Experiment: Cisplatin 0.006 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00005 and AO353_00010 are separated by 37 nucleotides
AO353_00005: AO353_00005 - isoprenylcysteine carboxyl methyltransferase, at 379 to 1,038
_00005
AO353_00010: AO353_00010 - hypothetical protein, at 1,076 to 2,173
_00010
Position (kb) 0
1
2 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 0.324 kb on - strand at 0.324 kb on - strand at 0.347 kb on + strand at 0.347 kb on + strand at 0.347 kb on + strand at 0.347 kb on + strand at 0.347 kb on + strand at 0.347 kb on + strand at 0.347 kb on + strand at 0.347 kb on + strand at 0.347 kb on + strand at 0.347 kb on + strand at 0.347 kb on + strand at 0.347 kb on + strand at 0.347 kb on + strand at 0.347 kb on + strand at 0.347 kb on + strand at 0.347 kb on + strand at 0.347 kb on + strand at 0.347 kb on + strand at 0.347 kb on + strand at 0.347 kb on + strand at 0.347 kb on + strand at 0.348 kb on - strand at 0.348 kb on - strand at 0.348 kb on - strand at 0.348 kb on - strand at 0.348 kb on - strand at 0.348 kb on - strand at 0.348 kb on - strand at 0.348 kb on - strand at 0.348 kb on - strand at 0.348 kb on - strand at 0.348 kb on - strand at 0.348 kb on - strand at 0.348 kb on - strand at 0.348 kb on - strand at 0.349 kb on + strand at 0.349 kb on + strand at 0.349 kb on + strand at 0.349 kb on + strand at 0.349 kb on + strand at 0.349 kb on + strand at 0.349 kb on + strand at 0.349 kb on + strand at 0.349 kb on + strand at 0.349 kb on + strand at 0.349 kb on + strand at 0.349 kb on + strand at 0.349 kb on + strand at 0.349 kb on + strand at 0.350 kb on - strand at 0.351 kb on + strand at 0.351 kb on + strand at 0.351 kb on + strand at 0.351 kb on + strand at 0.351 kb on + strand at 0.352 kb on - strand at 0.352 kb on - strand at 0.352 kb on - strand at 0.352 kb on - strand at 0.352 kb on - strand at 0.430 kb on + strand at 0.430 kb on + strand at 0.430 kb on + strand at 0.430 kb on + strand at 0.431 kb on - strand at 0.431 kb on - strand at 0.566 kb on + strand, within AO353_00005 at 0.602 kb on + strand, within AO353_00005 at 0.603 kb on - strand, within AO353_00005 at 0.603 kb on - strand, within AO353_00005 at 0.643 kb on + strand, within AO353_00005 at 0.686 kb on + strand, within AO353_00005 at 0.686 kb on + strand, within AO353_00005 at 0.686 kb on + strand, within AO353_00005 at 0.686 kb on + strand, within AO353_00005 at 0.686 kb on + strand, within AO353_00005 at 0.687 kb on - strand, within AO353_00005 at 0.687 kb on - strand, within AO353_00005 at 0.687 kb on - strand, within AO353_00005 at 0.687 kb on - strand, within AO353_00005 at 0.707 kb on + strand, within AO353_00005 at 0.707 kb on + strand, within AO353_00005 at 0.708 kb on - strand, within AO353_00005 at 0.708 kb on - strand, within AO353_00005 at 0.750 kb on - strand, within AO353_00005 at 0.795 kb on + strand, within AO353_00005 at 0.795 kb on + strand, within