Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS08435 and ABZR86_RS08440 are separated by 341 nucleotides ABZR86_RS08440 and ABZR86_RS08445 are separated by 108 nucleotides
ABZR86_RS08435: ABZR86_RS08435 - Fe/S-dependent 2-methylisocitrate dehydratase AcnD, at 1,881,999 to 1,884,608
_RS08435
ABZR86_RS08440: ABZR86_RS08440 - TerC family protein, at 1,884,950 to 1,885,636
_RS08440
ABZR86_RS08445: ABZR86_RS08445 - acetate kinase, at 1,885,745 to 1,887,133
_RS08445
Position (kb)
1884
1885
1886 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1884.503 kb on - strand at 1884.562 kb on + strand at 1884.608 kb on + strand at 1884.608 kb on + strand at 1884.608 kb on + strand at 1884.608 kb on + strand at 1884.609 kb on - strand at 1884.609 kb on - strand at 1884.609 kb on - strand at 1884.609 kb on - strand at 1884.609 kb on - strand at 1884.609 kb on - strand at 1884.609 kb on - strand at 1884.609 kb on - strand at 1884.609 kb on - strand at 1884.609 kb on - strand at 1884.609 kb on - strand at 1884.609 kb on - strand at 1884.609 kb on - strand at 1884.609 kb on - strand at 1884.609 kb on - strand at 1884.609 kb on - strand at 1884.609 kb on - strand at 1884.609 kb on - strand at 1884.686 kb on - strand at 1884.686 kb on - strand at 1884.690 kb on + strand at 1884.690 kb on + strand at 1884.691 kb on - strand at 1884.733 kb on + strand at 1884.733 kb on + strand at 1884.780 kb on + strand at 1884.780 kb on + strand at 1884.780 kb on + strand at 1884.780 kb on + strand at 1884.780 kb on + strand at 1884.781 kb on - strand at 1884.942 kb on + strand at 1884.942 kb on + strand at 1884.943 kb on - strand at 1884.943 kb on - strand at 1884.943 kb on - strand at 1884.943 kb on - strand at 1884.943 kb on - strand at 1884.943 kb on - strand at 1884.943 kb on - strand at 1885.145 kb on + strand, within ABZR86_RS08440 at 1885.146 kb on - strand, within ABZR86_RS08440 at 1885.146 kb on - strand, within ABZR86_RS08440 at 1885.449 kb on - strand, within ABZR86_RS08440 at 1885.449 kb on - strand, within ABZR86_RS08440 at 1885.449 kb on - strand, within ABZR86_RS08440 at 1885.592 kb on + strand at 1885.592 kb on + strand at 1885.592 kb on + strand at 1885.592 kb on + strand at 1885.593 kb on - strand at 1885.749 kb on + strand at 1885.749 kb on + strand at 1885.749 kb on + strand at 1885.749 kb on + strand at 1885.749 kb on + strand at 1885.750 kb on - strand at 1885.750 kb on - strand at 1885.750 kb on - strand at 1885.750 kb on - strand at 1885.750 kb on - strand at 1885.750 kb on - strand at 1885.750 kb on - strand at 1885.750 kb on - strand at 1886.094 kb on + strand, within ABZR86_RS08445 at 1886.133 kb on + strand, within ABZR86_RS08445 at 1886.134 kb on - strand, within ABZR86_RS08445 at 