0.6 285,793 - AO353_01315 0.76 +2.1 285,793 - AO353_01315 0.76 -1.8 285,793 - AO353_01315 0.76 -0.2 285,793 - AO353_01315 0.76 +1.2 285,925 + +1.4 285,925 + +1.2 285,937 + -0.2 285,937 + -1.5 285,938 - -2.8 285,938 - -0.5 285,943 + -1.2 285,944 - +0.8 285,958 - -0.2 285,969 + -1.2 285,969 + -1.8 285,970 - -1.8 285,981 + +2.4 285,985 - +1.6 285,985 - -0.2 285,991 - -0.8 285,991 - -1.8 285,991 - +0.6 285,991 - -1.8 286,028 + -1.2 286,029 - -0.6 286,048 + -3.5 286,049 - -0.9 286,147 + AO353_01320 0.11 -1.2 286,147 + AO353_01320 0.11 +2.1 286,147 + AO353_01320 0.11 -1.8 286,164 + AO353_01320 0.12 +2.3 286,221 - AO353_01320 0.17 -1.8 286,259 + AO353_01320 0.21 +0.5 286,260 - AO353_01320 0.21 -0.2 286,605 + AO353_01320 0.51 -0.2 286,605 + AO353_01320 0.51 +1.4 286,605 + AO353_01320 0.51 -1.8 286,606 - AO353_01320 0.51 +0.7 286,606 - AO353_01320 0.51 -0.8 286,606 - AO353_01320 0.51 -0.2 286,606 - AO353_01320 0.51 -0.2 286,606 - AO353_01320 0.51 -1.2 286,606 - AO353_01320 0.51 -0.4 286,674 + AO353_01320 0.57 -2.2 286,674 + AO353_01320 0.57 -1.8 286,674 + AO353_01320 0.57 -1.8 286,674 + AO353_01320 0.57 -1.2 286,674 + AO353_01320 0.57 -1.8 286,674 + AO353_01320 0.57 -1.2 286,674 + AO353_01320 0.57 -1.2 286,674 + AO353_01320 0.57 -1.8 286,674 + AO353_01320 0.57 -0.2 286,674 + AO353_01320 0.57 -1.5 286,674 + AO353_01320 0.57 +1.6 286,674 + AO353_01320 0.57 -2.2 286,674 + AO353_01320 0.57 +3.3 286,674 + AO353_01320 0.57 +1.4 286,674 + AO353_01320 0.57 +3.3 286,674 + AO353_01320 0.57 -1.2 286,674 + AO353_01320 0.57 +2.7 286,674 + AO353_01320 0.57 -0.2 286,674 + AO353_01320 0.57 +0.1 286,674 + AO353_01320 0.57 +1.0 286,674 + AO353_01320 0.57 +0.2 286,674 + AO353_01320 0.57 -1.2 286,674 + AO353_01320 0.57 +2.5 286,674 + AO353_01320 0.57 -0.2 286,674 + AO353_01320 0.57 -1.8 286,674 + AO353_01320 0.57 +0.6 286,674 + AO353_01320 0.57 -1.4 286,674 + AO353_01320 0.57 +0.5 286,675 - AO353_01320 0.57 +2.1 286,675 - AO353_01320 0.57 +0.8 286,675 - AO353_01320 0.57 -1.2 286,675 - AO353_01320 0.57 -1.2 286,675 - AO353_01320 0.57 +2.4 286,675 - AO353_01320 0.57 +2.1 286,675 - AO353_01320 0.57 +0.3 286,675 - AO353_01320 0.57 -1.8 286,675 - AO353_01320 0.57 -2.5 286,675 - AO353_01320 0.57 -0.6 286,675 - AO353_01320 0.57 +2.0 286,675 - AO353_01320 0.57 +2.4 286,675 - AO353_01320 0.57 +2.4 286,675 - AO353_01320 0.57 +1.3 286,675 - AO353_01320 0.57 -3.3 286,675 - AO353_01320 0.57 -1.2 286,675 - AO353_01320 0.57 -0.2 286,675 - AO353_01320 0.57 +1.6 286,675 - AO353_01320 0.57 +1.4 286,675 - AO353_01320 0.57 +0.5 286,675 - AO353_01320 0.57 +3.9 286,675 - AO353_01320 0.57 -1.8 286,675 - AO353_01320 0.57 -0.2 286,675 - AO353_01320 0.57 -0.2 286,678 + AO353_01320 0.58 -0.2 286,678 + AO353_01320 0.58 -1.8 286,678 + AO353_01320 0.58 -0.2 286,678 + AO353_01320 0.58 +0.3 286,678 + AO353_01320 0.58 +0.3 286,679 - AO353_01320 0.58 -1.2 286,679 - AO353_01320 0.58 +1.2 286,679 - AO353_01320 0.58 -1.2 286,749 + AO353_01320 0.64 -2.8 286,749 + AO353_01320 0.64 +0.8 286,750 - AO353_01320 0.64 -1.2 286,750 - AO353_01320 0.64 -0.6 286,942 + AO353_01320 0.81 -1.8 287,023 - AO353_01320 0.88 -0.2 287,023 - AO353_01320 0.88 -1.2 287,095 - -0.5 287,095 - -0.2 287,110 + -2.2 287,111 - -2.2 287,111 - -1.2 287,111 - -1.2 287,177 + -2.5 287,178 - -2.2 287,178 - +0.4 287,178 - -1.8 287,178 - +0.8 287,227 + +1.1 287,228 - +0.8 287,228 - +1.4 287,237 + +2.8 287,237 + +0.4 287,237 + -1.8 287,238 - -2.8 287,238 - +1.8 287,238 - -0.2 287,238 - -3.0 287,287 + -1.0 287,287 + +1.2 287,288 - -0.2 287,302 + +2.2 287,303 - -0.6 287,313 + +2.4 287,313 + +1.8 287,313 + +2.4 287,314 - +2.3 287,319 + -1.8 287,319 + -0.2 287,319 + -0.2 287,320 - -2.2 287,320 - +1.2 287,445 + +1.4 287,446 - -1.2 287,469 - -1.2 287,469 - +2.2 287,516 + AO353_01325 0.15 +1.6 287,517 - AO353_01325 0.15 -1.3 287,562 - AO353_01325 0.21 -2.5 287,562 - AO353_01325 0.21 -1.2 287,664 + AO353_01325 0.34 -0.2 287,664 + AO353_01325 0.34 -0.2 287,665 - AO353_01325 0.34 -1.2 287,666 + AO353_01325 0.34 -1.8 287,667 - AO353_01325 0.34 +0.8 287,667 - AO353_01325 0.34 -0.6 287,769 + AO353_01325 0.47 -0.2 287,879 + AO353_01325 0.61 -0.9 287,879 + AO353_01325 0.61 +2.4 287,885 + AO353_01325 0.62 -2.5 287,886 - AO353_01325 0.62 +0.8 288,018 - AO353_01325 0.79 +0.8
Or see this region's nucleotide sequence