Experiment: MoYLS4 with Sisomicin 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2952 and DvMF_2953 are separated by 185 nucleotides DvMF_2953 and DvMF_2954 overlap by 1 nucleotides
DvMF_2952: DvMF_2952 - metal dependent phosphohydrolase (RefSeq), at 3,724,329 to 3,724,952
_2952
DvMF_2953: DvMF_2953 - protein of unknown function DUF214 (RefSeq), at 3,725,138 to 3,726,358
_2953
DvMF_2954: DvMF_2954 - protein of unknown function DUF214 (RefSeq), at 3,726,358 to 3,727,689
_2954
Position (kb)
3725
3726
3727 Strain fitness (log2 ratio)
-2
-1
0
1 at 3724.163 kb on - strand at 3724.644 kb on - strand, within DvMF_2952 at 3724.688 kb on + strand, within DvMF_2952 at 3724.754 kb on - strand, within DvMF_2952 at 3724.758 kb on - strand, within DvMF_2952 at 3724.991 kb on + strand at 3725.012 kb on + strand at 3725.012 kb on + strand at 3725.056 kb on - strand at 3725.056 kb on - strand at 3725.088 kb on + strand at 3725.286 kb on + strand, within DvMF_2953 at 3725.525 kb on - strand, within DvMF_2953 at 3725.883 kb on + strand, within DvMF_2953 at 3726.110 kb on + strand, within DvMF_2953 at 3726.117 kb on - strand, within DvMF_2953 at 3726.127 kb on + strand, within DvMF_2953 at 3726.248 kb on + strand at 3726.265 kb on + strand at 3726.452 kb on + strand at 3726.618 kb on - strand, within DvMF_2954 at 3726.736 kb on - strand, within DvMF_2954 at 3726.850 kb on + strand, within DvMF_2954 at 3727.100 kb on + strand, within DvMF_2954 at 3727.266 kb on - strand, within DvMF_2954 at 3727.341 kb on + strand, within DvMF_2954 at 3727.341 kb on + strand, within DvMF_2954 at 3727.341 kb on + strand, within DvMF_2954 at 3727.341 kb on + strand, within DvMF_2954 at 3727.341 kb on + strand, within DvMF_2954 at 3727.347 kb on + strand, within DvMF_2954 at 3727.349 kb on - strand, within DvMF_2954
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Sisomicin 0.0156 mg/ml remove 3,724,163 - -0.3 3,724,644 - DvMF_2952 0.50 +1.1 3,724,688 + DvMF_2952 0.58 -0.1 3,724,754 - DvMF_2952 0.68 -0.5 3,724,758 - DvMF_2952 0.69 -1.8 3,724,991 + +0.4 3,725,012 + -0.9 3,725,012 + -0.6 3,725,056 - -0.2 3,725,056 - -0.2 3,725,088 + -0.4 3,725,286 + DvMF_2953 0.12 -1.4 3,725,525 - DvMF_2953 0.32 -1.3 3,725,883 + DvMF_2953 0.61 -0.5 3,726,110 + DvMF_2953 0.80 -1.2 3,726,117 - DvMF_2953 0.80 -2.2 3,726,127 + DvMF_2953 0.81 -0.7 3,726,248 + -0.4 3,726,265 + -1.2 3,726,452 + -1.2 3,726,618 - DvMF_2954 0.20 -1.6 3,726,736 - DvMF_2954 0.28 -1.0 3,726,850 + DvMF_2954 0.37 -1.1 3,727,100 + DvMF_2954 0.56 -1.3 3,727,266 - DvMF_2954 0.68 -1.6 3,727,341 + DvMF_2954 0.74 -2.1 3,727,341 + DvMF_2954 0.74 -1.1 3,727,341 + DvMF_2954 0.74 -1.8 3,727,341 + DvMF_2954 0.74 -1.9 3,727,341 + DvMF_2954 0.74 -0.4 3,727,347 + DvMF_2954 0.74 -1.6 3,727,349 - DvMF_2954 0.74 -1.2
Or see this region's nucleotide sequence