AO353_00005 at 0.795 kb on + strand, within AO353_00005 at 0.796 kb on - strand, within AO353_00005 at 0.796 kb on - strand, within AO353_00005 at 0.813 kb on + strand, within AO353_00005 at 0.817 kb on + strand, within AO353_00005 at 0.818 kb on - strand, within AO353_00005 at 0.842 kb on - strand, within AO353_00005 at 0.851 kb on + strand, within AO353_00005 at 0.851 kb on + strand, within AO353_00005 at 0.852 kb on - strand, within AO353_00005 at 0.945 kb on - strand, within AO353_00005 at 0.989 kb on - strand at 0.997 kb on + strand at 0.997 kb on + strand at 0.997 kb on + strand at 0.997 kb on + strand at 0.997 kb on + strand at 0.998 kb on - strand at 0.998 kb on - strand at 0.998 kb on - strand at 0.998 kb on - strand at 1.033 kb on + strand at 1.033 kb on + strand at 1.071 kb on + strand at 1.071 kb on + strand at 1.071 kb on + strand at 1.072 kb on - strand at 1.072 kb on - strand at 1.072 kb on - strand at 1.078 kb on - strand at 1.249 kb on + strand, within AO353_00010 at 1.249 kb on + strand, within AO353_00010 at 1.249 kb on + strand, within AO353_00010 at 1.249 kb on + strand, within AO353_00010 at 1.249 kb on + strand, within AO353_00010 at 1.249 kb on + strand, within AO353_00010 at 1.249 kb on + strand, within AO353_00010 at 1.249 kb on + strand, within AO353_00010 at 1.249 kb on + strand, within AO353_00010 at 1.249 kb on + strand, within AO353_00010 at 1.249 kb on + strand, within AO353_00010 at 1.249 kb on + strand, within AO353_00010 at 1.249 kb on + strand, within AO353_00010 at 1.249 kb on + strand, within AO353_00010 at 1.249 kb on + strand, within AO353_00010 at 1.249 kb on + strand, within AO353_00010 at 1.249 kb on + strand, within AO353_00010 at 1.249 kb on + strand, within AO353_00010 at 1.249 kb on + strand, within AO353_00010 at 1.249 kb on + strand, within AO353_00010 at 1.249 kb on + strand, within AO353_00010 at 1.249 kb on + strand, within AO353_00010 at 1.249 kb on + strand, within AO353_00010 at 1.250 kb on - strand, within AO353_00010 at 1.250 kb on - strand, within AO353_00010 at 1.250 kb on - strand, within AO353_00010 at 1.250 kb on - strand, within AO353_00010 at 1.250 kb on - strand, within AO353_00010 at 1.250 kb on - strand, within AO353_00010 at 1.250 kb on - strand, within AO353_00010 at 1.250 kb on - strand, within AO353_00010 at 1.250 kb on - strand, within AO353_00010 at 1.250 kb on - strand, within AO353_00010 at 1.250 kb on - strand, within AO353_00010 at 1.250 kb on - strand, within AO353_00010 at 1.250 kb on - strand, within AO353_00010 at 1.250 kb on - strand, within AO353_00010 at 1.250 kb on - strand, within AO353_00010 at 1.250 kb on - strand, within AO353_00010 at 1.250 kb on - strand, within AO353_00010 at 1.250 kb on - strand, within AO353_00010 at 1.250 kb on - strand, within AO353_00010 at 1.250 kb on - strand, within AO353_00010 at 1.250 kb on - strand, within AO353_00010 at 1.250 kb on - strand, within