Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1458
Experiment: MoYLS4 with Sisomicin 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Sisomicin 0.0156 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,784,970 | + | DvMF_1457 | 0.13 | -1.4 | |
| 1,785,118 | + | DvMF_1457 | 0.35 | -3.0 | |
| 1,785,232 | - | DvMF_1457 | 0.51 | -1.6 | |
| 1,785,739 | - | -0.9 | |||
| 1,785,846 | + | DvMF_1458 | 0.11 | -1.1 | |
| 1,786,024 | - | DvMF_1458 | 0.18 | -2.4 | |
| 1,786,148 | - | DvMF_1458 | 0.23 | -3.5 | |
| 1,786,283 | + | DvMF_1458 | 0.28 | -3.9 | |
| 1,786,399 | - | DvMF_1458 | 0.32 | -2.9 | |
| 1,787,201 | + | DvMF_1458 | 0.64 | -0.6 | |
| 1,787,708 | + | DvMF_1458 | 0.84 | -0.9 | |
| 1,787,724 | + | DvMF_1458 | 0.85 | -2.9 | |
| 1,787,830 | - | DvMF_1458 | 0.89 | -4.9 | |
| 1,787,872 | + | -2.5 | |||
| 1,787,994 | - | -2.8 | |||
| 1,788,260 | + | -0.3 | |||
| 1,788,696 | + | DvMF_1459 | 0.52 | -0.3 | |
| 1,788,709 | - | DvMF_1459 | 0.53 | -0.1 | |
| 1,788,709 | - | DvMF_1459 | 0.53 | -0.8 | |
| 1,789,006 | + | DvMF_1459 | 0.84 | -0.6 |
Or see this region's nucleotide sequence