Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2102
Experiment: MoYLS4 with Sisomicin 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Sisomicin 0.0156 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,619,847 | + | DvMF_2101 | 0.47 | -0.4 | |
2,619,867 | + | DvMF_2101 | 0.49 | -0.9 | |
2,620,007 | + | DvMF_2101 | 0.59 | +0.1 | |
2,620,047 | + | DvMF_2101 | 0.61 | +0.3 | |
2,620,142 | + | DvMF_2101 | 0.68 | -0.2 | |
2,620,304 | + | DvMF_2101 | 0.79 | -0.4 | |
2,620,358 | - | DvMF_2101 | 0.83 | -0.7 | |
2,620,425 | - | DvMF_2101 | 0.88 | -0.7 | |
2,620,439 | + | DvMF_2101 | 0.89 | +0.1 | |
2,620,638 | + | -1.2 | |||
2,620,638 | + | -0.6 | |||
2,620,638 | + | -0.4 | |||
2,620,697 | - | -0.1 | |||
2,620,786 | - | -0.6 | |||
2,620,836 | - | -0.3 | |||
2,620,889 | - | DvMF_2102 | 0.16 | -1.0 | |
2,620,961 | - | DvMF_2102 | 0.24 | -1.0 | |
2,621,067 | - | DvMF_2102 | 0.36 | -0.8 | |
2,621,374 | + | DvMF_2102 | 0.71 | -1.3 |
Or see this region's nucleotide sequence