AO353_00010 at 1.250 kb on - strand, within AO353_00010 at 1.251 kb on + strand, within AO353_00010 at 1.251 kb on + strand, within AO353_00010 at 1.251 kb on + strand, within AO353_00010 at 1.251 kb on + strand, within AO353_00010 at 1.251 kb on + strand, within AO353_00010 at 1.252 kb on - strand, within AO353_00010 at 1.252 kb on - strand, within AO353_00010 at 1.252 kb on - strand, within AO353_00010 at 1.252 kb on - strand, within AO353_00010 at 1.253 kb on + strand, within AO353_00010 at 1.253 kb on + strand, within AO353_00010 at 1.253 kb on + strand, within AO353_00010 at 1.253 kb on + strand, within AO353_00010 at 1.253 kb on + strand, within AO353_00010 at 1.254 kb on - strand, within AO353_00010 at 1.254 kb on - strand, within AO353_00010 at 1.254 kb on - strand, within AO353_00010 at 1.254 kb on - strand, within AO353_00010 at 1.254 kb on - strand, within AO353_00010 at 1.254 kb on - strand, within AO353_00010 at 1.254 kb on - strand, within AO353_00010 at 1.254 kb on - strand, within AO353_00010 at 1.254 kb on - strand, within AO353_00010 at 1.312 kb on + strand, within AO353_00010 at 1.312 kb on + strand, within AO353_00010 at 1.312 kb on + strand, within AO353_00010 at 1.313 kb on - strand, within AO353_00010 at 1.497 kb on + strand, within AO353_00010 at 1.498 kb on - strand, within AO353_00010 at 1.512 kb on + strand, within AO353_00010 at 1.512 kb on + strand, within AO353_00010 at 1.513 kb on - strand, within AO353_00010 at 1.513 kb on - strand, within AO353_00010 at 1.513 kb on - strand, within AO353_00010 at 1.540 kb on + strand, within AO353_00010 at 1.541 kb on - strand, within AO353_00010 at 1.541 kb on - strand, within AO353_00010 at 1.541 kb on - strand, within AO353_00010 at 1.541 kb on - strand, within AO353_00010 at 1.551 kb on + strand, within AO353_00010 at 1.551 kb on + strand, within AO353_00010 at 1.551 kb on + strand, within AO353_00010 at 1.551 kb on + strand, within AO353_00010 at 1.551 kb on + strand, within AO353_00010 at 1.552 kb on - strand, within AO353_00010 at 1.552 kb on - strand, within AO353_00010 at 1.552 kb on - strand, within AO353_00010 at 1.552 kb on - strand, within AO353_00010 at 1.552 kb on - strand, within AO353_00010 at 1.552 kb on - strand, within AO353_00010 at 1.612 kb on - strand, within AO353_00010 at 1.666 kb on + strand, within AO353_00010 at 1.666 kb on + strand, within AO353_00010 at 1.688 kb on - strand, within AO353_00010 at 1.688 kb on - strand, within AO353_00010 at 2.001 kb on + strand, within AO353_00010 at 2.001 kb on + strand, within AO353_00010 at 2.001 kb on + strand, within AO353_00010 at 2.001 kb on + strand, within AO353_00010 at 2.001 kb on + strand, within AO353_00010 at 2.001 kb on + strand, within AO353_00010 at 2.001 kb on + strand, within AO353_00010 at 2.001 kb on + strand, within AO353_00010 at 2.001 kb on + strand, within AO353_00010 at 2.001 kb on + strand, within AO353_00010 at 2.001 kb on + strand, within AO353_00010 at 2.001 kb on + strand, within AO353_00010 at 2.002 kb on - strand, within AO353_00010 at 2.002 kb on - strand, within AO353_00010 at 2.002 kb on - strand, within AO353_00010 at 2.002 kb on - strand, within AO353_00010 at 2.002 kb on - strand, within AO353_00010
