Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1894
Experiment: MoYLS4 with Sisomicin 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Sisomicin 0.0156 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,330,709 | - | -0.4 | |||
2,330,734 | + | -0.3 | |||
2,330,892 | + | -2.0 | |||
2,330,947 | - | DvMF_1893 | 0.14 | -3.2 | |
2,331,145 | - | DvMF_1893 | 0.42 | -1.6 | |
2,331,257 | + | DvMF_1893 | 0.58 | -1.4 | |
2,331,373 | + | DvMF_1893 | 0.75 | -1.4 | |
2,331,378 | + | DvMF_1893 | 0.76 | -3.1 | |
2,331,405 | - | DvMF_1893 | 0.80 | -1.7 | |
2,331,420 | - | DvMF_1893 | 0.82 | -2.5 | |
2,331,584 | + | -0.8 | |||
2,331,687 | - | -1.1 | |||
2,331,898 | + | DvMF_1894 | 0.20 | -1.8 | |
2,332,027 | - | DvMF_1894 | 0.32 | -2.2 | |
2,332,458 | - | DvMF_1894 | 0.72 | -2.8 | |
2,332,667 | - | -2.0 | |||
2,332,844 | - | -1.1 | |||
2,333,054 | - | -3.4 | |||
2,333,109 | - | DvMF_1895 | 0.12 | -2.1 | |
2,333,129 | - | DvMF_1895 | 0.13 | -1.8 | |
2,333,204 | - | DvMF_1895 | 0.17 | -1.1 | |
2,333,487 | + | DvMF_1895 | 0.34 | -2.3 | |
2,333,490 | - | DvMF_1895 | 0.34 | -1.4 | |
2,333,690 | - | DvMF_1895 | 0.46 | -2.3 | |
2,333,707 | + | DvMF_1895 | 0.47 | -1.9 | |
2,333,715 | - | DvMF_1895 | 0.48 | -2.3 |
Or see this region's nucleotide sequence