Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2645
Experiment: MoYLS4 with Sisomicin 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Sisomicin 0.0156 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,346,283 | - | DvMF_2644 | 0.56 | -0.3 | |
3,346,382 | - | DvMF_2644 | 0.61 | -0.2 | |
3,346,466 | - | DvMF_2644 | 0.65 | -0.4 | |
3,346,748 | - | DvMF_2644 | 0.79 | -0.4 | |
3,346,838 | - | DvMF_2644 | 0.84 | -0.5 | |
3,346,854 | + | DvMF_2644 | 0.85 | -0.1 | |
3,346,902 | - | DvMF_2644 | 0.87 | -0.4 | |
3,347,081 | + | -0.1 | |||
3,347,311 | + | -1.1 | |||
3,347,317 | - | -1.8 | |||
3,347,432 | - | DvMF_2645 | 0.13 | -1.3 | |
3,347,516 | - | DvMF_2645 | 0.19 | -0.6 | |
3,347,924 | - | DvMF_2645 | 0.51 | -1.7 | |
3,348,026 | + | DvMF_2645 | 0.59 | -1.9 | |
3,348,098 | + | DvMF_2645 | 0.64 | +0.5 | |
3,348,306 | - | DvMF_2645 | 0.80 | -1.6 | |
3,348,573 | + | -0.5 | |||
3,348,581 | - | +0.4 | |||
3,348,696 | + | -0.7 | |||
3,348,696 | + | -1.2 | |||
3,348,704 | - | -0.8 | |||
3,348,838 | - | DvMF_2646 | 0.20 | -0.6 | |
3,348,919 | + | DvMF_2646 | 0.29 | -1.4 | |
3,348,965 | + | DvMF_2646 | 0.34 | -0.5 | |
3,349,405 | + | DvMF_2646 | 0.84 | -0.7 |
Or see this region's nucleotide sequence