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.006 mg/ml remove 324 - -1.7 324 - +1.3 347 + -1.1 347 + -1.1 347 + -0.1 347 + -2.1 347 + +1.4 347 + -0.1 347 + -3.1 347 + +2.2 347 + -2.5 347 + +1.2 347 + -0.1 347 + +0.4 347 + +0.9 347 + +0.9 347 + +2.3 347 + +0.9 347 + -0.4 347 + +0.9 347 + -0.6 347 + +0.2 347 + +1.9 348 - +0.7 348 - +2.4 348 - -3.0 348 - -1.1 348 - -1.1 348 - -2.7 348 - +1.2 348 - -1.1 348 - -2.1 348 - -0.1 348 - -0.1 348 - -0.7 348 - -1.1 348 - -2.5 349 + -0.1 349 + -0.1 349 + +0.1 349 + +0.9 349 + -3.3 349 + -0.1 349 + -2.1 349 + +1.2 349 + +0.3 349 + -1.7 349 + -0.1 349 + +0.2 349 + +0.4 349 + -1.1 350 - +1.2 351 + -1.1 351 + +2.1 351 + -0.5 351 + -1.5 351 + -0.9 352 - -1.1 352 - +1.4 352 - -0.1 352 - -0.1 352 - +1.7 430 + +0.1 430 + -2.5 430 + -1.1 430 + -1.1 431 - -1.1 431 - -1.9 566 + AO353_00005 0.28 -1.7 602 + AO353_00005 0.34 +0.3 603 - AO353_00005 0.34 -1.1 603 - AO353_00005 0.34 +1.9 643 + AO353_00005 0.40 -2.1 686 + AO353_00005 0.47 -0.6 686 + AO353_00005 0.47 +1.4 686 + AO353_00005 0.47 -1.1 686 + AO353_00005 0.47 -1.7 686 + AO353_00005 0.47 +0.7 687 - AO353_00005 0.47 +1.2 687 - AO353_00005 0.47 -0.1 687 - AO353_00005 0.47 -0.1 687 - AO353_00005 0.47 -1.3 707 + AO353_00005 0.50 -1.7 707 + AO353_00005 0.50 -1.1 708 - AO353_00005 0.50 -2.1 708 - AO353_00005 0.50 +0.5 750 - AO353_00005 0.56 +1.9 795 + AO353_00005 0.63 -1.1 795 + AO353_00005 0.63 -2.7 795 + AO353_00005 0.63 -1.7 796 - AO353_00005 0.63 -0.1 796 - AO353_00005 0.63 -2.1 813 + AO353_00005 0.66 -1.1 817 + AO353_00005 0.66 -0.1 818 - AO353_00005 0.67 -1.7 842 - AO353_00005 0.70 +1.4 851 + AO353_00005 0.72 -0.1 851 + AO353_00005 0.72 -1.1 852 - AO353_00005 0.72 -2.1 945 - AO353_00005 0.86 +2.9 989 - -0.1 997 + -1.1 997 + -0.1 997 + -0.1 997 + +1.9 997 + -0.1 998 - -1.1 998 - -2.1 998 - -1.1 998 - -0.1 1,033 + -0.9 1,033 + -1.1 1,071 + -0.7 1,071 + +2.7 1,071 + -2.1 1,072 - +0.2 1,072 - -1.7 1,072 - -1.1 1,078 - -1.7 1,249 + AO353_00010 0.16 +0.1 1,249 + AO353_00010 0.16 +0.4 1,249 + AO353_00010 0.16 -2.5 1,249 + AO353_00010 0.16 -1.1 1,249 + AO353_00010 0.16 -0.1 1,249 + AO353_00010 0.16 +1.4 1,249 + AO353_00010 0.16 -1.1 1,249 + AO353_00010 0.16 -1.4 1,249 + AO353_00010 0.16 -1.7 1,249 + AO353_00010 0.16 -0.1 1,249 + AO353_00010 0.16 -0.8 1,249 + AO353_00010 0.16 -1.7 1,249 + AO353_00010 0.16 -1.1 1,249 + AO353_00010 0.16 -2.0 1,249 + AO353_00010 0.16 -1.0 1,249 + AO353_00010 0.16 +2.8 1,249 + AO353_00010 0.16 +1.7 1,249 + AO353_00010 0.16 -2.5 1,249 + AO353_00010 0.16 +1.7 1,249 + AO353_00010 0.16 -2.7 1,249 + AO353_00010 0.16 -2.7 1,249 + AO353_00010 0.16 -1.1 