Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00715 and AO353_00720 are separated by 256 nucleotides AO353_00720 and AO353_00725 are separated by 2 nucleotides AO353_00725 and AO353_00730 are separated by 265 nucleotides
AO353_00715: AO353_00715 - cell division protein ZipA, at 153,338 to 154,186
_00715
AO353_00720: AO353_00720 - chromosome segregation protein SMC, at 154,443 to 157,931
_00720
AO353_00725: AO353_00725 - GntR family transcriptional regulator, at 157,934 to 158,593
_00725
AO353_00730: AO353_00730 - FAD-binding molybdopterin dehydrogenase, at 158,859 to 160,313
_00730
Position (kb) 154
155
156
157
158 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 154.222 kb on - strand at 154.250 kb on - strand at 154.314 kb on - strand at 154.314 kb on - strand at 154.334 kb on - strand at 154.340 kb on - strand at 154.340 kb on - strand at 154.340 kb on - strand at 154.370 kb on - strand at 154.370 kb on - strand at 154.422 kb on - strand at 154.422 kb on - strand at 154.422 kb on - strand at 154.431 kb on - strand at 154.569 kb on - strand at 154.569 kb on - strand at 154.571 kb on - strand at 154.571 kb on - strand at 154.571 kb on - strand at 154.571 kb on - strand at 154.571 kb on - strand at 154.571 kb on - strand at 154.571 kb on - strand at 154.571 kb on - strand at 154.571 kb on - strand at 154.571 kb on - strand at 154.743 kb on + strand at 154.743 kb on + strand at 154.744 kb on - strand at 154.806 kb on + strand, within AO353_00720 at 154.806 kb on + strand, within AO353_00720 at 154.807 kb on - strand, within AO353_00720 at 154.831 kb on + strand, within AO353_00720 at 154.831 kb on + strand, within AO353_00720 at 154.832 kb on - strand, within AO353_00720 at 154.832 kb on - strand, within AO353_00720 at 154.832 kb on - strand, within AO353_00720 at 154.832 kb on - strand, within AO353_00720 at 154.898 kb on + strand, within AO353_00720 at 154.898 kb on + strand, within AO353_00720 at 154.898 kb on + strand, within AO353_00720 at 154.899 kb on - strand, within AO353_00720 at 154.899 kb on - strand, within AO353_00720 at 155.023 kb on + strand, within AO353_00720 at 155.024 kb on - strand, within AO353_00720 at 155.423 kb on + strand, within AO353_00720 at 155.423 kb on + strand, within AO353_00720 at 155.424 kb on - strand, within AO353_00720 at 155.555 kb on + strand at 155.760 kb on + strand, within AO353_00720 at 155.760 kb on + strand, within AO353_00720 at 155.761 kb on - strand, within AO353_00720 at 155.761 kb on - strand, within AO353_00720 at 156.881 kb on + strand, within AO353_00720 at 156.882 kb on - strand, within AO353_00720 at 157.051 kb on + strand, within AO353_00720 at 157.051 kb on + strand, within AO353_00720 at 157.052 kb on - strand, within AO353_00720 at 157.052 kb on - strand, within AO353_00720 at 157.270 kb on + strand, within AO353_00720 at 157.270 kb on + strand, within AO353_00720 at 157.279 kb on + strand, within AO353_00720 at 157.279 kb on + strand, within AO353_00720 at 157.279 kb on + strand, within AO353_00720 at 157.279 kb on + strand, within AO353_00720 at 157.414 kb on + strand, within AO353_00720 at 157.414 kb on + strand, within AO353_00720 at 157.414 kb on + strand, within AO353_00720 at 157.414 kb on + strand, within AO353_00720 at 157.415 kb on - strand, within AO353_00720 at 157.415 kb on - strand, within AO353_00720 at 157.415 kb on - strand, within AO353_00720 at 157.510 kb on + strand, within AO353_00720 at 157.510 kb on + strand, within AO353_00720 at 157.585 kb on + strand at 157.585 kb on + strand at 157.585 kb on + strand at 157.586 kb on - strand at 157.588 kb on + strand at 157.588 kb on + strand at 157.588 kb