Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS08545 and ABZR86_RS08550 are separated by 83 nucleotides ABZR86_RS08550 and ABZR86_RS08555 are separated by 239 nucleotides ABZR86_RS08555 and ABZR86_RS08560 are separated by 59 nucleotides
ABZR86_RS08545: ABZR86_RS08545 - malate dehydrogenase, at 1,912,406 to 1,913,392
_RS08545
ABZR86_RS08550: ABZR86_RS08550 - pyridoxal phosphate-dependent aminotransferase, at 1,913,476 to 1,914,675
_RS08550
ABZR86_RS08555: ABZR86_RS08555 - GlsB/YeaQ/YmgE family stress response membrane protein, at 1,914,915 to 1,915,172
_RS08555
ABZR86_RS08560: ABZR86_RS08560 - YidB family protein, at 1,915,232 to 1,915,681
_RS08560
Position (kb)
1913
1914
1915 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1913.546 kb on + strand at 1913.546 kb on + strand at 1913.547 kb on - strand at 1913.547 kb on - strand at 1913.547 kb on - strand at 1913.547 kb on - strand at 1913.547 kb on - strand at 1913.547 kb on - strand at 1913.689 kb on - strand, within ABZR86_RS08550 at 1913.702 kb on + strand, within ABZR86_RS08550 at 1913.703 kb on - strand, within ABZR86_RS08550 at 1913.954 kb on + strand, within ABZR86_RS08550 at 1913.954 kb on + strand, within ABZR86_RS08550 at 1913.955 kb on - strand, within ABZR86_RS08550 at 1913.955 kb on - strand, within ABZR86_RS08550 at 1913.955 kb on - strand, within ABZR86_RS08550 at 1914.026 kb on + strand, within ABZR86_RS08550 at 1914.056 kb on + strand, within ABZR86_RS08550 at 1914.056 kb on + strand, within ABZR86_RS08550 at 1914.056 kb on + strand, within ABZR86_RS08550 at 1914.057 kb on - strand, within ABZR86_RS08550 at 1914.057 kb on - strand, within ABZR86_RS08550 at 1914.057 kb on - strand, within ABZR86_RS08550 at 1914.057 kb on - strand, within ABZR86_RS08550 at 1914.089 kb on + strand, within ABZR86_RS08550 at 1914.135 kb on - strand, within ABZR86_RS08550 at 1914.135 kb on - strand, within ABZR86_RS08550 at 1914.135 kb on - strand, within ABZR86_RS08550 at 1914.228 kb on - strand, within ABZR86_RS08550 at 1914.228 kb on - strand, within ABZR86_RS08550 at 1914.228 kb on - strand, within ABZR86_RS08550 at 1914.228 kb on - strand, within ABZR86_RS08550 at 1914.228 kb on - strand, within ABZR86_RS08550 at 1914.293 kb on + strand, within ABZR86_RS08550 at 1914.293 kb on + strand, within ABZR86_RS08550 at 1914.294 kb on - strand, within ABZR86_RS08550 at 1914.294 kb on - strand, within ABZR86_RS08550 at 1914.294 kb on - strand, within ABZR86_RS08550 at 1914.294 kb on - strand, within ABZR86_RS08550 at 1914.362 kb on + strand, within ABZR86_RS08550 at 1914.362 kb on + strand, within ABZR86_RS08550 at 1914.362 kb on + strand, within ABZR86_RS08550 at 1914.362 kb on + strand, within ABZR86_RS08550 at 1914.363 kb on - strand, within ABZR86_RS08550 at 1914.363 kb on - strand, within ABZR86_RS08550 at 1914.363 kb on - strand, within ABZR86_RS08550 at 1914.486 kb on - strand, within ABZR86_RS08550 at 1914.527 kb on + strand, within ABZR86_RS08550 at 1914.528 kb on - strand, within ABZR86_RS08550 at 1914.528 kb on - strand, within ABZR86_RS08550 at 1914.665 kb on - strand at 1914.808 kb on + strand at 1914.875 kb on + strand at 1914.875 kb on + strand at 1914.875 kb on + strand at 1914.875 kb on + strand at 1914.887 kb on + strand at 1914.887 kb on + strand at 1914.888 kb on - strand at 1914.914 kb on + strand at 1914.914 kb on + strand at 1914.915 kb on - strand at 1914.915 kb on - strand at 1914.931 kb on + strand at 1915.047 kb on + strand, within ABZR86_RS08555 at 1915.047 kb on + strand, within ABZR86_RS08555 at 1915.047 