1,249 + AO353_00010 0.16 +2.0 1,250 - AO353_00010 0.16 +0.4 1,250 - AO353_00010 0.16 -1.1 1,250 - AO353_00010 0.16 +2.4 1,250 - AO353_00010 0.16 -2.5 1,250 - AO353_00010 0.16 +0.4 1,250 - AO353_00010 0.16 -1.1 1,250 - AO353_00010 0.16 +2.3 1,250 - AO353_00010 0.16 +3.9 1,250 - AO353_00010 0.16 -0.1 1,250 - AO353_00010 0.16 +0.8 1,250 - AO353_00010 0.16 -1.7 1,250 - AO353_00010 0.16 -1.1 1,250 - AO353_00010 0.16 -1.1 1,250 - AO353_00010 0.16 +0.4 1,250 - AO353_00010 0.16 -2.1 1,250 - AO353_00010 0.16 -0.1 1,250 - AO353_00010 0.16 +0.4 1,250 - AO353_00010 0.16 +0.4 1,250 - AO353_00010 0.16 -0.1 1,250 - AO353_00010 0.16 -0.6 1,250 - AO353_00010 0.16 -1.7 1,250 - AO353_00010 0.16 -0.1 1,250 - AO353_00010 0.16 -1.1 1,251 + AO353_00010 0.16 -1.7 1,251 + AO353_00010 0.16 -1.0 1,251 + AO353_00010 0.16 -1.7 1,251 + AO353_00010 0.16 +1.1 1,251 + AO353_00010 0.16 +0.9 1,252 - AO353_00010 0.16 -1.1 1,252 - AO353_00010 0.16 +1.5 1,252 - AO353_00010 0.16 +1.3 1,252 - AO353_00010 0.16 -1.1 1,253 + AO353_00010 0.16 +1.9 1,253 + AO353_00010 0.16 +0.4 1,253 + AO353_00010 0.16 +0.9 1,253 + AO353_00010 0.16 -3.3 1,253 + AO353_00010 0.16 -0.1 1,254 - AO353_00010 0.16 -2.5 1,254 - AO353_00010 0.16 -2.1 1,254 - AO353_00010 0.16 -1.1 1,254 - AO353_00010 0.16 +0.3 1,254 - AO353_00010 0.16 +1.3 1,254 - AO353_00010 0.16 +0.4 1,254 - AO353_00010 0.16 -0.1 1,254 - AO353_00010 0.16 -2.5 1,254 - AO353_00010 0.16 -0.6 1,312 + AO353_00010 0.21 +1.4 1,312 + AO353_00010 0.21 +1.7 1,312 + AO353_00010 0.21 -0.5 1,313 - AO353_00010 0.22 -1.7 1,497 + AO353_00010 0.38 +0.9 1,498 - AO353_00010 0.38 +1.9 1,512 + AO353_00010 0.40 -0.1 1,512 + AO353_00010 0.40 +1.6 1,513 - AO353_00010 0.40 -1.1 1,513 - AO353_00010 0.40 +0.9 1,513 - AO353_00010 0.40 -0.1 1,540 + AO353_00010 0.42 +0.2 1,541 - AO353_00010 0.42 -0.1 1,541 - AO353_00010 0.42 -2.3 1,541 - AO353_00010 0.42 +1.9 1,541 - AO353_00010 0.42 +1.9 1,551 + AO353_00010 0.43 -1.9 1,551 + AO353_00010 0.43 +0.3 1,551 + AO353_00010 0.43 +3.3 1,551 + AO353_00010 0.43 -1.1 1,551 + AO353_00010 0.43 +1.4 1,552 - AO353_00010 0.43 -1.1 1,552 - AO353_00010 0.43 -0.6 1,552 - AO353_00010 0.43 +2.0 1,552 - AO353_00010 0.43 -0.1 1,552 - AO353_00010 0.43 -0.1 1,552 - AO353_00010 0.43 +0.4 1,612 - AO353_00010 0.49 -1.7 1,666 + AO353_00010 0.54 -1.7 1,666 + AO353_00010 0.54 -1.1 1,688 - AO353_00010 0.56 -1.7 1,688 - AO353_00010 0.56 -0.6 2,001 + AO353_00010 0.84 +3.6 2,001 + AO353_00010 0.84 +1.9 2,001 + AO353_00010 0.84 -1.7 2,001 + AO353_00010 0.84 -2.7 2,001 + AO353_00010 0.84 -1.7 2,001 + AO353_00010 0.84 -1.5 2,001 + AO353_00010 0.84 +2.2 2,001 + AO353_00010 0.84 -1.1 2,001 + AO353_00010 0.84 -2.1 2,001 + AO353_00010 0.84 +2.6 2,001 + AO353_00010 0.84 -0.1 2,001 + AO353_00010 0.84 +0.6 2,002 - AO353_00010 0.84 +1.9 2,002 - AO353_00010 0.84 +0.4 2,002 - AO353_00010 0.84 -1.7 2,002 - AO353_00010 0.84 +0.4 2,002 - AO353_00010 0.84 -2.1
Or see this region's nucleotide sequence