on + strand at 157.588 kb on + strand at 157.588 kb on + strand at 157.588 kb on + strand at 157.588 kb on + strand at 157.588 kb on + strand at 157.589 kb on - strand at 157.589 kb on - strand at 157.589 kb on - strand at 157.589 kb on - strand at 157.589 kb on - strand at 157.589 kb on - strand at 157.589 kb on - strand at 157.589 kb on - strand at 157.589 kb on - strand at 157.589 kb on - strand at 157.589 kb on - strand at 157.589 kb on - strand at 157.589 kb on - strand at 157.589 kb on - strand at 157.649 kb on - strand at 157.649 kb on - strand at 157.724 kb on + strand at 157.725 kb on - strand at 157.859 kb on + strand at 157.859 kb on + strand at 157.983 kb on + strand at 157.983 kb on + strand at 157.984 kb on - strand at 157.984 kb on - strand at 158.103 kb on + strand, within AO353_00725 at 158.151 kb on + strand, within AO353_00725 at 158.151 kb on + strand, within AO353_00725 at 158.151 kb on + strand, within AO353_00725 at 158.152 kb on - strand, within AO353_00725 at 158.152 kb on - strand, within AO353_00725 at 158.152 kb on - strand, within AO353_00725 at 158.158 kb on + strand, within AO353_00725 at 158.232 kb on + strand, within AO353_00725 at 158.232 kb on + strand, within AO353_00725 at 158.232 kb on + strand, within AO353_00725 at 158.233 kb on - strand, within AO353_00725 at 158.325 kb on + strand at 158.325 kb on + strand, within AO353_00725 at 158.325 kb on + strand, within AO353_00725 at 158.325 kb on + strand at 158.325 kb on + strand, within AO353_00725 at 158.325 kb on + strand, within AO353_00725 at 158.325 kb on + strand, within AO353_00725 at 158.325 kb on + strand, within AO353_00725 at 158.325 kb on + strand, within AO353_00725 at 158.325 kb on + strand, within AO353_00725 at 158.325 kb on + strand, within AO353_00725 at 158.325 kb on + strand, within AO353_00725 at 158.325 kb on + strand, within AO353_00725 at 158.326 kb on - strand, within AO353_00725 at 158.326 kb on - strand, within AO353_00725 at 158.326 kb on - strand, within AO353_00725 at 158.326 kb on - strand, within AO353_00725 at 158.326 kb on - strand, within AO353_00725 at 158.621 kb on - strand at 158.637 kb on - strand at 158.707 kb on + strand at 158.707 kb on + strand at 158.708 kb on - strand at 158.708 kb on - strand at 158.708 kb on - strand at 158.732 kb on + strand at 158.732 kb on + strand at 158.732 kb on + strand at 158.732 kb on + strand at 158.732 kb on + strand at 158.732 kb on + strand at 158.732 kb on + strand at 158.732 kb on + strand at 158.732 kb on + strand at 158.733 kb on - strand at 158.733 kb on - strand at 158.733 kb on - strand at 158.733 kb on - strand at 158.733 kb on - strand at 158.733 kb on - strand at 158.733 kb on - strand at 158.758 kb on + strand at 158.758 kb on + strand at 158.772 kb on + strand at 158.772 kb on + strand at 158.772 kb on + strand at 158.773 kb on - strand at 158.773 kb on - strand at 158.810 kb on - strand at 158.837 kb on + strand at 158.838 kb on - strand at 158.872 kb on + strand at 158.872 kb on + strand at 158.876 kb on + strand at 158.877 kb on - strand at 158.877 kb on - strand at 158.931 kb on + strand at 158.931 kb on + strand at 158.931 kb on + strand at 158.931 kb on + strand at 158.931 kb on + strand at 158.931 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 154,222 - -0.1 154,250 - -0.1 154,314 - -0.1 154,314 - -2.0 154,334 - -0.1 154,340 - +2.2 154,340 - -0.1 154,340 - -3.0 154,370 - -1.7 154,370 - -2.1 154,422 - -2.7 154,422 - -2.1 154,422 - -0.1 154,431 - -3.3 154,569 - -1.7 154,569 - -1.7 154,571 - -1.7 154,571 - -2.5 154,571 - -2.5 154,571 - -0.1 154,571 - -0.7 154,571 - -0.1 154,571 - -3.1 154,571 - -0.1 154,571 - -1.1 154,571 - -2.5 154,743 + -3.8 154,743 + -1.7 154,744 - -1.3 154,806 + AO353_00720 0.10 -1.7 154,806 + AO353_00720 0.10 -1.1 154,807 - AO353_00720 0.10 -2.7 154,831 + AO353_00720 0.11 -0.1 154,831 + AO353_00720 0.11 -1.1 154,832 - AO353_00720 0.11 -0.1 154,832 - AO353_00720 0.11 -2.1 154,832 - AO353_00720 0.11 +0.9 154,832 - AO353_00720 0.11 -1.7 154,898 + AO353_00720 0.13 -1.1 154,898 + AO353_00720 0.13 -2.5 154,898 + AO353_00720 0.13 -1.7 154,899 - AO353_00720 0.13 -1.1 154,899 - AO353_00720 0.13 -1.7 155,023 + AO353_00720 0.17 -0.1 155,024 - AO353_00720 0.17 -0.1 155,423 + AO353_00720 0.28 -2.1 155,423 + AO353_00720 0.28 -0.8 155,424 - AO353_00720 0.28 -0.1 155,555 + -1.1 155,760 + AO353_00720 0.38 -2.7 155,760 + AO353_00720 0.38 -1.5 155,761 - AO353_00720 0.38 -2.5 155,761 - AO353_00720 0.38 -1.7 156,881 + AO353_00720 0.70 -3.0 156,882 - AO353_00720 0.70 -2.5 157,051 + AO353_00720 0.75 +0.2 157,051 + AO353_00720 0.75 -0.8 157,052 - AO353_00720 0.75 -0.1 157,052 - AO353_00720 0.75 +1.4 157,270 + AO353_00720 0.81 -1.1 157,270 + AO353_00720 0.81 -1.1 157,279 + AO353_00720 0.81 -3.0 157,279 + AO353_00720 0.81 +0.3 157,279 + AO353_00720 0.81 -1.7 157,279 + AO353_00720 0.81 +0.2 157,414 + AO353_00720 0.85 -1.7 157,414 + AO353_00720 0.85 -1.1 157,414 + AO353_00720 0.85 -1.1 157,414 + AO353_00720 0.85 -0.1 157,415 - AO353_00720 0.85 -0.7 157,415 - AO353_00720 0.85 -2.1 157,415 - AO353_00720 0.85 -0.1 157,510 + AO353_00720 0.88 -0.1 157,510 + AO353_00720 0.88 -2.5 157,585 + -0.1 157,585 + -1.1 157,585 + -2.5 157,586 - +0.2 157,588 + -1.7 157,588 + -1.7 157,588 + -2.3 157,588 + -1.1 157,588 + -3.1 157,588 + -1.1 157,588 + -2.5 157,588 + -0.9 157,589 - -1.7 157,589 - -0.1 157,589 - -2.1 157,589 - -0.1 157,589 - -1.1 157,589 - +0.4 157,589 - -2.1 157,589 - -2.1 157,589 - +0.1 157,589 - +0.5 157,589 - -1.1 157,589 - -0.7 157,589 - -1.1 157,589 - -2.7 157,649 - -1.1 157,649 - +0.9 157,724 + -1.7 157,725 - +1.4 157,859 + -0.1 157,859 + -1.1 157,983 + -2.1 157,983 + -2.0 157,984 - -1.1 157,984 - +0.9 158,103 + AO353_00725 0.26 -0.1 158,151 + AO353_00725 0.33 +2.0 158,151 + AO353_00725 0.33 +1.1 158,151 + AO353_00725 0.33 +2.2 158,152 - AO353_00725 0.33 +1.1 158,152 - AO353_00725 0.33 -0.1 158,152 - AO353_00725 0.33 +1.9 158,158 + AO353_00725 0.34 -1.7 158,232 + AO353_00725 0.45 -1.1 158,232 + AO353_00725 0.45 -1.1 158,232 + AO353_00725 0.45 +0.6 158,233 - AO353_00725 0.45 +1.2 158,325 + -0.1 158,325 + AO353_00725 0.59 -1.1 158,325 + AO353_00725 0.59 -2.7 158,325 + -1.1 158,325 + AO353_00725 0.59 -0.7 158,325 + AO353_00725 0.59 -2.7 158,325 + AO353_00725 0.59 -1.7 158,325 + AO353_00725 0.59 -1.1 158,325 + AO353_00725 0.59 -1.7 158,325 + AO353_00725 0.59 -0.4 158,325 + AO353_00725 0.59 -0.6 158,325 + AO353_00725 0.59 -1.8 158,325 + AO353_00725 0.59 -1.7 158,326 - AO353_00725 0.59 +0.9 158,326 - AO353_00725 0.59 -0.1 158,326 - AO353_00725 0.59 -1.1 158,326 - AO353_00725 0.59 +1.2 158,326 - AO353_00725 0.59 -1.7 158,621 - +1.0 158,637 - +1.9 158,707 + +1.4 158,707 + -0.1 158,708 - -0.1 158,708 - +1.4 158,708 - +0.7 158,732 + -1.1 158,732 + -1.7 158,732 + -0.1 158,732 + +0.3 158,732 + -2.0 158,732 + -0.1 158,732 + -0.1 158,732 + -0.1 158,732 + +1.4 158,733 - +0.7 158,733 - -0.1 158,733 - -0.7 158,733 - +2.0 158,733 - +0.7 158,733 - -0.1 158,733 - -1.1 158,758 + +0.4 158,758 + -2.6 158,772 + -1.1 158,772 + -1.7 158,772 + -0.6 158,773 - -0.1 158,773 - -0.1 158,810 - -3.1 158,837 + -3.0 158,838 - +1.7 158,872 + -1.1 158,872 + +0.0 158,876 + -0.1 158,877 - +1.1 158,877 - -1.1 158,931 + +3.4 158,931 + +0.6 158,931 + -2.1 158,931 + +2.0 158,931 + -1.3 158,931 + -1.1
Or see this region's nucleotide sequence