Experiment: MoYLS4 with Sisomicin 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2689 and DvMF_2690 are separated by 12 nucleotides DvMF_2690 and DvMF_2691 are separated by 165 nucleotides DvMF_2691 and DvMF_2692 overlap by 4 nucleotides DvMF_2692 and DvMF_2693 are separated by 195 nucleotides
DvMF_2689: DvMF_2689 - molybdopterin oxidoreductase (RefSeq), at 3,401,353 to 3,403,428
_2689
DvMF_2690: DvMF_2690 - hypothetical protein (RefSeq), at 3,403,441 to 3,404,076
_2690
DvMF_2691: DvMF_2691 - mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase (RefSeq), at 3,404,242 to 3,405,747
_2691
DvMF_2692: DvMF_2692 - dTDP-4-dehydrorhamnose 3,5-epimerase (RefSeq), at 3,405,744 to 3,406,334
_2692
DvMF_2693: DvMF_2693 - histidine kinase (RefSeq), at 3,406,530 to 3,408,245
_2693
Position (kb)
3404
3405
3406 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3403.857 kb on + strand, within DvMF_2690 at 3403.865 kb on - strand, within DvMF_2690 at 3404.086 kb on - strand at 3404.522 kb on - strand, within DvMF_2691 at 3404.671 kb on + strand, within DvMF_2691 at 3404.788 kb on - strand, within DvMF_2691 at 3404.931 kb on + strand, within DvMF_2691 at 3405.113 kb on + strand, within DvMF_2691 at 3405.243 kb on + strand, within DvMF_2691 at 3405.313 kb on - strand, within DvMF_2691 at 3405.481 kb on - strand, within DvMF_2691 at 3405.502 kb on - strand, within DvMF_2691 at 3405.867 kb on + strand, within DvMF_2692 at 3405.878 kb on + strand, within DvMF_2692 at 3405.878 kb on + strand, within DvMF_2692 at 3405.878 kb on + strand, within DvMF_2692 at 3405.975 kb on - strand, within DvMF_2692 at 3405.980 kb on + strand, within DvMF_2692 at 3405.988 kb on - strand, within DvMF_2692 at 3406.028 kb on + strand, within DvMF_2692 at 3406.108 kb on + strand, within DvMF_2692 at 3406.125 kb on - strand, within DvMF_2692 at 3406.173 kb on - strand, within DvMF_2692 at 3406.178 kb on - strand, within DvMF_2692 at 3406.235 kb on + strand, within DvMF_2692 at 3406.353 kb on - strand at 3406.558 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Sisomicin 0.0156 mg/ml remove 3,403,857 + DvMF_2690 0.65 -1.7 3,403,865 - DvMF_2690 0.67 -0.1 3,404,086 - -0.9 3,404,522 - DvMF_2691 0.19 -2.4 3,404,671 + DvMF_2691 0.28 -2.8 3,404,788 - DvMF_2691 0.36 -3.1 3,404,931 + DvMF_2691 0.46 -1.8 3,405,113 + DvMF_2691 0.58 -4.1 3,405,243 + DvMF_2691 0.66 -2.4 3,405,313 - DvMF_2691 0.71 -0.9 3,405,481 - DvMF_2691 0.82 -3.6 3,405,502 - DvMF_2691 0.84 -1.4 3,405,867 + DvMF_2692 0.21 -0.4 3,405,878 + DvMF_2692 0.23 -1.0 3,405,878 + DvMF_2692 0.23 +0.8 3,405,878 + DvMF_2692 0.23 -0.8 3,405,975 - DvMF_2692 0.39 -0.7 3,405,980 + DvMF_2692 0.40 -1.0 3,405,988 - DvMF_2692 0.41 -0.5 3,406,028 + DvMF_2692 0.48 +0.6 3,406,108 + DvMF_2692 0.62 -0.7 3,406,125 - DvMF_2692 0.64 -0.8 3,406,173 - DvMF_2692 0.73 -0.5 3,406,178 - DvMF_2692 0.73 -0.2 3,406,235 + DvMF_2692 0.83 -1.0 3,406,353 - -0.6 3,406,558 + +0.5
Or see this region's nucleotide sequence