kb on + strand, within ABZR86_RS08555 at 1915.047 kb on + strand, within ABZR86_RS08555 at 1915.047 kb on + strand, within ABZR86_RS08555 at 1915.047 kb on + strand, within ABZR86_RS08555 at 1915.047 kb on + strand, within ABZR86_RS08555 at 1915.048 kb on - strand, within ABZR86_RS08555 at 1915.048 kb on - strand, within ABZR86_RS08555 at 1915.048 kb on - strand, within ABZR86_RS08555 at 1915.048 kb on - strand, within ABZR86_RS08555 at 1915.048 kb on - strand, within ABZR86_RS08555 at 1915.048 kb on - strand, within ABZR86_RS08555 at 1915.048 kb on - strand, within ABZR86_RS08555 at 1915.138 kb on - strand, within ABZR86_RS08555 at 1915.138 kb on - strand, within ABZR86_RS08555 at 1915.138 kb on - strand, within ABZR86_RS08555 at 1915.233 kb on + strand at 1915.233 kb on + strand at 1915.234 kb on - strand at 1915.645 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 1,913,546 + +0.3 1,913,546 + -0.2 1,913,547 - -0.0 1,913,547 - -2.4 1,913,547 - -0.1 1,913,547 - -0.4 1,913,547 - +0.1 1,913,547 - +1.4 1,913,689 - ABZR86_RS08550 0.18 -1.5 1,913,702 + ABZR86_RS08550 0.19 -0.4 1,913,703 - ABZR86_RS08550 0.19 -0.8 1,913,954 + ABZR86_RS08550 0.40 +0.3 1,913,954 + ABZR86_RS08550 0.40 +1.2 1,913,955 - ABZR86_RS08550 0.40 +0.5 1,913,955 - ABZR86_RS08550 0.40 -0.4 1,913,955 - ABZR86_RS08550 0.40 -1.1 1,914,026 + ABZR86_RS08550 0.46 +2.1 1,914,056 + ABZR86_RS08550 0.48 +0.2 1,914,056 + ABZR86_RS08550 0.48 +1.5 1,914,056 + ABZR86_RS08550 0.48 +0.5 1,914,057 - ABZR86_RS08550 0.48 +0.1 1,914,057 - ABZR86_RS08550 0.48 +0.0 1,914,057 - ABZR86_RS08550 0.48 -0.7 1,914,057 - ABZR86_RS08550 0.48 -0.0 1,914,089 + ABZR86_RS08550 0.51 -0.3 1,914,135 - ABZR86_RS08550 0.55 +0.3 1,914,135 - ABZR86_RS08550 0.55 +1.1 1,914,135 - ABZR86_RS08550 0.55 +0.6 1,914,228 - ABZR86_RS08550 0.63 +0.2 1,914,228 - ABZR86_RS08550 0.63 +0.8 1,914,228 - ABZR86_RS08550 0.63 -0.3 1,914,228 - ABZR86_RS08550 0.63 +0.6 1,914,228 - ABZR86_RS08550 0.63 -0.1 1,914,293 + ABZR86_RS08550 0.68 +0.4 1,914,293 + ABZR86_RS08550 0.68 +1.0 1,914,294 - ABZR86_RS08550 0.68 +0.6 1,914,294 - ABZR86_RS08550 0.68 -0.9 1,914,294 - ABZR86_RS08550 0.68 +0.1 1,914,294 - ABZR86_RS08550 0.68 +0.1 1,914,362 + ABZR86_RS08550 0.74 -0.2 1,914,362 + ABZR86_RS08550 0.74 +0.4 1,914,362 + ABZR86_RS08550 0.74 +1.2 1,914,362 + ABZR86_RS08550 0.74 +1.7 1,914,363 - ABZR86_RS08550 0.74 -0.4 1,914,363 - ABZR86_RS08550 0.74 +0.5 1,914,363 - ABZR86_RS08550 0.74 -3.0 1,914,486 - ABZR86_RS08550 0.84 +0.5 1,914,527 + ABZR86_RS08550 0.88 +0.9 1,914,528 - ABZR86_RS08550 0.88 +0.2 1,914,528 - ABZR86_RS08550 0.88 +0.4 1,914,665 - +0.5 1,914,808 + +0.3 1,914,875 + +0.9 1,914,875 + -0.2 1,914,875 + -0.1 1,914,875 + +0.2 1,914,887 + -0.4 1,914,887 + -0.3 1,914,888 - +0.3 1,914,914 + -0.1 1,914,914 + +1.3 1,914,915 - +0.0 1,914,915 - -2.0 1,914,931 + -1.1 1,915,047 + ABZR86_RS08555 0.51 -0.2 1,915,047 + ABZR86_RS08555 0.51 -0.2 1,915,047 + ABZR86_RS08555 0.51 -1.3 1,915,047 + ABZR86_RS08555 0.51 -0.1 1,915,047 + ABZR86_RS08555 0.51 -0.2 1,915,047 + ABZR86_RS08555 0.51 -0.3 1,915,047 + ABZR86_RS08555 0.51 -0.6 1,915,048 - ABZR86_RS08555 0.52 -0.5 1,915,048 - ABZR86_RS08555 0.52 -0.5 1,915,048 - ABZR86_RS08555 0.52 +0.5 1,915,048 - ABZR86_RS08555 0.52 -0.1 1,915,048 - ABZR86_RS08555 0.52 +0.8 1,915,048 - ABZR86_RS08555 0.52 +1.2 1,915,048 - ABZR86_RS08555 0.52 -0.8 1,915,138 - ABZR86_RS08555 0.86 +1.0 1,915,138 - ABZR86_RS08555 0.86 +0.2 1,915,138 - ABZR86_RS08555 0.86 -1.1 1,915,233 + -0.2 1,915,233 + +0.2 1,915,234 - -0.2 1,915,645 + +0.8
Or see this region's nucleotide sequence