Experiment: MoYLS4 with Sisomicin 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1890 and DvMF_1891 are separated by 389 nucleotides DvMF_1891 and DvMF_1892 are separated by 7 nucleotides
DvMF_1890: DvMF_1890 - iron-containing alcohol dehydrogenase (RefSeq), at 2,326,240 to 2,327,316
_1890
DvMF_1891: DvMF_1891 - Glutamine--scyllo-inositol transaminase (RefSeq), at 2,327,706 to 2,328,887
_1891
DvMF_1892: DvMF_1892 - CMP-N-acetylneuraminic acid synthetase (RefSeq), at 2,328,895 to 2,330,853
_1892
Position (kb)
2327
2328
2329 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2326.787 kb on - strand, within DvMF_1890 at 2326.834 kb on - strand, within DvMF_1890 at 2326.876 kb on + strand, within DvMF_1890 at 2327.023 kb on + strand, within DvMF_1890 at 2327.056 kb on + strand, within DvMF_1890 at 2327.160 kb on + strand, within DvMF_1890 at 2327.174 kb on + strand, within DvMF_1890 at 2327.196 kb on + strand, within DvMF_1890 at 2327.204 kb on - strand, within DvMF_1890 at 2327.255 kb on + strand at 2327.335 kb on - strand at 2327.405 kb on - strand at 2327.515 kb on - strand at 2327.552 kb on - strand at 2327.703 kb on - strand at 2327.749 kb on - strand at 2327.749 kb on - strand at 2327.798 kb on - strand at 2327.798 kb on - strand at 2327.967 kb on - strand, within DvMF_1891 at 2327.980 kb on - strand, within DvMF_1891 at 2328.146 kb on - strand, within DvMF_1891 at 2328.323 kb on + strand, within DvMF_1891 at 2328.393 kb on + strand, within DvMF_1891 at 2328.489 kb on - strand, within DvMF_1891 at 2328.681 kb on + strand, within DvMF_1891 at 2328.701 kb on + strand, within DvMF_1891 at 2328.875 kb on + strand at 2328.994 kb on - strand at 2329.048 kb on + strand at 2329.255 kb on - strand, within DvMF_1892 at 2329.336 kb on - strand, within DvMF_1892 at 2329.465 kb on + strand, within DvMF_1892 at 2329.480 kb on - strand, within DvMF_1892 at 2329.543 kb on - strand, within DvMF_1892 at 2329.579 kb on + strand, within DvMF_1892 at 2329.702 kb on - strand, within DvMF_1892
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Sisomicin 0.0156 mg/ml remove 2,326,787 - DvMF_1890 0.51 -1.8 2,326,834 - DvMF_1890 0.55 -1.9 2,326,876 + DvMF_1890 0.59 -2.0 2,327,023 + DvMF_1890 0.73 -2.3 2,327,056 + DvMF_1890 0.76 -3.3 2,327,160 + DvMF_1890 0.85 -1.9 2,327,174 + DvMF_1890 0.87 -1.5 2,327,196 + DvMF_1890 0.89 -1.8 2,327,204 - DvMF_1890 0.90 -2.2 2,327,255 + -1.5 2,327,335 - -1.2 2,327,405 - -0.4 2,327,515 - +1.2 2,327,552 - -0.4 2,327,703 - -1.6 2,327,749 - -3.5 2,327,749 - -1.3 2,327,798 - -2.4 2,327,798 - -1.6 2,327,967 - DvMF_1891 0.22 -1.9 2,327,980 - DvMF_1891 0.23 -0.9 2,328,146 - DvMF_1891 0.37 -1.7 2,328,323 + DvMF_1891 0.52 -1.9 2,328,393 + DvMF_1891 0.58 -2.0 2,328,489 - DvMF_1891 0.66 -3.0 2,328,681 + DvMF_1891 0.82 -1.5 2,328,701 + DvMF_1891 0.84 -1.6 2,328,875 + -0.4 2,328,994 - -1.7 2,329,048 + -1.9 2,329,255 - DvMF_1892 0.18 -1.4 2,329,336 - DvMF_1892 0.23 -2.1 2,329,465 + DvMF_1892 0.29 -2.2 2,329,480 - DvMF_1892 0.30 -1.1 2,329,543 - DvMF_1892 0.33 -2.6 2,329,579 + DvMF_1892 0.35 -0.6 2,329,702 - DvMF_1892 0.41 -2.6
Or see this region's nucleotide sequence