Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS06370 and ABZR86_RS06375 are separated by 137 nucleotides ABZR86_RS06375 and ABZR86_RS06380 are separated by 68 nucleotides ABZR86_RS06380 and ABZR86_RS06385 overlap by 4 nucleotides
ABZR86_RS06370: ABZR86_RS06370 - glycine zipper 2TM domain-containing protein, at 1,417,905 to 1,418,495
_RS06370
ABZR86_RS06375: ABZR86_RS06375 - TatD family hydrolase, at 1,418,633 to 1,419,400
_RS06375
ABZR86_RS06380: ABZR86_RS06380 - MarR family transcriptional regulator, at 1,419,469 to 1,419,996
_RS06380
ABZR86_RS06385: ABZR86_RS06385 - efflux transporter outer membrane subunit, at 1,419,993 to 1,421,501
_RS06385
Position (kb)
1419
1420 Strain fitness (log2 ratio)
-2
-1
0
1 at 1418.495 kb on + strand at 1418.495 kb on + strand at 1418.495 kb on + strand at 1418.495 kb on + strand at 1418.495 kb on + strand at 1418.496 kb on - strand at 1418.496 kb on - strand at 1418.496 kb on - strand at 1418.496 kb on - strand at 1418.496 kb on - strand at 1418.496 kb on - strand at 1418.496 kb on - strand at 1418.550 kb on + strand at 1418.550 kb on + strand at 1418.551 kb on - strand at 1418.589 kb on + strand at 1418.589 kb on + strand at 1418.589 kb on + strand at 1418.590 kb on - strand at 1418.604 kb on + strand at 1418.609 kb on + strand at 1418.610 kb on - strand at 1418.644 kb on - strand at 1418.784 kb on + strand, within ABZR86_RS06375 at 1418.784 kb on + strand, within ABZR86_RS06375 at 1418.784 kb on + strand, within ABZR86_RS06375 at 1418.785 kb on - strand, within ABZR86_RS06375 at 1418.785 kb on - strand, within ABZR86_RS06375 at 1418.785 kb on - strand, within ABZR86_RS06375 at 1418.785 kb on - strand, within ABZR86_RS06375 at 1418.817 kb on - strand, within ABZR86_RS06375 at 1418.927 kb on + strand, within ABZR86_RS06375 at 1418.927 kb on + strand, within ABZR86_RS06375 at 1418.927 kb on + strand, within ABZR86_RS06375 at 1418.928 kb on - strand, within ABZR86_RS06375 at 1418.928 kb on - strand, within ABZR86_RS06375 at 1418.966 kb on + strand, within ABZR86_RS06375 at 1418.966 kb on + strand, within ABZR86_RS06375 at 1418.967 kb on - strand, within ABZR86_RS06375 at 1418.967 kb on - strand, within ABZR86_RS06375 at 1418.988 kb on + strand, within ABZR86_RS06375 at 1418.988 kb on + strand, within ABZR86_RS06375 at 1418.989 kb on - strand, within ABZR86_RS06375 at 1418.989 kb on - strand, within ABZR86_RS06375 at 1419.057 kb on + strand, within ABZR86_RS06375 at 1419.057 kb on + strand, within ABZR86_RS06375 at 1419.171 kb on - strand, within ABZR86_RS06375 at 1419.171 kb on - strand, within ABZR86_RS06375 at 1419.221 kb on + strand, within ABZR86_RS06375 at 1419.222 kb on - strand, within ABZR86_RS06375 at 1419.350 kb on - strand at 1419.436 kb on + strand at 1419.436 kb on + strand at 1419.436 kb on + strand at 1419.439 kb on + strand at 1419.439 kb on + strand at 1419.440 kb on - strand at 1419.455 kb on + strand at 1419.670 kb on + strand, within ABZR86_RS06380 at 1419.670 kb on + strand, within ABZR86_RS06380 at 1419.671 kb on - strand, within ABZR86_RS06380 at 1419.671 kb on - strand, within ABZR86_RS06380 at 1419.671 kb on - strand, within ABZR86_RS06380 at 1419.738 kb on + strand, within ABZR86_RS06380 at 1419.738 kb on + strand, within ABZR86_RS06380 at 1419.738 kb on + strand, within ABZR86_RS06380 at 1419.738 kb on + strand, within ABZR86_RS06380 at 1419.739 kb on - strand, within ABZR86_RS06380 at 1420.333 kb on + strand, within ABZR86_RS06385 at 1420.333 kb on + strand, within ABZR86_RS06385 at 1420.334 kb on - strand, within ABZR86_RS06385 at 1420.334 kb on - strand, within ABZR86_RS06385 at 1420.334 kb on - strand, within ABZR86_RS06385 at 1420.396 kb on - strand, within ABZR86_RS06385 at 1420.396 kb on - strand, within