Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS08040 and ABZR86_RS08045 are separated by 35 nucleotides ABZR86_RS08045 and ABZR86_RS08050 are separated by 4 nucleotides
ABZR86_RS08040: ABZR86_RS08040 - chorismate synthase, at 1,796,567 to 1,797,655
_RS08040
ABZR86_RS08045: ABZR86_RS08045 - GNAT family N-acetyltransferase, at 1,797,691 to 1,798,260
_RS08045
ABZR86_RS08050: ABZR86_RS08050 - 50S ribosomal protein L3 N(5)-glutamine methyltransferase, at 1,798,265 to 1,799,188
_RS08050
Position (kb)
1797
1798
1799 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1796.988 kb on + strand, within ABZR86_RS08040 at 1797.313 kb on - strand, within ABZR86_RS08040 at 1797.324 kb on + strand, within ABZR86_RS08040 at 1797.324 kb on + strand, within ABZR86_RS08040 at 1797.324 kb on + strand, within ABZR86_RS08040 at 1797.324 kb on + strand, within ABZR86_RS08040 at 1797.324 kb on + strand, within ABZR86_RS08040 at 1797.330 kb on + strand, within ABZR86_RS08040 at 1797.330 kb on + strand, within ABZR86_RS08040 at 1797.330 kb on + strand, within ABZR86_RS08040 at 1797.331 kb on - strand, within ABZR86_RS08040 at 1797.331 kb on - strand, within ABZR86_RS08040 at 1797.372 kb on + strand, within ABZR86_RS08040 at 1797.372 kb on + strand, within ABZR86_RS08040 at 1797.373 kb on - strand, within ABZR86_RS08040 at 1797.373 kb on - strand, within ABZR86_RS08040 at 1797.373 kb on - strand, within ABZR86_RS08040 at 1797.442 kb on - strand, within ABZR86_RS08040 at 1797.442 kb on - strand, within ABZR86_RS08040 at 1797.490 kb on + strand, within ABZR86_RS08040 at 1797.491 kb on - strand, within ABZR86_RS08040 at 1797.491 kb on - strand, within ABZR86_RS08040 at 1797.491 kb on - strand, within ABZR86_RS08040 at 1797.679 kb on - strand at 1797.692 kb on + strand at 1797.692 kb on + strand at 1797.693 kb on - strand at 1797.785 kb on + strand, within ABZR86_RS08045 at 1797.785 kb on + strand, within ABZR86_RS08045 at 1797.785 kb on + strand, within ABZR86_RS08045 at 1797.785 kb on + strand, within ABZR86_RS08045 at 1797.786 kb on - strand, within ABZR86_RS08045 at 1797.786 kb on - strand, within ABZR86_RS08045 at 1797.786 kb on - strand, within ABZR86_RS08045 at 1797.849 kb on + strand, within ABZR86_RS08045 at 1797.850 kb on - strand, within ABZR86_RS08045 at 1798.163 kb on + strand, within ABZR86_RS08045 at 1798.164 kb on - strand, within ABZR86_RS08045 at 1798.458 kb on + strand, within ABZR86_RS08050 at 1798.458 kb on + strand, within ABZR86_RS08050 at 1798.542 kb on + strand, within ABZR86_RS08050 at 1798.543 kb on - strand, within ABZR86_RS08050 at 1798.563 kb on + strand, within ABZR86_RS08050 at 1798.581 kb on + strand, within ABZR86_RS08050 at 1798.581 kb on + strand, within ABZR86_RS08050 at 1798.752 kb on + strand, within ABZR86_RS08050 at 1798.753 kb on - strand, within ABZR86_RS08050 at 1798.753 kb on - strand, within ABZR86_RS08050 at 1798.753 kb on - strand, within ABZR86_RS08050 at 1798.753 kb on - strand, within ABZR86_RS08050 at 1798.753 kb on - strand, within ABZR86_RS08050 at 1798.753 kb on - strand, within ABZR86_RS08050 at 1798.938 kb on + strand, within ABZR86_RS08050 at 1798.938 kb on + strand, within ABZR86_RS08050 at 1798.938 kb on + strand, within ABZR86_RS08050 at 1798.939 kb on - strand, within ABZR86_RS08050 at 1799.025 kb on + strand, within