Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1930
Experiment: MoYLS4 with Sisomicin 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Sisomicin 0.0156 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,379,688 | - | DvMF_1929 | 0.18 | -0.2 | |
2,379,701 | + | DvMF_1929 | 0.19 | -0.5 | |
2,379,778 | - | DvMF_1929 | 0.26 | -0.3 | |
2,379,859 | - | DvMF_1929 | 0.34 | -0.4 | |
2,379,859 | - | DvMF_1929 | 0.34 | +0.8 | |
2,379,908 | + | DvMF_1929 | 0.39 | -0.3 | |
2,380,075 | - | DvMF_1929 | 0.54 | -0.1 | |
2,380,156 | - | DvMF_1929 | 0.62 | +0.2 | |
2,380,187 | + | DvMF_1929 | 0.65 | -0.3 | |
2,380,210 | + | DvMF_1929 | 0.67 | -0.1 | |
2,380,210 | + | DvMF_1929 | 0.67 | +0.1 | |
2,380,252 | + | DvMF_1929 | 0.71 | +0.1 | |
2,380,260 | - | DvMF_1929 | 0.71 | -0.6 | |
2,380,490 | + | +0.2 | |||
2,380,661 | + | -1.2 | |||
2,380,871 | + | DvMF_1930 | 0.43 | -0.3 | |
2,380,906 | - | DvMF_1930 | 0.51 | +0.8 | |
2,381,069 | - | DvMF_1930 | 0.88 | -0.4 | |
2,381,130 | + | -0.6 | |||
2,381,162 | - | -0.5 | |||
2,381,190 | - | -0.7 | |||
2,381,266 | + | -1.0 | |||
2,381,266 | + | -0.5 | |||
2,381,539 | + | DvMF_1931 | 0.21 | -0.6 | |
2,381,901 | + | DvMF_1931 | 0.40 | -0.5 | |
2,381,909 | - | DvMF_1931 | 0.40 | -0.2 | |
2,381,945 | - | DvMF_1931 | 0.42 | -0.7 | |
2,382,067 | + | DvMF_1931 | 0.49 | +0.4 |
Or see this region's nucleotide sequence