Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS05160 and ABZR86_RS05165 are separated by 3 nucleotides ABZR86_RS05165 and ABZR86_RS05170 are separated by 32 nucleotides
ABZR86_RS05160: ABZR86_RS05160 - phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating), at 1,166,857 to 1,167,762
_RS05160
ABZR86_RS05165: ABZR86_RS05165 - transketolase, at 1,167,766 to 1,169,814
_RS05165
ABZR86_RS05170: ABZR86_RS05170 - transaldolase, at 1,169,847 to 1,170,929
_RS05170
Position (kb)
1167
1168
1169
1170 Strain fitness (log2 ratio)
-1
0
1 at 1166.788 kb on + strand at 1166.788 kb on + strand at 1166.788 kb on + strand at 1166.788 kb on + strand at 1166.788 kb on + strand at 1166.788 kb on + strand at 1166.788 kb on + strand at 1166.788 kb on + strand at 1166.789 kb on - strand at 1166.789 kb on - strand at 1166.799 kb on + strand at 1166.980 kb on - strand, within ABZR86_RS05160 at 1166.980 kb on - strand, within ABZR86_RS05160 at 1167.039 kb on + strand, within ABZR86_RS05160 at 1167.040 kb on - strand, within ABZR86_RS05160 at 1167.148 kb on + strand, within ABZR86_RS05160 at 1167.149 kb on - strand, within ABZR86_RS05160 at 1167.200 kb on - strand, within ABZR86_RS05160 at 1167.247 kb on + strand, within ABZR86_RS05160 at 1167.247 kb on + strand, within ABZR86_RS05160 at 1167.247 kb on + strand, within ABZR86_RS05160 at 1167.247 kb on + strand, within ABZR86_RS05160 at 1167.248 kb on - strand, within ABZR86_RS05160 at 1167.248 kb on - strand, within ABZR86_RS05160 at 1167.394 kb on + strand, within ABZR86_RS05160 at 1167.416 kb on - strand, within ABZR86_RS05160 at 1167.577 kb on + strand, within ABZR86_RS05160 at 1167.577 kb on + strand, within ABZR86_RS05160 at 1167.761 kb on - strand at 1168.022 kb on - strand, within ABZR86_RS05165 at 1168.145 kb on + strand, within ABZR86_RS05165 at 1168.226 kb on - strand, within ABZR86_RS05165 at 1168.451 kb on + strand, within ABZR86_RS05165 at 1168.451 kb on + strand, within ABZR86_RS05165 at 1168.451 kb on + strand, within ABZR86_RS05165 at 1168.452 kb on - strand, within ABZR86_RS05165 at 1168.452 kb on - strand, within ABZR86_RS05165 at 1168.452 kb on - strand, within ABZR86_RS05165 at 1168.452 kb on - strand, within ABZR86_RS05165 at 1168.452 kb on - strand, within ABZR86_RS05165 at 1168.571 kb on + strand, within ABZR86_RS05165 at 1168.572 kb on - strand, within ABZR86_RS05165 at 1168.865 kb on + strand, within ABZR86_RS05165 at 1168.865 kb on + strand, within ABZR86_RS05165 at 1168.866 kb on - strand, within ABZR86_RS05165 at 1169.223 kb on + strand, within ABZR86_RS05165 at 1169.223 kb on + strand, within ABZR86_RS05165 at 1169.223 kb on + strand, within ABZR86_RS05165 at 1169.224 kb on - strand, within ABZR86_RS05165 at 1169.224 kb on - strand, within ABZR86_RS05165 at 1169.264 kb on + strand, within ABZR86_RS05165 at 1169.360 kb on + strand, within ABZR86_RS05165 at 1169.361 kb on - strand, within ABZR86_RS05165 at 1169.361 kb on - strand, within ABZR86_RS05165 at 1169.595 kb on - strand, within ABZR86_RS05165 at 1169.696 kb on + strand at 1169.697 kb on - strand at 1169.697 kb on - strand at 1169.697 kb on - strand at 1169.697 kb on - strand at 1169.697 kb on - strand at 1169.782 kb on - strand at 1169.782 kb on - strand at 1169.831 kb on + strand at 1169.831 kb on + strand at 1170.115 kb on + strand, within ABZR86_RS05170 at 1170.115 kb on + strand, within ABZR86_RS05170 at 1170.115 kb on + strand, within ABZR86_RS05170 at 1170.116 kb on - strand, within ABZR86_RS05170 at 1170.116 kb on - strand, within ABZR86_RS05170 at 1170.232 kb on + strand, within ABZR86_RS05170 at 1170.233 kb on - strand, within ABZR86_RS05170 at 1170.241 kb on + strand, within ABZR86_RS05170 at 1170.241 kb on + strand, within ABZR86_RS05170 at 1170.242 kb on - strand, within ABZR86_RS05170 at 1170.395 kb on + strand, within ABZR86_RS05170 at 1170.396 