ABZR86_RS08050 at 1799.025 kb on + strand, within ABZR86_RS08050 at 1799.026 kb on - strand, within ABZR86_RS08050 at 1799.148 kb on + strand at 1799.223 kb on + strand at 1799.223 kb on + strand at 1799.223 kb on + strand at 1799.223 kb on + strand at 1799.223 kb on + strand at 1799.223 kb on + strand at 1799.223 kb on + strand at 1799.223 kb on + strand at 1799.223 kb on + strand at 1799.223 kb on + strand at 1799.224 kb on - strand at 1799.224 kb on - strand at 1799.224 kb on - strand at 1799.224 kb on - strand at 1799.224 kb on - strand at 1799.224 kb on - strand at 1799.224 kb on - strand at 1799.224 kb on - strand at 1799.224 kb on - strand at 1799.224 kb on - strand at 1799.226 kb on - strand at 1799.226 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 1,796,988 + ABZR86_RS08040 0.39 -3.9 1,797,313 - ABZR86_RS08040 0.69 -2.8 1,797,324 + ABZR86_RS08040 0.70 -2.4 1,797,324 + ABZR86_RS08040 0.70 -3.5 1,797,324 + ABZR86_RS08040 0.70 -3.0 1,797,324 + ABZR86_RS08040 0.70 -1.6 1,797,324 + ABZR86_RS08040 0.70 -3.8 1,797,330 + ABZR86_RS08040 0.70 -1.3 1,797,330 + ABZR86_RS08040 0.70 -3.1 1,797,330 + ABZR86_RS08040 0.70 -3.4 1,797,331 - ABZR86_RS08040 0.70 -3.0 1,797,331 - ABZR86_RS08040 0.70 -2.8 1,797,372 + ABZR86_RS08040 0.74 -4.7 1,797,372 + ABZR86_RS08040 0.74 -1.6 1,797,373 - ABZR86_RS08040 0.74 -3.5 1,797,373 - ABZR86_RS08040 0.74 -2.8 1,797,373 - ABZR86_RS08040 0.74 -2.1 1,797,442 - ABZR86_RS08040 0.80 -3.8 1,797,442 - ABZR86_RS08040 0.80 -3.7 1,797,490 + ABZR86_RS08040 0.85 -0.5 1,797,491 - ABZR86_RS08040 0.85 -3.6 1,797,491 - ABZR86_RS08040 0.85 -3.2 1,797,491 - ABZR86_RS08040 0.85 -2.3 1,797,679 - -1.3 1,797,692 + -0.3 1,797,692 + -0.2 1,797,693 - -0.5 1,797,785 + ABZR86_RS08045 0.16 +0.4 1,797,785 + ABZR86_RS08045 0.16 +0.5 1,797,785 + ABZR86_RS08045 0.16 +0.6 1,797,785 + ABZR86_RS08045 0.16 +0.4 1,797,786 - ABZR86_RS08045 0.17 +0.9 1,797,786 - ABZR86_RS08045 0.17 +1.1 1,797,786 - ABZR86_RS08045 0.17 +1.0 1,797,849 + ABZR86_RS08045 0.28 +0.4 1,797,850 - ABZR86_RS08045 0.28 +0.7 1,798,163 + ABZR86_RS08045 0.83 +0.3 1,798,164 - ABZR86_RS08045 0.83 +1.2 1,798,458 + ABZR86_RS08050 0.21 +0.8 1,798,458 + ABZR86_RS08050 0.21 +0.6 1,798,542 + ABZR86_RS08050 0.30 -0.1 1,798,543 - ABZR86_RS08050 0.30 +0.5 1,798,563 + ABZR86_RS08050 0.32 +0.1 1,798,581 + ABZR86_RS08050 0.34 +0.1 1,798,581 + ABZR86_RS08050 0.34 +0.7 1,798,752 + ABZR86_RS08050 0.53 +1.6 1,798,753 - ABZR86_RS08050 0.53 -0.3 1,798,753 - ABZR86_RS08050 0.53 +0.9 1,798,753 - ABZR86_RS08050 0.53 +0.4 1,798,753 - ABZR86_RS08050 0.53 -0.1 1,798,753 - ABZR86_RS08050 0.53 -0.1 1,798,753 - ABZR86_RS08050 0.53 -0.3 1,798,938 + ABZR86_RS08050 0.73 -1.2 1,798,938 + ABZR86_RS08050 0.73 -1.7 1,798,938 + ABZR86_RS08050 0.73 +0.3 1,798,939 - ABZR86_RS08050 0.73 +0.7 1,799,025 + ABZR86_RS08050 0.82 +0.2 1,799,025 + ABZR86_RS08050 0.82 -0.4 1,799,026 - ABZR86_RS08050 0.82 +1.0 1,799,148 + +1.1 1,799,223 + +0.6 1,799,223 + +0.2 1,799,223 + +1.2 1,799,223 + +0.2 1,799,223 + +0.5 1,799,223 + +0.2 1,799,223 + +1.2 1,799,223 + +0.8 1,799,223 + +0.7 1,799,223 + -0.2 1,799,224 - +0.7 1,799,224 - -0.5 1,799,224 - +0.2 1,799,224 - -0.1 1,799,224 - +0.4 1,799,224 - +0.4 1,799,224 - +0.4 1,799,224 - -0.4 1,799,224 - -0.3 1,799,224 - -1.6 1,799,226 - +0.1 1,799,226 - -0.5
Or see this region's nucleotide sequence