ABZR86_RS06385 at 1420.396 kb on - strand, within ABZR86_RS06385 at 1420.428 kb on + strand, within ABZR86_RS06385 at 1420.547 kb on + strand, within ABZR86_RS06385 at 1420.551 kb on + strand, within ABZR86_RS06385 at 1420.551 kb on + strand, within ABZR86_RS06385 at 1420.552 kb on - strand, within ABZR86_RS06385 at 1420.552 kb on - strand, within ABZR86_RS06385 at 1420.552 kb on - strand, within ABZR86_RS06385 at 1420.552 kb on - strand, within ABZR86_RS06385 at 1420.552 kb on - strand, within ABZR86_RS06385 at 1420.552 kb on - strand, within ABZR86_RS06385 at 1420.552 kb on - strand, within ABZR86_RS06385 at 1420.552 kb on - strand, within ABZR86_RS06385 at 1420.620 kb on + strand, within ABZR86_RS06385 at 1420.620 kb on + strand, within ABZR86_RS06385 at 1420.621 kb on - strand, within ABZR86_RS06385 at 1420.645 kb on + strand, within ABZR86_RS06385
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 1,418,495 + -0.4 1,418,495 + +0.3 1,418,495 + -1.4 1,418,495 + -0.4 1,418,495 + -1.9 1,418,496 - +0.8 1,418,496 - +0.3 1,418,496 - +0.0 1,418,496 - +0.6 1,418,496 - -0.1 1,418,496 - -0.4 1,418,496 - +1.6 1,418,550 + +0.1 1,418,550 + -0.3 1,418,551 - -0.2 1,418,589 + +0.7 1,418,589 + -1.1 1,418,589 + -0.4 1,418,590 - +0.1 1,418,604 + +1.1 1,418,609 + -0.6 1,418,610 - +0.6 1,418,644 - -2.2 1,418,784 + ABZR86_RS06375 0.20 +0.6 1,418,784 + ABZR86_RS06375 0.20 +1.0 1,418,784 + ABZR86_RS06375 0.20 -0.6 1,418,785 - ABZR86_RS06375 0.20 +0.2 1,418,785 - ABZR86_RS06375 0.20 +0.4 1,418,785 - ABZR86_RS06375 0.20 +0.9 1,418,785 - ABZR86_RS06375 0.20 -0.4 1,418,817 - ABZR86_RS06375 0.24 -1.1 1,418,927 + ABZR86_RS06375 0.38 +0.5 1,418,927 + ABZR86_RS06375 0.38 -0.5 1,418,927 + ABZR86_RS06375 0.38 -2.2 1,418,928 - ABZR86_RS06375 0.38 -0.4 1,418,928 - ABZR86_RS06375 0.38 +0.2 1,418,966 + ABZR86_RS06375 0.43 -0.8 1,418,966 + ABZR86_RS06375 0.43 +0.7 1,418,967 - ABZR86_RS06375 0.43 +0.3 1,418,967 - ABZR86_RS06375 0.43 -0.0 1,418,988 + ABZR86_RS06375 0.46 -0.5 1,418,988 + ABZR86_RS06375 0.46 -1.4 1,418,989 - ABZR86_RS06375 0.46 +0.5 1,418,989 - ABZR86_RS06375 0.46 -0.0 1,419,057 + ABZR86_RS06375 0.55 +1.1 1,419,057 + ABZR86_RS06375 0.55 -0.1 1,419,171 - ABZR86_RS06375 0.70 +0.5 1,419,171 - ABZR86_RS06375 0.70 +0.2 1,419,221 + ABZR86_RS06375 0.77 -0.4 1,419,222 - ABZR86_RS06375 0.77 +0.1 1,419,350 - +0.2 1,419,436 + -2.2 1,419,436 + -0.6 1,419,436 + -2.1 1,419,439 + -1.7 1,419,439 + -2.7 1,419,440 - +0.6 1,419,455 + +0.3 1,419,670 + ABZR86_RS06380 0.38 -0.8 1,419,670 + ABZR86_RS06380 0.38 -1.2 1,419,671 - ABZR86_RS06380 0.38 +0.7 1,419,671 - ABZR86_RS06380 0.38 +1.1 1,419,671 - ABZR86_RS06380 0.38 -1.4 1,419,738 + ABZR86_RS06380 0.51 -1.6 1,419,738 + ABZR86_RS06380 0.51 -1.2 1,419,738 + ABZR86_RS06380 0.51 -0.8 1,419,738 + ABZR86_RS06380 0.51 -1.6 1,419,739 - ABZR86_RS06380 0.51 +0.4 1,420,333 + ABZR86_RS06385 0.23 +0.5 1,420,333 + ABZR86_RS06385 0.23 -0.2 1,420,334 - ABZR86_RS06385 0.23 -1.4 1,420,334 - ABZR86_RS06385 0.23 +1.0 1,420,334 - ABZR86_RS06385 0.23 -0.1 1,420,396 - ABZR86_RS06385 0.27 +0.2 1,420,396 - ABZR86_RS06385 0.27 -0.1 1,420,396 - ABZR86_RS06385 0.27 +1.6 1,420,428 + ABZR86_RS06385 0.29 -0.0 1,420,547 + ABZR86_RS06385 0.37 -0.2 1,420,551 + ABZR86_RS06385 0.37 +0.4 1,420,551 + ABZR86_RS06385 0.37 -0.5 1,420,552 - ABZR86_RS06385 0.37 -0.7 1,420,552 - ABZR86_RS06385 0.37 +1.6 1,420,552 - ABZR86_RS06385 0.37 -1.9 1,420,552 - ABZR86_RS06385 0.37 +0.0 1,420,552 - ABZR86_RS06385 0.37 -1.1 1,420,552 - ABZR86_RS06385 0.37 +1.3 1,420,552 - ABZR86_RS06385 0.37 -0.5 1,420,552 - ABZR86_RS06385 0.37 +0.1 1,420,620 + ABZR86_RS06385 0.42 +0.6 1,420,620 + ABZR86_RS06385 0.42 +0.9 1,420,621 - ABZR86_RS06385 0.42 +1.0 1,420,645 + ABZR86_RS06385 0.43 +0.8
Or see this region's nucleotide sequence