kb on - strand, within ABZR86_RS05170 at 1170.397 kb on + strand, within ABZR86_RS05170 at 1170.397 kb on + strand, within ABZR86_RS05170 at 1170.397 kb on + strand, within ABZR86_RS05170 at 1170.398 kb on - strand, within ABZR86_RS05170 at 1170.398 kb on - strand, within ABZR86_RS05170 at 1170.398 kb on - strand, within ABZR86_RS05170 at 1170.398 kb on - strand, within ABZR86_RS05170 at 1170.398 kb on - strand, within ABZR86_RS05170 at 1170.398 kb on - strand, within ABZR86_RS05170 at 1170.418 kb on + strand, within ABZR86_RS05170 at 1170.418 kb on + strand, within ABZR86_RS05170 at 1170.520 kb on + strand, within ABZR86_RS05170 at 1170.521 kb on - strand, within ABZR86_RS05170 at 1170.757 kb on + strand, within ABZR86_RS05170 at 1170.758 kb on - strand, within ABZR86_RS05170
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 1,166,788 + -1.0 1,166,788 + -0.1 1,166,788 + -0.5 1,166,788 + +0.2 1,166,788 + +0.2 1,166,788 + -0.1 1,166,788 + +0.0 1,166,788 + -0.3 1,166,789 - -0.3 1,166,789 - +0.0 1,166,799 + -0.1 1,166,980 - ABZR86_RS05160 0.14 -0.5 1,166,980 - ABZR86_RS05160 0.14 +0.2 1,167,039 + ABZR86_RS05160 0.20 +0.3 1,167,040 - ABZR86_RS05160 0.20 +0.4 1,167,148 + ABZR86_RS05160 0.32 -0.2 1,167,149 - ABZR86_RS05160 0.32 +1.0 1,167,200 - ABZR86_RS05160 0.38 -0.7 1,167,247 + ABZR86_RS05160 0.43 +0.3 1,167,247 + ABZR86_RS05160 0.43 -0.4 1,167,247 + ABZR86_RS05160 0.43 -0.7 1,167,247 + ABZR86_RS05160 0.43 +0.3 1,167,248 - ABZR86_RS05160 0.43 -1.0 1,167,248 - ABZR86_RS05160 0.43 -0.2 1,167,394 + ABZR86_RS05160 0.59 -0.1 1,167,416 - ABZR86_RS05160 0.62 -0.9 1,167,577 + ABZR86_RS05160 0.79 +1.1 1,167,577 + ABZR86_RS05160 0.79 +1.0 1,167,761 - +1.0 1,168,022 - ABZR86_RS05165 0.12 +0.3 1,168,145 + ABZR86_RS05165 0.18 +0.5 1,168,226 - ABZR86_RS05165 0.22 -0.7 1,168,451 + ABZR86_RS05165 0.33 -1.0 1,168,451 + ABZR86_RS05165 0.33 +0.7 1,168,451 + ABZR86_RS05165 0.33 +0.5 1,168,452 - ABZR86_RS05165 0.33 -0.5 1,168,452 - ABZR86_RS05165 0.33 -0.5 1,168,452 - ABZR86_RS05165 0.33 -0.9 1,168,452 - ABZR86_RS05165 0.33 +0.4 1,168,452 - ABZR86_RS05165 0.33 +0.5 1,168,571 + ABZR86_RS05165 0.39 +0.4 1,168,572 - ABZR86_RS05165 0.39 +0.4 1,168,865 + ABZR86_RS05165 0.54 +0.5 1,168,865 + ABZR86_RS05165 0.54 +0.4 1,168,866 - ABZR86_RS05165 0.54 +0.2 1,169,223 + ABZR86_RS05165 0.71 +0.3 1,169,223 + ABZR86_RS05165 0.71 -0.9 1,169,223 + ABZR86_RS05165 0.71 -0.2 1,169,224 - ABZR86_RS05165 0.71 +0.2 1,169,224 - ABZR86_RS05165 0.71 +0.5 1,169,264 + ABZR86_RS05165 0.73 -0.1 1,169,360 + ABZR86_RS05165 0.78 -0.7 1,169,361 - ABZR86_RS05165 0.78 +0.2 1,169,361 - ABZR86_RS05165 0.78 -0.5 1,169,595 - ABZR86_RS05165 0.89 +0.5 1,169,696 + -1.2 1,169,697 - +0.5 1,169,697 - -1.0 1,169,697 - +1.0 1,169,697 - -0.1 1,169,697 - +0.3 1,169,782 - +0.1 1,169,782 - +0.5 1,169,831 + -0.4 1,169,831 + -1.0 1,170,115 + ABZR86_RS05170 0.25 +0.9 1,170,115 + ABZR86_RS05170 0.25 +0.4 1,170,115 + ABZR86_RS05170 0.25 -1.0 1,170,116 - ABZR86_RS05170 0.25 +0.0 1,170,116 - ABZR86_RS05170 0.25 -0.3 1,170,232 + ABZR86_RS05170 0.36 -0.6 1,170,233 - ABZR86_RS05170 0.36 -0.5 1,170,241 + ABZR86_RS05170 0.36 -0.8 1,170,241 + ABZR86_RS05170 0.36 -0.3 1,170,242 - ABZR86_RS05170 0.36 -1.0 1,170,395 + ABZR86_RS05170 0.51 +0.3 1,170,396 - ABZR86_RS05170 0.51 -0.2 1,170,397 + ABZR86_RS05170 0.51 +0.2 1,170,397 + ABZR86_RS05170 0.51 -1.2 1,170,397 + ABZR86_RS05170 0.51 +0.7 1,170,398 - ABZR86_RS05170 0.51 +0.2 1,170,398 - ABZR86_RS05170 0.51 +0.2 1,170,398 - ABZR86_RS05170 0.51 -0.0 1,170,398 - ABZR86_RS05170 0.51 -0.2 1,170,398 - ABZR86_RS05170 0.51 +0.4 1,170,398 - ABZR86_RS05170 0.51 -1.7 1,170,418 + ABZR86_RS05170 0.53 +0.4 1,170,418 + ABZR86_RS05170 0.53 -0.5 1,170,520 + ABZR86_RS05170 0.62 +0.4 1,170,521 - ABZR86_RS05170 0.62 -1.0 1,170,757 + ABZR86_RS05170 0.84 -1.6 1,170,758 - ABZR86_RS05170 0.84 -1.5
Or see this region's nucleotide sequence