Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_3204
Experiment: MoYLS4 with Sisomicin 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Sisomicin 0.0156 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,036,232 | - | DvMF_3203 | 0.59 | -1.0 | |
4,036,318 | - | DvMF_3203 | 0.64 | -0.0 | |
4,036,351 | + | DvMF_3203 | 0.66 | -0.6 | |
4,036,531 | + | DvMF_3203 | 0.77 | -0.2 | |
4,036,728 | + | DvMF_3203 | 0.88 | -0.1 | |
4,036,809 | - | -0.5 | |||
4,036,834 | - | -0.2 | |||
4,036,860 | + | +1.7 | |||
4,037,002 | + | +0.1 | |||
4,037,047 | - | -0.3 | |||
4,037,083 | + | -0.4 | |||
4,037,098 | + | -0.1 | |||
4,037,343 | + | DvMF_3204 | 0.28 | -0.7 | |
4,037,351 | - | DvMF_3204 | 0.30 | -2.2 | |
4,037,385 | + | DvMF_3204 | 0.35 | -0.8 | |
4,037,388 | + | DvMF_3204 | 0.36 | -1.4 | |
4,037,401 | - | DvMF_3204 | 0.38 | -1.5 | |
4,037,729 | - | +0.1 | |||
4,037,790 | + | -1.2 | |||
4,037,811 | + | -1.3 | |||
4,037,872 | - | +0.5 | |||
4,038,272 | + | ruvB | DvMF_3205 | 0.49 | -1.3 |
4,038,638 | - | ruvB | DvMF_3205 | 0.85 | +0.4 |
Or see this region's nucleotide sequence