Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2953
Experiment: MoYLS4 with Sisomicin 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Sisomicin 0.0156 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,724,163 | - | -0.3 | |||
3,724,644 | - | DvMF_2952 | 0.50 | +1.1 | |
3,724,688 | + | DvMF_2952 | 0.58 | -0.1 | |
3,724,754 | - | DvMF_2952 | 0.68 | -0.5 | |
3,724,758 | - | DvMF_2952 | 0.69 | -1.8 | |
3,724,991 | + | +0.4 | |||
3,725,012 | + | -0.9 | |||
3,725,012 | + | -0.6 | |||
3,725,056 | - | -0.2 | |||
3,725,056 | - | -0.2 | |||
3,725,088 | + | -0.4 | |||
3,725,286 | + | DvMF_2953 | 0.12 | -1.4 | |
3,725,525 | - | DvMF_2953 | 0.32 | -1.3 | |
3,725,883 | + | DvMF_2953 | 0.61 | -0.5 | |
3,726,110 | + | DvMF_2953 | 0.80 | -1.2 | |
3,726,117 | - | DvMF_2953 | 0.80 | -2.2 | |
3,726,127 | + | DvMF_2953 | 0.81 | -0.7 | |
3,726,248 | + | -0.4 | |||
3,726,265 | + | -1.2 | |||
3,726,452 | + | -1.2 | |||
3,726,618 | - | DvMF_2954 | 0.20 | -1.6 | |
3,726,736 | - | DvMF_2954 | 0.28 | -1.0 | |
3,726,850 | + | DvMF_2954 | 0.37 | -1.1 | |
3,727,100 | + | DvMF_2954 | 0.56 | -1.3 | |
3,727,266 | - | DvMF_2954 | 0.68 | -1.6 | |
3,727,341 | + | DvMF_2954 | 0.74 | -2.1 | |
3,727,341 | + | DvMF_2954 | 0.74 | -1.1 | |
3,727,341 | + | DvMF_2954 | 0.74 | -1.8 | |
3,727,341 | + | DvMF_2954 | 0.74 | -1.9 | |
3,727,341 | + | DvMF_2954 | 0.74 | -0.4 | |
3,727,347 | + | DvMF_2954 | 0.74 | -1.6 | |
3,727,349 | - | DvMF_2954 | 0.74 | -1.2 |
Or see this region's nucleotide sequence