Experiment: MoYLS4 with Sisomicin 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_3015 and DvMF_3016 overlap by 8 nucleotides DvMF_3016 and DvMF_3017 are separated by 103 nucleotides
DvMF_3015: DvMF_3015 - aminotransferase class I and II (RefSeq), at 3,804,076 to 3,805,347
_3015
DvMF_3016: DvMF_3016 - glycosyl transferase group 1 (RefSeq), at 3,805,340 to 3,806,461
_3016
DvMF_3017: DvMF_3017 - glycosyl transferase group 1 (RefSeq), at 3,806,565 to 3,807,647
_3017
Position (kb)
3805
3806
3807 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3804.362 kb on + strand, within DvMF_3015 at 3804.688 kb on + strand, within DvMF_3015 at 3804.779 kb on - strand, within DvMF_3015 at 3804.892 kb on - strand, within DvMF_3015 at 3804.914 kb on + strand, within DvMF_3015 at 3805.256 kb on + strand at 3805.490 kb on - strand, within DvMF_3016 at 3805.694 kb on - strand, within DvMF_3016 at 3805.737 kb on - strand, within DvMF_3016 at 3805.804 kb on - strand, within DvMF_3016 at 3805.857 kb on - strand, within DvMF_3016 at 3805.870 kb on + strand, within DvMF_3016 at 3805.892 kb on + strand, within DvMF_3016 at 3805.942 kb on - strand, within DvMF_3016 at 3806.139 kb on - strand, within DvMF_3016 at 3806.258 kb on - strand, within DvMF_3016 at 3806.304 kb on + strand, within DvMF_3016 at 3806.312 kb on - strand, within DvMF_3016 at 3806.312 kb on - strand, within DvMF_3016 at 3806.335 kb on + strand, within DvMF_3016 at 3806.343 kb on - strand, within DvMF_3016 at 3806.603 kb on + strand at 3806.665 kb on + strand at 3806.797 kb on + strand, within DvMF_3017 at 3806.797 kb on - strand, within DvMF_3017 at 3806.845 kb on + strand, within DvMF_3017 at 3806.869 kb on + strand, within DvMF_3017 at 3806.877 kb on - strand, within DvMF_3017 at 3806.877 kb on - strand, within DvMF_3017 at 3806.987 kb on + strand, within DvMF_3017 at 3807.196 kb on + strand, within DvMF_3017 at 3807.216 kb on + strand, within DvMF_3017
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Sisomicin 0.0156 mg/ml remove 3,804,362 + DvMF_3015 0.22 -0.5 3,804,688 + DvMF_3015 0.48 +0.1 3,804,779 - DvMF_3015 0.55 -0.7 3,804,892 - DvMF_3015 0.64 -0.2 3,804,914 + DvMF_3015 0.66 +1.0 3,805,256 + -1.0 3,805,490 - DvMF_3016 0.13 -1.7 3,805,694 - DvMF_3016 0.32 -1.9 3,805,737 - DvMF_3016 0.35 -2.5 3,805,804 - DvMF_3016 0.41 -2.5 3,805,857 - DvMF_3016 0.46 -2.3 3,805,870 + DvMF_3016 0.47 -2.6 3,805,892 + DvMF_3016 0.49 -3.2 3,805,942 - DvMF_3016 0.54 -3.1 3,806,139 - DvMF_3016 0.71 -4.6 3,806,258 - DvMF_3016 0.82 -4.7 3,806,304 + DvMF_3016 0.86 -2.4 3,806,312 - DvMF_3016 0.87 -3.4 3,806,312 - DvMF_3016 0.87 -2.9 3,806,335 + DvMF_3016 0.89 -3.2 3,806,343 - DvMF_3016 0.89 -1.6 3,806,603 + -1.5 3,806,665 + -4.3 3,806,797 + DvMF_3017 0.21 -2.6 3,806,797 - DvMF_3017 0.21 -1.9 3,806,845 + DvMF_3017 0.26 -2.8 3,806,869 + DvMF_3017 0.28 -3.0 3,806,877 - DvMF_3017 0.29 -3.3 3,806,877 - DvMF_3017 0.29 -2.3 3,806,987 + DvMF_3017 0.39 -2.2 3,807,196 + DvMF_3017 0.58 -3.2 3,807,216 + DvMF_3017 0.60 -2.6
Or see this region's nucleotide sequence