Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1425
Experiment: MoYLS4 with Sisomicin 0.0156 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Sisomicin 0.0156 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,742,691 | + | -2.0 | |||
1,742,777 | - | pyrB | DvMF_1425 | 0.15 | -1.0 |
1,742,886 | + | pyrB | DvMF_1425 | 0.26 | -1.0 |
1,742,904 | - | pyrB | DvMF_1425 | 0.28 | -2.0 |
1,743,023 | - | pyrB | DvMF_1425 | 0.40 | -1.3 |
1,743,083 | - | pyrB | DvMF_1425 | 0.47 | -1.1 |
1,743,091 | + | pyrB | DvMF_1425 | 0.47 | -0.7 |
1,743,151 | - | pyrB | DvMF_1425 | 0.54 | -1.3 |
1,743,176 | - | pyrB | DvMF_1425 | 0.56 | -1.3 |
1,743,200 | - | pyrB | DvMF_1425 | 0.59 | -0.9 |
1,743,268 | - | pyrB | DvMF_1425 | 0.66 | -2.1 |
1,743,441 | - | pyrB | DvMF_1425 | 0.83 | -1.9 |
1,743,492 | + | pyrB | DvMF_1425 | 0.88 | -0.8 |
1,743,542 | - | -0.9 | |||
1,743,575 | - | -0.3 | |||
1,743,660 | + | -1.5 | |||
1,743,808 | + | DvMF_1426 | 0.16 | -1.3 | |
1,743,816 | + | DvMF_1426 | 0.17 | -1.3 | |
1,743,864 | + | DvMF_1426 | 0.21 | -1.3 | |
1,743,900 | + | DvMF_1426 | 0.23 | -2.1 | |
1,743,931 | - | DvMF_1426 | 0.26 | -2.1 | |
1,743,941 | - | DvMF_1426 | 0.27 | -1.1 | |
1,744,178 | - | DvMF_1426 | 0.45 | -2.1 | |
1,744,178 | - | DvMF_1426 | 0.45 | -0.7 | |
1,744,330 | + | DvMF_1426 | 0.57 | -0.9 |
Or see this region's nucleotide sequence