Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS08550 and ABZR86_RS08555 are separated by 239 nucleotides ABZR86_RS08555 and ABZR86_RS08560 are separated by 59 nucleotides ABZR86_RS08560 and ABZR86_RS08565 are separated by 165 nucleotides ABZR86_RS08565 and ABZR86_RS08570 are separated by 77 nucleotides
ABZR86_RS08550: ABZR86_RS08550 - pyridoxal phosphate-dependent aminotransferase, at 1,913,476 to 1,914,675
_RS08550
ABZR86_RS08555: ABZR86_RS08555 - GlsB/YeaQ/YmgE family stress response membrane protein, at 1,914,915 to 1,915,172
_RS08555
ABZR86_RS08560: ABZR86_RS08560 - YidB family protein, at 1,915,232 to 1,915,681
_RS08560
ABZR86_RS08565: ABZR86_RS08565 - peptidylprolyl isomerase, at 1,915,847 to 1,916,356
_RS08565
ABZR86_RS08570: ABZR86_RS08570 - 3-hydroxybutyrate oligomer hydrolase family protein, at 1,916,434 to 1,918,269
_RS08570
Position (kb)
1915
1916 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1914.293 kb on + strand, within ABZR86_RS08550 at 1914.293 kb on + strand, within ABZR86_RS08550 at 1914.294 kb on - strand, within ABZR86_RS08550 at 1914.294 kb on - strand, within ABZR86_RS08550 at 1914.294 kb on - strand, within ABZR86_RS08550 at 1914.294 kb on - strand, within ABZR86_RS08550 at 1914.362 kb on + strand, within ABZR86_RS08550 at 1914.362 kb on + strand, within ABZR86_RS08550 at 1914.362 kb on + strand, within ABZR86_RS08550 at 1914.362 kb on + strand, within ABZR86_RS08550 at 1914.363 kb on - strand, within ABZR86_RS08550 at 1914.363 kb on - strand, within ABZR86_RS08550 at 1914.363 kb on - strand, within ABZR86_RS08550 at 1914.486 kb on - strand, within ABZR86_RS08550 at 1914.527 kb on + strand, within ABZR86_RS08550 at 1914.528 kb on - strand, within ABZR86_RS08550 at 1914.528 kb on - strand, within ABZR86_RS08550 at 1914.665 kb on - strand at 1914.808 kb on + strand at 1914.875 kb on + strand at 1914.875 kb on + strand at 1914.875 kb on + strand at 1914.875 kb on + strand at 1914.887 kb on + strand at 1914.887 kb on + strand at 1914.888 kb on - strand at 1914.914 kb on + strand at 1914.914 kb on + strand at 1914.915 kb on - strand at 1914.915 kb on - strand at 1914.931 kb on + strand at 1915.047 kb on + strand, within ABZR86_RS08555 at 1915.047 kb on + strand, within ABZR86_RS08555 at 1915.047 kb on + strand, within ABZR86_RS08555 at 1915.047 kb on + strand, within ABZR86_RS08555 at 1915.047 kb on + strand, within ABZR86_RS08555 at 1915.047 kb on + strand, within ABZR86_RS08555 at 1915.047 kb on + strand, within ABZR86_RS08555 at 1915.048 kb on - strand, within ABZR86_RS08555 at 1915.048 kb on - strand, within ABZR86_RS08555 at 1915.048 kb on - strand, within ABZR86_RS08555 at 1915.048 kb on - strand, within ABZR86_RS08555 at 1915.048 kb on - strand, within ABZR86_RS08555 at 1915.048 kb on - strand, within ABZR86_RS08555 at 1915.048 kb on - strand, within ABZR86_RS08555 at 1915.138 kb on - strand, within ABZR86_RS08555 at 1915.138 kb on - strand, within ABZR86_RS08555 at 1915.138 kb on - strand, within ABZR86_RS08555 at 1915.233 kb on + strand at 1915.233 kb on + strand at 1915.234 kb on - strand at 1915.645 kb on + strand at 1915.709 kb on + strand at 1915.710 kb on - strand at 1915.746 kb on + strand at 1915.747 kb on - strand at 1915.747 kb on - strand at 1915.747 kb on - strand at 1915.824 kb on + strand at 1915.824 kb on + strand at 1915.825 kb on - strand at 1915.825 kb on - strand at 1916.154 kb on + strand, within ABZR86_RS08565 at 1916.154 kb on + strand, within ABZR86_RS08565 at 1916.241 kb on + strand, within ABZR86_RS08565 at 1916.241 kb on + strand, within ABZR86_RS08565 at 1916.241 kb on + strand, within ABZR86_RS08565 at 1916.241 kb on + strand, within ABZR86_RS08565 at 1916.241 kb on + strand, within ABZR86_RS08565 at 1916.241 kb on + strand, within ABZR86_RS08565 at 1916.241 kb on + strand, within ABZR86_RS08565 at 1916.241 kb