Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS20105

Experiment: D-Galactose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS20095 and ABZR86_RS20100 are separated by 41 nucleotidesABZR86_RS20100 and ABZR86_RS20105 are separated by 8 nucleotidesABZR86_RS20105 and ABZR86_RS20110 are separated by 146 nucleotides ABZR86_RS20095: ABZR86_RS20095 - flagellar basal-body rod protein FlgF, at 512,545 to 513,285 _RS20095 ABZR86_RS20100: ABZR86_RS20100 - flagellar basal-body rod protein FlgG, at 513,327 to 514,112 _RS20100 ABZR86_RS20105: ABZR86_RS20105 - flagellar basal body L-ring protein FlgH, at 514,121 to 514,807 _RS20105 ABZR86_RS20110: ABZR86_RS20110 - flagellar basal body P-ring protein FlgI, at 514,954 to 516,042 _RS20110 Position (kb) 514 515Strain fitness (log2 ratio) -2 -1 0 1at 513.208 kb on + strand, within ABZR86_RS20095at 513.463 kb on - strand, within ABZR86_RS20100at 513.463 kb on - strand, within ABZR86_RS20100at 513.667 kb on - strand, within ABZR86_RS20100at 513.669 kb on - strand, within ABZR86_RS20100at 513.901 kb on - strand, within ABZR86_RS20100at 514.045 kb on - strandat 514.724 kb on + strand, within ABZR86_RS20105at 514.724 kb on + strand, within ABZR86_RS20105at 514.835 kb on + strandat 514.836 kb on - strandat 514.836 kb on - strandat 514.924 kb on - strandat 514.939 kb on - strandat 515.514 kb on + strand, within ABZR86_RS20110

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Galactose (C)
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513,208 + ABZR86_RS20095 0.89 -0.6
513,463 - ABZR86_RS20100 0.17 +0.7
513,463 - ABZR86_RS20100 0.17 -0.3
513,667 - ABZR86_RS20100 0.43 -0.3
513,669 - ABZR86_RS20100 0.44 -0.5
513,901 - ABZR86_RS20100 0.73 -0.0
514,045 - -0.0
514,724 + ABZR86_RS20105 0.88 +0.2
514,724 + ABZR86_RS20105 0.88 +0.7
514,835 + +0.9
514,836 - -2.0
514,836 - +0.4
514,924 - +0.1
514,939 - +0.4
515,514 + ABZR86_RS20110 0.51 -0.6

Or see this region's nucleotide sequence