Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2279
Experiment: MoYLS4 with Sisomicin 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Sisomicin 0.0156 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,865,620 | - | DvMF_2278 | 0.43 | -1.7 | |
2,866,449 | + | -0.8 | |||
2,866,566 | + | -1.1 | |||
2,866,617 | - | -0.1 | |||
2,866,753 | + | DvMF_2279 | 0.13 | -2.7 | |
2,866,938 | + | DvMF_2279 | 0.29 | -2.8 | |
2,866,984 | + | DvMF_2279 | 0.33 | -2.3 | |
2,866,993 | - | DvMF_2279 | 0.34 | -3.2 | |
2,867,111 | - | DvMF_2279 | 0.44 | -3.5 | |
2,867,309 | + | DvMF_2279 | 0.62 | -2.7 | |
2,867,542 | - | DvMF_2279 | 0.83 | -3.3 | |
2,867,579 | + | DvMF_2279 | 0.86 | -1.4 | |
2,867,798 | + | -0.5 | |||
2,867,856 | - | -0.2 | |||
2,868,289 | - | -0.4 | |||
2,868,359 | - | -2.7 | |||
2,868,497 | + | DvMF_2280 | 0.19 | -1.0 | |
2,868,560 | - | DvMF_2280 | 0.25 | -2.6 | |
2,868,562 | + | DvMF_2280 | 0.25 | -2.7 | |
2,868,577 | - | DvMF_2280 | 0.27 | -3.1 | |
2,868,697 | + | DvMF_2280 | 0.38 | -2.9 |
Or see this region's nucleotide sequence