on + strand, within ABZR86_RS08565 at 1916.242 kb on - strand, within ABZR86_RS08565 at 1916.242 kb on - strand, within ABZR86_RS08565 at 1916.242 kb on - strand, within ABZR86_RS08565 at 1916.242 kb on - strand, within ABZR86_RS08565 at 1916.242 kb on - strand, within ABZR86_RS08565 at 1916.242 kb on - strand, within ABZR86_RS08565 at 1916.242 kb on - strand, within ABZR86_RS08565 at 1916.242 kb on - strand, within ABZR86_RS08565 at 1916.342 kb on + strand at 1916.342 kb on + strand at 1916.342 kb on + strand at 1916.342 kb on + strand at 1916.343 kb on - strand at 1916.343 kb on - strand at 1916.367 kb on + strand at 1916.368 kb on - strand at 1916.368 kb on - strand at 1916.368 kb on - strand at 1916.418 kb on + strand at 1916.418 kb on + strand at 1916.418 kb on + strand at 1916.419 kb on - strand at 1916.419 kb on - strand at 1916.532 kb on - strand at 1916.564 kb on + strand at 1916.564 kb on + strand at 1916.565 kb on - strand at 1916.654 kb on + strand, within ABZR86_RS08570
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 1,914,293 + ABZR86_RS08550 0.68 +0.4 1,914,293 + ABZR86_RS08550 0.68 +1.0 1,914,294 - ABZR86_RS08550 0.68 +0.6 1,914,294 - ABZR86_RS08550 0.68 -0.9 1,914,294 - ABZR86_RS08550 0.68 +0.1 1,914,294 - ABZR86_RS08550 0.68 +0.1 1,914,362 + ABZR86_RS08550 0.74 -0.2 1,914,362 + ABZR86_RS08550 0.74 +0.4 1,914,362 + ABZR86_RS08550 0.74 +1.2 1,914,362 + ABZR86_RS08550 0.74 +1.7 1,914,363 - ABZR86_RS08550 0.74 -0.4 1,914,363 - ABZR86_RS08550 0.74 +0.5 1,914,363 - ABZR86_RS08550 0.74 -3.0 1,914,486 - ABZR86_RS08550 0.84 +0.5 1,914,527 + ABZR86_RS08550 0.88 +0.9 1,914,528 - ABZR86_RS08550 0.88 +0.2 1,914,528 - ABZR86_RS08550 0.88 +0.4 1,914,665 - +0.5 1,914,808 + +0.3 1,914,875 + +0.9 1,914,875 + -0.2 1,914,875 + -0.1 1,914,875 + +0.2 1,914,887 + -0.4 1,914,887 + -0.3 1,914,888 - +0.3 1,914,914 + -0.1 1,914,914 + +1.3 1,914,915 - +0.0 1,914,915 - -2.0 1,914,931 + -1.1 1,915,047 + ABZR86_RS08555 0.51 -0.2 1,915,047 + ABZR86_RS08555 0.51 -0.2 1,915,047 + ABZR86_RS08555 0.51 -1.3 1,915,047 + ABZR86_RS08555 0.51 -0.1 1,915,047 + ABZR86_RS08555 0.51 -0.2 1,915,047 + ABZR86_RS08555 0.51 -0.3 1,915,047 + ABZR86_RS08555 0.51 -0.6 1,915,048 - ABZR86_RS08555 0.52 -0.5 1,915,048 - ABZR86_RS08555 0.52 -0.5 1,915,048 - ABZR86_RS08555 0.52 +0.5 1,915,048 - ABZR86_RS08555 0.52 -0.1 1,915,048 - ABZR86_RS08555 0.52 +0.8 1,915,048 - ABZR86_RS08555 0.52 +1.2 1,915,048 - ABZR86_RS08555 0.52 -0.8 1,915,138 - ABZR86_RS08555 0.86 +1.0 1,915,138 - ABZR86_RS08555 0.86 +0.2 1,915,138 - ABZR86_RS08555 0.86 -1.1 1,915,233 + -0.2 1,915,233 + +0.2 1,915,234 - -0.2 1,915,645 + +0.8 1,915,709 + -0.9 1,915,710 - -0.4 1,915,746 + +0.2 1,915,747 - -0.6 1,915,747 - -0.7 1,915,747 - -0.7 1,915,824 + +0.3 1,915,824 + +1.8 1,915,825 - +0.4 1,915,825 - -0.6 1,916,154 + ABZR86_RS08565 0.60 +0.3 1,916,154 + ABZR86_RS08565 0.60 +0.6 1,916,241 + ABZR86_RS08565 0.77 -0.2 1,916,241 + ABZR86_RS08565 0.77 -0.4 1,916,241 + ABZR86_RS08565 0.77 +1.6 1,916,241 + ABZR86_RS08565 0.77 +0.3 1,916,241 + ABZR86_RS08565 0.77 -0.2 1,916,241 + ABZR86_RS08565 0.77 +0.5 1,916,241 + ABZR86_RS08565 0.77 +0.2 1,916,241 + ABZR86_RS08565 0.77 +0.6 1,916,242 - ABZR86_RS08565 0.77 +0.2 1,916,242 - ABZR86_RS08565 0.77 +0.8 1,916,242 - ABZR86_RS08565 0.77 +0.6 1,916,242 - ABZR86_RS08565 0.77 +0.3 1,916,242 - ABZR86_RS08565 0.77 +0.6 1,916,242 - ABZR86_RS08565 0.77 -0.1 1,916,242 - ABZR86_RS08565 0.77 +0.5 1,916,242 - ABZR86_RS08565 0.77 +3.0 1,916,342 + +0.2 1,916,342 + -0.5 1,916,342 + +0.6 1,916,342 + -0.2 1,916,343 - -0.2 1,916,343 - -1.7 1,916,367 + +0.2 1,916,368 - +0.7 1,916,368 - +0.4 1,916,368 - +0.1 1,916,418 + -0.8 1,916,418 + +0.5 1,916,418 + +1.3 1,916,419 - +0.4 1,916,419 - +0.0 1,916,532 - -1.8 1,916,564 + +0.2 1,916,564 + -0.1 1,916,565 - -1.4 1,916,654 + ABZR86_RS08570 0.12 -0.5
Or see this region's nucleotide sequence