Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS08540 and ABZR86_RS08545 are separated by 61 nucleotides ABZR86_RS08545 and ABZR86_RS08550 are separated by 83 nucleotides
ABZR86_RS08540: ABZR86_RS08540 - MerR family transcriptional regulator, at 1,911,316 to 1,912,344
_RS08540
ABZR86_RS08545: ABZR86_RS08545 - malate dehydrogenase, at 1,912,406 to 1,913,392
_RS08545
ABZR86_RS08550: ABZR86_RS08550 - pyridoxal phosphate-dependent aminotransferase, at 1,913,476 to 1,914,675
_RS08550
Position (kb)
1912
1913
1914 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1911.436 kb on + strand, within ABZR86_RS08540 at 1911.437 kb on - strand, within ABZR86_RS08540 at 1911.700 kb on + strand, within ABZR86_RS08540 at 1911.700 kb on + strand, within ABZR86_RS08540 at 1911.700 kb on + strand, within ABZR86_RS08540 at 1911.700 kb on + strand, within ABZR86_RS08540 at 1911.700 kb on + strand, within ABZR86_RS08540 at 1911.701 kb on - strand, within ABZR86_RS08540 at 1911.701 kb on - strand, within ABZR86_RS08540 at 1911.709 kb on + strand, within ABZR86_RS08540 at 1911.710 kb on - strand, within ABZR86_RS08540 at 1911.710 kb on - strand, within ABZR86_RS08540 at 1911.710 kb on - strand, within ABZR86_RS08540 at 1911.747 kb on + strand, within ABZR86_RS08540 at 1911.747 kb on + strand, within ABZR86_RS08540 at 1912.030 kb on + strand, within ABZR86_RS08540 at 1912.031 kb on - strand, within ABZR86_RS08540 at 1912.069 kb on + strand, within ABZR86_RS08540 at 1912.070 kb on - strand, within ABZR86_RS08540 at 1912.199 kb on - strand, within ABZR86_RS08540 at 1912.243 kb on + strand at 1912.300 kb on + strand at 1912.301 kb on - strand at 1912.407 kb on + strand at 1912.407 kb on + strand at 1913.546 kb on + strand at 1913.546 kb on + strand at 1913.547 kb on - strand at 1913.547 kb on - strand at 1913.547 kb on - strand at 1913.547 kb on - strand at 1913.547 kb on - strand at 1913.547 kb on - strand at 1913.689 kb on - strand, within ABZR86_RS08550 at 1913.702 kb on + strand, within ABZR86_RS08550 at 1913.703 kb on - strand, within ABZR86_RS08550 at 1913.954 kb on + strand, within ABZR86_RS08550 at 1913.954 kb on + strand, within ABZR86_RS08550 at 1913.955 kb on - strand, within ABZR86_RS08550 at 1913.955 kb on - strand, within ABZR86_RS08550 at 1913.955 kb on - strand, within ABZR86_RS08550 at 1914.026 kb on + strand, within ABZR86_RS08550 at 1914.056 kb on + strand, within ABZR86_RS08550 at 1914.056 kb on + strand, within ABZR86_RS08550 at 1914.056 kb on + strand, within ABZR86_RS08550 at 1914.057 kb on - strand, within ABZR86_RS08550 at 1914.057 kb on - strand, within ABZR86_RS08550 at 1914.057 kb on - strand, within ABZR86_RS08550 at 1914.057 kb on - strand, within ABZR86_RS08550 at 1914.089 kb on + strand, within ABZR86_RS08550 at 1914.135 kb on - strand, within ABZR86_RS08550 at 1914.135 kb on - strand, within ABZR86_RS08550 at 1914.135 kb on - strand, within ABZR86_RS08550 at 1914.228 kb on - strand, within ABZR86_RS08550 at 1914.228 kb on - strand, within ABZR86_RS08550 at 1914.228 kb on - strand, within ABZR86_RS08550 at 1914.228 kb on - strand, within ABZR86_RS08550 at 1914.228 kb on - strand, within ABZR86_RS08550 at 1914.293 kb on + strand, within ABZR86_RS08550 at 1914.293 kb on + strand, within ABZR86_RS08550 at 1914.294 kb on - strand, within ABZR86_RS08550 at 1914.294 kb on - strand, within ABZR86_RS08550 at 1914.294 kb on - strand, within ABZR86_RS08550 at 1914.294 kb on - strand, within ABZR86_RS08550 at 1914.362 kb on + strand, within ABZR86_RS08550 at 1914.362 kb on + strand, within ABZR86_RS08550 at 1914.362 kb on + strand, within ABZR86_RS08550 at 1914.362 kb on + strand, within ABZR86_RS08550 at 1914.363 kb on - strand, within ABZR86_RS08550 at 1914.363 kb on - strand, within ABZR86_RS08550 at 1914.363 kb on - strand, within ABZR86_RS08550
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 1,911,436 + ABZR86_RS08540 0.12 -0.8 1,911,437 - ABZR86_RS08540 0.12 +0.5 1,911,700 + ABZR86_RS08540 0.37 -0.2 1,911,700 + ABZR86_RS08540 0.37 -0.0 1,911,700 + ABZR86_RS08540 0.37 +0.7 1,911,700 + ABZR86_RS08540 0.37 +0.5 1,911,700 + ABZR86_RS08540 0.37 -1.0 1,911,701 - ABZR86_RS08540 0.37 -1.0 1,911,701 - ABZR86_RS08540 0.37 +0.6 1,911,709 + ABZR86_RS08540 0.38 +0.9 1,911,710 - ABZR86_RS08540 0.38 -0.3 1,911,710 - ABZR86_RS08540 0.38 -0.5 1,911,710 - ABZR86_RS08540 0.38 +0.7 1,911,747 + ABZR86_RS08540 0.42 +0.1 1,911,747 + ABZR86_RS08540 0.42 -0.3 1,912,030 + ABZR86_RS08540 0.69 +0.2 1,912,031 - ABZR86_RS08540 0.69 +0.2 1,912,069 + ABZR86_RS08540 0.73 -1.2 1,912,070 - ABZR86_RS08540 0.73 -0.7 1,912,199 - ABZR86_RS08540 0.86 -2.0 1,912,243 + +0.8 1,912,300 + -2.2 1,912,301 - +0.3 1,912,407 + +0.1 1,912,407 + -0.1 1,913,546 + +0.3 1,913,546 + -0.2 1,913,547 - -0.0 1,913,547 - -2.4 1,913,547 - -0.1 1,913,547 - -0.4 1,913,547 - +0.1 1,913,547 - +1.4 1,913,689 - ABZR86_RS08550 0.18 -1.5 1,913,702 + ABZR86_RS08550 0.19 -0.4 1,913,703 - ABZR86_RS08550 0.19 -0.8 1,913,954 + ABZR86_RS08550 0.40 +0.3 1,913,954 + ABZR86_RS08550 0.40 +1.2 1,913,955 - ABZR86_RS08550 0.40 +0.5 1,913,955 - ABZR86_RS08550 0.40 -0.4 1,913,955 - ABZR86_RS08550 0.40 -1.1 1,914,026 + ABZR86_RS08550 0.46 +2.1 1,914,056 + ABZR86_RS08550 0.48 +0.2 1,914,056 + ABZR86_RS08550 0.48 +1.5 1,914,056 + ABZR86_RS08550 0.48 +0.5 1,914,057 - ABZR86_RS08550 0.48 +0.1 1,914,057 - ABZR86_RS08550 0.48 +0.0 1,914,057 - ABZR86_RS08550 0.48 -0.7 1,914,057 - ABZR86_RS08550 0.48 -0.0 1,914,089 + ABZR86_RS08550 0.51 -0.3 1,914,135 - ABZR86_RS08550 0.55 +0.3 1,914,135 - ABZR86_RS08550 0.55 +1.1 1,914,135 - ABZR86_RS08550 0.55 +0.6 1,914,228 - ABZR86_RS08550 0.63 +0.2 1,914,228 - ABZR86_RS08550 0.63 +0.8 1,914,228 - ABZR86_RS08550 0.63 -0.3 1,914,228 - ABZR86_RS08550 0.63 +0.6 1,914,228 - ABZR86_RS08550 0.63 -0.1 1,914,293 + ABZR86_RS08550 0.68 +0.4 1,914,293 + ABZR86_RS08550 0.68 +1.0 1,914,294 - ABZR86_RS08550 0.68 +0.6 1,914,294 - ABZR86_RS08550 0.68 -0.9 1,914,294 - ABZR86_RS08550 0.68 +0.1 1,914,294 - ABZR86_RS08550 0.68 +0.1 1,914,362 + ABZR86_RS08550 0.74 -0.2 1,914,362 + ABZR86_RS08550 0.74 +0.4 1,914,362 + ABZR86_RS08550 0.74 +1.2 1,914,362 + ABZR86_RS08550 0.74 +1.7 1,914,363 - ABZR86_RS08550 0.74 -0.4 1,914,363 - ABZR86_RS08550 0.74 +0.5 1,914,363 - ABZR86_RS08550 0.74 -3.0
Or see this region's nucleotide sequence