1886.298 kb on + strand, within ABZR86_RS08445 at 1886.298 kb on + strand, within ABZR86_RS08445 at 1886.298 kb on + strand, within ABZR86_RS08445 at 1886.299 kb on - strand, within ABZR86_RS08445 at 1886.299 kb on - strand, within ABZR86_RS08445 at 1886.299 kb on - strand, within ABZR86_RS08445 at 1886.301 kb on + strand, within ABZR86_RS08445 at 1886.335 kb on - strand, within ABZR86_RS08445 at 1886.448 kb on + strand, within ABZR86_RS08445 at 1886.449 kb on - strand, within ABZR86_RS08445 at 1886.449 kb on - strand, within ABZR86_RS08445 at 1886.449 kb on - strand, within ABZR86_RS08445 at 1886.577 kb on + strand, within ABZR86_RS08445 at 1886.622 kb on + strand, within ABZR86_RS08445
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 1,884,503 - -0.5 1,884,562 + -0.4 1,884,608 + +0.2 1,884,608 + -0.6 1,884,608 + +1.5 1,884,608 + +0.4 1,884,609 - -0.3 1,884,609 - -1.6 1,884,609 - -0.2 1,884,609 - -0.7 1,884,609 - -1.0 1,884,609 - -0.3 1,884,609 - -0.0 1,884,609 - +0.0 1,884,609 - -2.0 1,884,609 - +0.3 1,884,609 - -0.1 1,884,609 - -0.6 1,884,609 - +0.1 1,884,609 - +0.6 1,884,609 - +0.0 1,884,609 - -0.2 1,884,609 - +0.3 1,884,609 - -1.9 1,884,686 - -1.7 1,884,686 - -0.4 1,884,690 + -1.2 1,884,690 + +0.5 1,884,691 - +0.4 1,884,733 + -0.6 1,884,733 + -0.1 1,884,780 + -0.2 1,884,780 + -1.3 1,884,780 + -1.1 1,884,780 + +1.1 1,884,780 + -0.1 1,884,781 - -0.2 1,884,942 + +0.6 1,884,942 + -0.4 1,884,943 - +0.4 1,884,943 - +0.5 1,884,943 - +1.2 1,884,943 - +0.1 1,884,943 - +0.1 1,884,943 - +0.5 1,884,943 - -0.7 1,885,145 + ABZR86_RS08440 0.28 +2.0 1,885,146 - ABZR86_RS08440 0.29 +0.7 1,885,146 - ABZR86_RS08440 0.29 +0.8 1,885,449 - ABZR86_RS08440 0.73 -1.0 1,885,449 - ABZR86_RS08440 0.73 -0.2 1,885,449 - ABZR86_RS08440 0.73 +1.3 1,885,592 + +0.8 1,885,592 + -0.2 1,885,592 + -1.0 1,885,592 + -0.5 1,885,593 - +0.2 1,885,749 + +1.4 1,885,749 + +0.7 1,885,749 + -0.4 1,885,749 + +1.6 1,885,749 + +0.9 1,885,750 - +0.9 1,885,750 - -1.4 1,885,750 - -0.7 1,885,750 - -0.2 1,885,750 - +0.8 1,885,750 - -0.4 1,885,750 - +0.3 1,885,750 - +0.4 1,886,094 + ABZR86_RS08445 0.25 -0.2 1,886,133 + ABZR86_RS08445 0.28 +1.4 1,886,134 - ABZR86_RS08445 0.28 -2.0 1,886,298 + ABZR86_RS08445 0.40 +0.2 1,886,298 + ABZR86_RS08445 0.40 -1.1 1,886,298 + ABZR86_RS08445 0.40 +2.4 1,886,299 - ABZR86_RS08445 0.40 +0.1 1,886,299 - ABZR86_RS08445 0.40 +1.5 1,886,299 - ABZR86_RS08445 0.40 -0.4 1,886,301 + ABZR86_RS08445 0.40 -0.2 1,886,335 - ABZR86_RS08445 0.42 -0.4 1,886,448 + ABZR86_RS08445 0.51 +1.0 1,886,449 - ABZR86_RS08445 0.51 -0.8 1,886,449 - ABZR86_RS08445 0.51 -0.8 1,886,449 - ABZR86_RS08445 0.51 +0.4 1,886,577 + ABZR86_RS08445 0.60 +0.2 1,886,622 + ABZR86_RS08445 0.63 +0.6
Or see this region's nucleotide sequence